BAC Information

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BAC

Clone NameB6Ng01-057P08
Chromosome17 (Build37)
Map Location 37,616,955 - 37,760,593
singlet/doubletdoublet
Overlap geneH2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115
Upstream geneH2-M11, LOC667896, H2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109
Downstream geneOlfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057P08.bB6Ng01-057P08.g
ACCDH879667DH879668
length1,083740
definitionDH879667|Mus musculus domesticus DNA, BAC clone: B6Ng01-057P08, 5' end.DH879668|Mus musculus domesticus DNA, BAC clone: B6Ng01-057P08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,759,499 - 37,760,593)(37,616,955 - 37,617,690)
sequence
gaattctttcaaattctaatgttaatgaaagacaatgtattggttttttt
ctgtaaactacattatgtaacaattgtccttgcaaaagtacaatgtctta
ttactttgcattttaatataaaaactattgttccttcatattaataaaac
tattaaaagctttgtaatagagatccactacttacatcctaatgcatcta
cacagaaagacacacacacacacacatacacacacacacacacacacaca
cacacacacacacacacacactgacattctcagtatatttcttaagactt
tattaagacttttgcagagggaatattacaataataaaaataataaagtg
atatgattagctccttttccacataccaattcacaatttttaggtcaact
ctttatctttcaacttttatgttaaatttatttttaactatcaagataca
tattgatataaatgtatatcactaggtaaacttgcattgttataattttc
ctaaagtactgttttcaattcatttgcatatattcactgtcttttgcctt
tatagtcaatagtattataagtaatattaaaaattcaagttttgtctata
taattctaaaaaataggtttattaatcaaagtatgcctggagcattccac
cctgtagtgtgttgaaaggagacacagagtcagactcaaatgtagcttta
aagactcattttctccagaagctcaagcttgctaactatactaaatattt
gttgatagtttctaaaagtcctaaaaatttctagctcttccctgagggtt
aaaagccactggcttaggtgttaatacatgtagcataaagagtggggaga
agaaggaatgggattaattgttagagacatttcctcttttatcccaaatg
cctctttccttgtcaggctaggggaaagtttggagcaagaaatttctatt
gaacaagagaaaaggaatcatgcttgcacaggaaaaaacttttatacagc
aatatggataaactccaaaattcatatatagaatcatgctaaaatttctt
atctcttctgggccagctactgcatctcataat
gaattcatgaatcatccttgatctaaccctgcaatactcctctctcacat
aaagtttagtagttttagttttaactgtctcttactctgttacctgccat
ggatccccttcctctaattggaatgtctggttgggtctactgggagaggg
tgcatttagtcctactgtgactggatgtctcagggttgggttcccaatga
aaatttccctttctctgagaagaaggagagggagtttatgggggagagat
ttgcaagggttggactgggagagaagagaaactaggggtgttcgattggc
atataaagtgaataaataaattaataaaaagaaagcaaggataaacaaaa
caatcttcagcatcatataaaaagtatgatttatttcattcttacatcat
ttctaacaatggaggctcgaattgtgtaaaagtttttctgagggttctaa
cagtttacatatttggcaaaattgagttagtgaagatgcgttacagtgtg
gactttgtgagcatggcacagtatgaaagactaaaatgttcttaactact
ggagatgtacttttggtgtgtttccatgtgtgtagataaaatttatcaaa
gatcttgggtcttttgatgactgggtattggtagcactccactatggaat
tttattaatatttcccagaagacttatattgtctgtactactattttcag
acaaatgccatttttgatgctccctgcacataactgacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37759499_37760593
seq2: B6Ng01-057P08.b_44_1126 (reverse)

seq1  ATTATGAGAATGCATGTAAGCTAGGCCCAGAATGGAGATTAAGAAATTTT  50
      |||||||| ||||| || |||| |||||||||  |||| |||||||||||
seq2  ATTATGAG-ATGCA-GT-AGCT-GGCCCAGAA--GAGA-TAAGAAATTTT  43

seq1  TATGCATGATTCTATATATGAATTTATGTGAGTTTAATCCATATTTGCTT  100
         |||||||||||||||||||||| || |||||| ||||||| |||| |
seq2  --AGCATGATTCTATATATGAATTT-TG-GAGTTT-ATCCATA-TTGC-T  86

