BAC Information

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BAC

Clone NameB6Ng01-050P18
Chromosome17 (Build37)
Map Location 4,797,776 - 4,798,878
singlet/doubletsinglet
Overlap genenone
Upstream gene4930470H14Rik
Downstream genePpia-ps17_26.1, Arid1b, 5730437N04Rik, Ldhal6b, LOC100040282, LOC666919, LOC100040312, Zdhhc14, 3300005D01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050P18.bB6Ng01-050P18.g
ACCDH874762DH874763
length1,0691,114
definitionDH874762|Mus musculus domesticus DNA, BAC clone: B6Ng01-050P18, 5' end.DH874763|Mus musculus domesticus DNA, BAC clone: B6Ng01-050P18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgagggcccaggagcctgtaggcactagtttctgtggtagagt
tgctacagtgagtcttttatccctagactggcccccagggcacaggcttg
gattgacagtaaacccatttcatggaacaggctaactcatatctacttgt
gtgatttttctagggtctttccttcctcatggggccatcagggacagctt
tgatttcatcatctcacttttattttcttttaatcacttattacatctct
atattcatccatgttataacacacgattataataggtttttactgccagg
tgtcacactctggagatacggtgcaacttatcagttatctgttttcctat
aaaaacacggtgggcagctttaccatggtcaactcctggcaaaattctag
gtcacaagggtgggaaaaatgggtcttcaataccttttatattttcccca
ttgtcattttcaggggccccagaagcatcctgctcagcacacagtacagt
agaacacatctatattgaactgatattgtaagtgacaggtaaaacccagg
gcaacttcagtcatgtttctacctagggcactgaggtaaagcattgcctc
attctggatcagtggaaagggtaccaggatgaagaccaataaccaatgac
ccatgtctgtgtagctggagaaagtgggctctcagaagtcacttcccaat
aacccagcttccctcttggacttgtaggaaccagacagatccatgggtat
agttgaaaagcaaatggaatgaacattctattgtggatgtttagttttcc
ccagcctgaggatgagctttgagtgatggtatttggcactgaaaatgatg
ctatatacgtgttccttccacatacatacttttaaagtattgattgatta
taatatttacatcctgatactgctctctcttcgtgccccctcacagcgtc
ctttcactttttctctgagaggtagagctccacctggtatctcccacctg
gccatcagtctctgcaggctaggccatcctctcccactgagcagacagca
gccagtaggaacggatcca
gaattcttacctgaggaatatcaaatggctgagaagcacctgaataaatg
gtcagcatccttaatcatcagggaaatgtaaatcaaaacaaccctgagat
tccacctcacacaagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatatggagaaagaggaacactcctccattgttggtg
ggattgcaagcttatacaaccactctggaaatcagtctggcagttcctca
aaaaattggacttagtactactggaggatcccacaatacctctcctgggc
atatacccagaagatgttccaactggtaataaggatacatgttccaccat
gttcatagcagtcatatttataatagccagaaactggaaagaacccagat
gtccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatagacctggagggtatcatcctgagtgaggtaacccaatcacaaa
agaactcacatgatatgtactcactgataagtggatattagcccagaaac
ttagaatacccatgatacaagatacaatttgcaaaacacatggaactcaa
gaagaaggaagaacaaagtgtggacactttgccccttcttggaattgaga
acaaaacacccatggaaggagttacaaagacaaatttggagctgagacaa
aaggatggaccatctagagattgcaacacccggtgatccatcccataatt
tgtctccaaacgctgacaccaggaccctgatatagctgtctcttgagagg
ttatgatggtgcctggcaaacacagatgtggatgctctcagtcagctatt
ggatggatatagggccccatgagagctagagaagtaacagagctaaaagg
tctgcactatagtagacacaatatgactacagtacccccggagctttttt
ctctagctatgtctctagctgcatagtagcaaagaatggcatcatggcag
agagcctgtttgcaacttttatatgctcagtacagggatgctagtcaaag
tgaaatggggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_4797776_4798878
seq2: B6Ng01-050P18.b_48_1116 (reverse)

seq1  TGGATCCGTTCCCCTAACTGGGCTGCCTTGTCTGGCCTCAGTGGGAGAGG  50
      ||||||||||||    ||| ||||||  ||||||  ||||||||||||||
seq2  TGGATCCGTTCC---TACT-GGCTGC--TGTCTG--CTCAGTGGGAGAGG  42

seq1  ATGTGCCTAGCCCTGCAGAGACTTGATGTGCCAGGGTGGGGAGATAACCA  100
      ||| |||||| ||||||||||| ||||| ||||||   ||||||||  | 
seq2  ATG-GCCTAG-CCTGCAGAGAC-TGATG-GCCAGG--TGGGAGATA--CC  84

