BAC Information

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BAC

Clone NameB6Ng01-051A16
Chromosome17 (Build37)
Map Location 79,110,490 - 79,170,642
singlet/doubletdoublet
Overlap geneStrn, Heatr5b
Upstream geneLOC668795, LOC383275, Crim1, Fez2, LOC100043888, Hdac1-ps, Vit
Downstream gene2310002B06Rik, EG625054, Eif2ak2, 2410078J06Rik, Cebpz, 2410091C18Rik, Prkcn, LOC675425, Qpct, LOC668812, LOC383277, Cdc42ep3, LOC639964, AW061290, Cyp1b1, EG668821
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051A16.bB6Ng01-051A16.g
ACCDH874802DH874803
length2571,038
definitionDH874802|Mus musculus domesticus DNA, BAC clone: B6Ng01-051A16, 5' end.DH874803|Mus musculus domesticus DNA, BAC clone: B6Ng01-051A16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,110,490 - 79,110,746)(79,169,605 - 79,170,642)
sequence
gaattcaaaaatgttcctatgcctgaaattttctgaacatcagaacacat
cttggatttcagactttcagaatagggatgttcagccagtaaagtctatg
taaatcttccaaaattaaaatatctatgaatttttaaacacatttgggcc
aagaatttcaggtacagttgaacatgagatacaaattttctatccctaac
caggttcatctatatgtatatgtagttttttttttttttttggtttttcg
agacagg
gaattccactatctccacttccttagttttcattccattgagattacgtc
cactaaagccacggataacaatgattaccttagagcttgtcttacttggc
cttaaggcttgtgcctctcccagtgcacaatcagaagaatgacgtctcaa
ggaagcccttgtatgttacttccattgagagccgtcagaacacttgcctt
cactgaccccggaactccttgcctgatccttccttctggcagagaagtca
gttcatcgctttgtttgctttcagtgttatctaacacgaagaggtaaatg
tactttgctgtgggcttaagttctttgattgcctaggcctttaattagaa
gaaaacatgaaatttgttcaactgtagggaaattagtggacacattatgg
tctatgcagtgtagccattgagatatgattatgaagagtgaaaaaacttc
atattaacttgtaaaattaaagagtcctctgtacagcaaatttataactt
acaaagagagaacatggaaatgagtgttgagattatgaggcatttttcgg
ctcttatgtgctaatatttttttgaagtaatgtcttactatgtagccctg
gctagcctagaactcatagaccaggctgaactcaaacttgtagtgatttt
ccaggttcagtctcctgagtactggggttacaagtgtgtgctatcatgtg
cagctttttattcccccagcctcttacagcacagttattaaaatgaaagc
tataggagaatccatatacctgctatgaaaacccctgcagtggctcctcg
cttgttgcctcccgtgctcagtgctggaaccagcacagcctgagcaccac
acatgccttgctctcctgctcctgtgctcgttgctccttctacttctgag
ggattgtccatctgtccacactccgccctgctgtggttatcgtgtgccct
tcttctgtgctccctcagtttgctcattcatcctgaagcatcagttgttc
agtaaagacagaatactgggggggtggtggtagggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_79110490_79110746
seq2: B6Ng01-051A16.b_29_285

seq1  GAATTCAAAAATGTTCCTATGCCTGAAATTTTCTGAACATCAGAACACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAATGTTCCTATGCCTGAAATTTTCTGAACATCAGAACACAT  50

seq1  CTTGGATTTCAGACTTTCAGAATAGGGATGTTCAGCCAGTAAAGTCTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGATTTCAGACTTTCAGAATAGGGATGTTCAGCCAGTAAAGTCTATG  100

seq1  TAAATCTTCCAAAATTAAAATATCTATGAATTTTTAAACACATTTGGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTTCCAAAATTAAAATATCTATGAATTTTTAAACACATTTGGGCC  150

seq1  AAGAATTTCAGGTACAGTTGAACATGAGATACAAATTTTCTATCCCTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTCAGGTACAGTTGAACATGAGATACAAATTTTCTATCCCTAAC  200

seq1  CAGGTTCATCTATATGTATATGTAGTTTTTTTTTTTTTTTTGGTTTTTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCATCTATATGTATATGTAGTTTTTTTTTTTTTTTTGGTTTTTCG  250

seq1  AGACAGG  257
      |||||||
seq2  AGACAGG  257

seq1: chr17_79169605_79170642
seq2: B6Ng01-051A16.g_65_1102 (reverse)

seq1  ACTCCCTACCAC--ACCCCCCAGTATCTGGTCTTTACTGAACACCTGATG  48
      ||||||||||||   |||||||||||   |||||||||||||| ||||| 
seq2  ACTCCCTACCACCACCCCCCCAGTATTCTGTCTTTACTGAACAACTGAT-  49