seq1  GTATAAAAGGTTTTTTCCTTGTGCAAGCATGA-TCCTTTTCTCCTTGTTC  149
      |||||||| ||||||||| ||||||||||||| ||||||||| |||||||
seq2  GTATAAAA-GTTTTTTCC-TGTGCAAGCATGATTCCTTTTCT-CTTGTTC  133

seq1  AATAGAAATTTACTGCTCCAAACTTTCCCCTAGCCTGACAAGG-AAGAGG  198
      |||||||||||  |||||||||||||||||||||||||||||| ||||||
seq2  AATAGAAATTTCTTGCTCCAAACTTTCCCCTAGCCTGACAAGGAAAGAGG  183

seq1  CATTT-GGATAAAAG-GGAAATGTCTCTAACAATTAAT-CCATTACTTCT  245
      ||||| ||||||||| |||||||||||||||||||||| ||||| |||||
seq2  CATTTGGGATAAAAGAGGAAATGTCTCTAACAATTAATCCCATTCCTTCT  233

seq1  TCT-CCCACTC-TTATGCTACATGTATTAATCACCTAAGCCAGTGGCTTT  293
      ||| ||||||| |||||||||||||||||| |||||||||||||||||||
seq2  TCTCCCCACTCTTTATGCTACATGTATTAA-CACCTAAGCCAGTGGCTTT  282

seq1  TAACCCTCA-GGAAGAGCTAGAAAGTTTTTAGGACTTTTTAGAAACTATC  342
      ||||||||| |||||||||||||| |||||||||| ||||||||||||||
seq2  TAACCCTCAGGGAAGAGCTAGAAA-TTTTTAGGAC-TTTTAGAAACTATC  330

seq1  AACAAATATTTAGTATAGTTAGCAAGCTTGAGCTTCTGGAGAAAATGAGT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATATTTAGTATAGTTAGCAAGCTTGAGCTTCTGGAGAAAATGAGT  380

seq1  CTTTAAAGCTACATTTGAGTCTGACTCTGTGTCTCCTTTCAACACACTAC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAGCTACATTTGAGTCTGACTCTGTGTCTCCTTTCAACACACTAC  430

seq1  AGGGTGGAATGCTCCAGGCATACTTTGATTAATAAACCTATTTTTTAGAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGAATGCTCCAGGCATACTTTGATTAATAAACCTATTTTTTAGAA  480

seq1  TTATATAGACAAAACTTGAATTTTTAATATTACTTATAATACTATTGACT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAGACAAAACTTGAATTTTTAATATTACTTATAATACTATTGACT  530

seq1  ATAAAGGCAAAAGACAGTGAATATATGCAAATGAATTGAAAACAGTACTT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGCAAAAGACAGTGAATATATGCAAATGAATTGAAAACAGTACTT  580

seq1  TAGGAAAATTATAACAATGCAAGTTTACCTAGTGATATACATTTATATCA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAAATTATAACAATGCAAGTTTACCTAGTGATATACATTTATATCA  630

seq1  ATATGTATCTTGATAGTTAAAAATAAATTTAACATAAAAGTTGAAAGATA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTATCTTGATAGTTAAAAATAAATTTAACATAAAAGTTGAAAGATA  680

seq1  AAGAGTTGACCTAAAAATTGTGAATTGGTATGTGGAAAAGGAGCTAATCA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTGACCTAAAAATTGTGAATTGGTATGTGGAAAAGGAGCTAATCA  730

seq1  TATCACTTTATTATTTTTATTATTGTAATATTCCCTCTGCAAAAGTCTTA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACTTTATTATTTTTATTATTGTAATATTCCCTCTGCAAAAGTCTTA  780

seq1  ATAAAGTCTTAAGAAATATACTGAGAATGTCAGTGTGTGTGTGTGTGTGT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTCTTAAGAAATATACTGAGAATGTCAGTGTGTGTGTGTGTGTGT  830