seq1  AGGTGGAGCTTCTACCCTCTCAGAGAAAAAGTGGAAAAGGACGCTGTGAG  150
      ||||||||| |||| ||||||||||||||||||  |||||||||||||||
seq2  AGGTGGAGC-TCTA-CCTCTCAGAGAAAAAGTG--AAAGGACGCTGTGAG  130

seq1  GGGGCACCGGAAGGAGAAGAG-GCAGTAATCAGGATGTAAATTAATTAAT  199
      |||||||  ||||    |||| ||||| ||||||||||||||  ||||  
seq2  GGGGCAC--GAAG----AGAGAGCAGT-ATCAGGATGTAAAT--ATTA--  169

seq1  TAATCAATCAATTAACTTTAAAAGTATGTATGTGGAAGGAACACCGTATA  249
      ||||||||||||  ||||||||||||||||||||||||||||| ||||||
seq2  TAATCAATCAAT--ACTTTAAAAGTATGTATGTGGAAGGAACA-CGTATA  216

seq1  TAGCATCATTTTCAGTGCCAAATACCATCACTCAAAGCTCATCCTCAGGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATCATTTTCAGTGCCAAATACCATCACTCAAAGCTCATCCTCAGGC  266

seq1  TGGGGAAAAACTAAACATCCACAATAGAATGTTCATTCCATTTGCTTTTC  349
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGG-AAAACTAAACATCCACAATAGAATGTTCATTCCATTTGCTTTTC  315

seq1  AACTATACCCATGGATCTGTCTGGTTCCTACAAGTCCAAGAGGGAAGCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATACCCATGGATCTGTCTGGTTCCTACAAGTCCAAGAGGGAAGCTG  365

seq1  GGTTATTGGGAAGTGACTTCTGAGAGCCCACTTTCTCCAGCTACACAGAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTGGGAAGTGACTTCTGAGAGCCCACTTTCTCCAGCTACACAGAC  415

seq1  ATGGGTCATTGGTTATTGGTCTTCATCCTGGTACCCTTTCCACTGATCCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTCATTGGTTATTGGTCTTCATCCTGGTACCCTTTCCACTGATCCA  465

seq1  GAATGAGGCAATGCTTTACCTCAGTGCCCTAGGTAGAAACATGACTGAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGGCAATGCTTTACCTCAGTGCCCTAGGTAGAAACATGACTGAAG  515

seq1  TTGCCCTGGGTTTTACCTGTCACTTACAATATCAGTTCAATATAGATGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCTGGGTTTTACCTGTCACTTACAATATCAGTTCAATATAGATGTG  565

seq1  TTCTACTGTACTGTGTGCTGAGCAGGATGCTTCTGGGGCCCCTGAAAATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTGTACTGTGTGCTGAGCAGGATGCTTCTGGGGCCCCTGAAAATG  615

seq1  ACAATGGGGAAAATATAAAAGGTATTGAAGACCCATTTTTCCCACCCTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGGGAAAATATAAAAGGTATTGAAGACCCATTTTTCCCACCCTTG  665

seq1  TGACCTAGAATTTTGCCAGGAGTTGACCATGGTAAAGCTGCCCACCGTGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTAGAATTTTGCCAGGAGTTGACCATGGTAAAGCTGCCCACCGTGT  715

seq1  TTTTATAGGAAAACAGATAACTGATAAGTTGCACCGTATCTCCAGAGTGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAGGAAAACAGATAACTGATAAGTTGCACCGTATCTCCAGAGTGT  765

seq1  GACACCTGGCAGTAAAAACCTATTATAATCGTGTGTTATAACATGGATGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCTGGCAGTAAAAACCTATTATAATCGTGTGTTATAACATGGATGA  815

seq1  ATATAGAGATGTAATAAGTGATTAAAAGAAAATAAAAGTGAGATGATGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAGATGTAATAAGTGATTAAAAGAAAATAAAAGTGAGATGATGAA  865

seq1  ATCAAAGCTGTCCCTGATGGCCCCATGAGGAAGGAAAGACCCTAGAAAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGCTGTCCCTGATGGCCCCATGAGGAAGGAAAGACCCTAGAAAAA  915

seq1  TCACACAAGTAGATATGAGTTAGCCTGTTCCATGAAATGGGTTTACTGTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAAGTAGATATGAGTTAGCCTGTTCCATGAAATGGGTTTACTGTC  965

seq1  AATCCAAGCCTGTGCCCTGGGGGCCAGTCTAGGGATAAAAGACTCACTGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAAGCCTGTGCCCTGGGGGCCAGTCTAGGGATAAAAGACTCACTGT  1015

seq1  AGCAACTCTACCACAGAAACTAGTGCCTACAGGCTCCTGGGCCCTCAAGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTCTACCACAGAAACTAGTGCCTACAGGCTCCTGGGCCCTCAAGA  1065

seq1  ATTC  1103
      ||||
seq2  ATTC  1069