seq1  GCTTCAGGATGAATGAGCAAACCTGAGGGAGCACAGAAGAAGGGCACACG  98
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GCTTCAGGATGAATGAGCAAA-CTGAGGGAGCACAGAAGAAGGGCACACG  98

seq1  ATAACCACAGCAGGGCGGAGTGTGGACAGATGGACATTCCCTCAGAGGTA  148
      |||||||||||||||||||||||||||||||||||| ||||||||| |||
seq2  ATAACCACAGCAGGGCGGAGTGTGGACAGATGGACAATCCCTCAGAAGTA  148

seq1  GAAGGAGCAACGAGCACAGGAGCAGGAGAGCAAGGCATGTGTGGTGCTCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGCAACGAGCACAGGAGCAGGAGAGCAAGGCATGTGTGGTGCTCA  198

seq1  GGCTGTGCTGGTTCCAGCACTGAGCACGGGAGGCAACAAGCGAGGAGCCA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGCTGGTTCCAGCACTGAGCACGGGAGGCAACAAGCGAGGAGCCA  248

seq1  CTGCAGGGGTTTTCATAGCAGGTATATGGATTCTCCTATAGCTTTCATTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGGGGTTTTCATAGCAGGTATATGGATTCTCCTATAGCTTTCATTT  298

seq1  TAATAACTGTGCTGTAAGAGGCTGGGGGAATAAAAAGCTGCACATGATAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACTGTGCTGTAAGAGGCTGGGGGAATAAAAAGCTGCACATGATAG  348

seq1  CACACACTTGTAACCCCAGTACTCAGGAGACTGAACCTGGAAAATCACTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACTTGTAACCCCAGTACTCAGGAGACTGAACCTGGAAAATCACTA  398

seq1  CAAGTTTGAGTTCAGCCTGGTCTATGAGTTCTAGGCTAGCCAGGGCTACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTGAGTTCAGCCTGGTCTATGAGTTCTAGGCTAGCCAGGGCTACA  448

seq1  TAGTAAGACATTACTTCAAAAAAATATTAGCACATAAGAGCCGAAAAATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAGACATTACTTCAAAAAAATATTAGCACATAAGAGCCGAAAAATG  498

seq1  CCTCATAATCTCAACACTCATTTCCATGTTCTCTCTTTGTAAGTTATAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATAATCTCAACACTCATTTCCATGTTCTCTCTTTGTAAGTTATAAA  548

seq1  TTTGCTGTACAGAGGACTCTTTAATTTTACAAGTTAATATGAAGTTTTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGTACAGAGGACTCTTTAATTTTACAAGTTAATATGAAGTTTTTT  598

seq1  CACTCTTCATAATCATATCTCAATGGCTACACTGCATAGACCATAATGTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTCATAATCATATCTCAATGGCTACACTGCATAGACCATAATGTG  648

seq1  TCCACTAATTTCCCTACAGTTGAACAAATTTCATGTTTTCTTCTAATTAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTAATTTCCCTACAGTTGAACAAATTTCATGTTTTCTTCTAATTAA  698

seq1  AGGCCTAGGCAATCAAAGAACTTAAGCCCACAGCAAAGTACATTTACCTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTAGGCAATCAAAGAACTTAAGCCCACAGCAAAGTACATTTACCTC  748

seq1  TTCGTGTTAGATAACACTGAAAGCAAACAAAGCGATGAACTGACTTCTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTGTTAGATAACACTGAAAGCAAACAAAGCGATGAACTGACTTCTCT  798

seq1  GCCAGAAGGAAGGATCAGGCAAGGAGTTCCGGGGTCAGTGAAGGCAAGTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAAGGAAGGATCAGGCAAGGAGTTCCGGGGTCAGTGAAGGCAAGTG  848

seq1  TTCTGACGGCTCTCAATGGAAGTAACATACAAGGGCTTCCTTGAGACGTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACGGCTCTCAATGGAAGTAACATACAAGGGCTTCCTTGAGACGTC  898

seq1  ATTCTTCTGATTGTGCACTGGGAGAGGCACAAGCCTTAAGGCCAAGTAAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTGATTGTGCACTGGGAGAGGCACAAGCCTTAAGGCCAAGTAAG  948

seq1  ACAAGCTCTAAGGTAATCATTGTTATCCGTGGCTTTAGTGGACGTAATCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTCTAAGGTAATCATTGTTATCCGTGGCTTTAGTGGACGTAATCT  998

seq1  CAATGGAATGAAAACTAAGGAAGTGGAGATAGTGGAATTC  1038
      ||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAATGAAAACTAAGGAAGTGGAGATAGTGGAATTC  1038