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTCTTTCT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTCTTTCT  880

seq1  GTGTAGATGCATTAGGATGTAAGTAGTGGATCTCTATTACAAAGCTTTTA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGATGCATTAGGATGTAAGTAGTGGATCTCTATTACAAAGCTTTTA  930

seq1  ATAGTTTTATTAATATGAAGGAACAATAGTTTTTATATTAAAATGCAAAG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTTATTAATATGAAGGAACAATAGTTTTTATATTAAAATGCAAAG  980

seq1  TAATAAGACATTGTACTTTTGCAAGGACAATTGTTACATAATGTAGTTTA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGACATTGTACTTTTGCAAGGACAATTGTTACATAATGTAGTTTA  1030

seq1  CAGAAAAAAACCAATACATTGTCTTTCATTAACATTAGAATTTGAAAGAA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAAAACCAATACATTGTCTTTCATTAACATTAGAATTTGAAAGAA  1080

seq1  TTC  1095
      |||
seq2  TTC  1083

seq1: chr17_37616955_37617690
seq2: B6Ng01-057P08.g_69_808

seq1  GAATTCATGAATCATCCTTGATCTAACCCTGCAATACTCCTCTCTCACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAATCATCCTTGATCTAACCCTGCAATACTCCTCTCTCACAT  50

seq1  AAAGTTTAGTAGTTTTAGTTTTAACTGTCTCTTACTCTGTTACCTGCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTAGTAGTTTTAGTTTTAACTGTCTCTTACTCTGTTACCTGCCAT  100

seq1  GGATCCCCTTCCTCTAATTGGAATGTCTGGTTGGGTCTACTGGGAGAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCCCTTCCTCTAATTGGAATGTCTGGTTGGGTCTACTGGGAGAGGG  150

seq1  TGCATTTAGTCCTACTGTGACTGGATGTCTCAGGGTTGGGTTCCCAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTAGTCCTACTGTGACTGGATGTCTCAGGGTTGGGTTCCCAATGA  200

seq1  AAATTTCCCTTTCTCTGAGAAGAAGGAGAGGGAGTTTATGGGGGAGAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCCCTTTCTCTGAGAAGAAGGAGAGGGAGTTTATGGGGGAGAGAT  250

seq1  TTGCAAGGGTTGGACTGGGAGAGAAGAGAAACTAGGGGTGTTCGATTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAGGGTTGGACTGGGAGAGAAGAGAAACTAGGGGTGTTCGATTGGC  300

seq1  ATATAAAGTGAATAAATAAATTAATAAAAAGAAAGCAAGGATAAACAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAGTGAATAAATAAATTAATAAAAAGAAAGCAAGGATAAACAAAA  350

seq1  CAATCTTCAGCATCATATAAAAAGTATGATTTATTTCATTCTTACATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTTCAGCATCATATAAAAAGTATGATTTATTTCATTCTTACATCAT  400

seq1  TTCTAACAATGGAGGCTCGAATTGTGTAAAAGTTTTTCTGAGGGTTCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAACAATGGAGGCTCGAATTGTGTAAAAGTTTTTCTGAGGGTTCTAA  450

seq1  CAGTTTACATATTTGGCAAAATTGAGTTAGTGAAGATGCGTTACAGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTACATATTTGGCAAAATTGAGTTAGTGAAGATGCGTTACAGTGTG  500

seq1  GACTTTGTGAGCATGGCACAGTATGAAAGACTAAAATGTTCTTAACTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTGTGAGCATGGCACAGTATGAAAGACTAAAATGTTCTTAACTACT  550

seq1  GGAGATGTACTTTTGGTGTGTTTCCATGTGTGTAGATAAAATTTATC-AA  599
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGAGATGTACTTTTGGTGTGTTTCCATGTGTGTAGATAAAATTTATCAAA  600

seq1  GATCTTGGGTCTTTTGATGACTGGGTATTGGTAGCACTCCACTATGGAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTGGGTCTTTTGATGACTGGGTATTGGTAGCACTCCACTATGGAAT  650

seq1  TTTATTAATA-TTCCCAGAAGACTTATATTGTCTGTACTACTA-TTTCAG  697
      |||||||||| |||||||||||||||||||||||||||||||| ||||||
seq2  TTTATTAATATTTCCCAGAAGACTTATATTGTCTGTACTACTATTTTCAG  700

seq1  ACAAATGCCA-GTATGATGCTCCCTGCACATAACTGACAA  736
      ||||||||||  | ||||||||||||||||||||||||||
seq2  ACAAATGCCATTTTTGATGCTCCCTGCACATAACTGACAA  740