BAC Information

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BAC

Clone NameB6Ng01-058O21
Chromosome17 (Build37)
Map Location 81,477,706 - 81,478,852
singlet/doubletsinglet
Overlap genenone
Upstream geneGalm, Sfrs7, 4930560E09Rik, Gemin6, Dhx57, Morn2, Sos1, Cdkl4, F420015M19Rik, Map4k3, LOC100043697, C230072F16Rik, LOC675572, EG668830, Tmem178, Thumpd2
Downstream geneLOC100043700, LOC100043704, Slc8a1, EG668832, LOC100043707
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058O21.bB6Ng01-058O21.g
ACCDH880372DH880373
length8391,137
definitionDH880372|Mus musculus domesticus DNA, BAC clone: B6Ng01-058O21, 5' end.DH880373|Mus musculus domesticus DNA, BAC clone: B6Ng01-058O21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgcagttgaatccttctcaacagtctgttttacgggaaccttt
attaccgtgacccgcagttctggttctggaatgagggatcttccttgcgc
cggtcccgagttttcttgtattttttcgtcccggatttcagcaccaactc
ttatacgcgttctcacgaccggccaggaaagaacacaacaaaccagaatc
ttctgcggcaaaactttattgcttacatcttcaggagcaggagcgcaagc
cccaagccccaaaaacgaaagcgcccctctaaacatctttaggagccaga
gcacaccagagcgccagagcgcagagcaagagctctattgtttacatctt
taggagcaagcgagcaggcgccagagccagagagcaaaagcgcaagagcg
caagtaagagagagaatggcggaaaccccgtcccctttaaggaggagtta
tccttcgcctaggacgcatcactccctgattggctgcagcccatgaccga
gttgttgccacgggaaaggcagagtacgtgtagtggtaaaatacccttgg
cacatgcgcagattatttgtttaccacttagaacacaggatgtcagcgcc
atcttgtgacggcgaatgtgggggcggctcccaacaattagatccccttc
ccctagctggactgcctggttggacctcagtgtgagaggatgtgcttagt
cctgctacgatttggtgtcccagggtgaaatgttacccatggtgattttt
cccttttcttcagagaaagggagctatatttgtgagagggaggcatttat
gagggtaggactgggaggagcagagtgaggggggactgt
gaattcaaggctagcctggcctatatatgaagttctaggccagtcagagc
tacacagtaagaccctgcctcaggaacagccacaggggctctctagcttt
ggtcttgagtaacactggcacttgcttgttgccatctcaacacacaagtt
ctttaggagacagtgggcaaatctgtaactagctatcctttggattattt
tttctaaagaaatatctgtgaatttgtttgtttctttgattgttctttag
tgtagaatagagtttattcagggcatgggaacaggaatggagagatggaa
aaagggaagcagaggaagagcaagagagcaagatatgagcaagggtggtt
tttgttttttattatacttggggaaggtgaaagacaacagttacctaaga
tcacaaagaaagttactgcttaaaaacaggcacaaagaggaatacagttt
cgctttcagtcaaagcaagaatctgccttgagagaaaacctgagaagtct
ctggaggtcctcaccttccaggaacatggtctagggttgacacctgccac
agggcgtgttgtcagtctgtgctcttgtgaagtgagaggagaaggaaggg
tggctgttggagggcctcacattccagtctttatccctgagtgacagcga
tgaccttctggtctgaagttttatggcacaaaatgaaaactgtttatctt
gcccaggcttccacatctgacacaggcaactcattcgacttcacatcccg
gataaagtgtaaacaggagtgggatgatatacgtccccagggacaagttt
gagaaatagctatcacccttgtaaacatcctcccccttttaatatatgct
cctcctgattgttctaatgctgtagtgccagcattgtctctaaaactgag
attctatggcatgacaatattttttatttgataaatatttcagtaataaa
tgtcagaaagaaattacataaactccaagttgctggtggttgcttcagtg
attttggaaatgactgtcctatccacttggtctcgggtatgtccatttaa
taaacaaatatagaaaacaagaaaaacttttttcatgatcttaaaaaagt
aggctgaagccgggggtgggggcgcatgaccttaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_81477706_81478852
seq2: B6Ng01-058O21.g_68_1204

seq1  GAATTCAAGGCTAGCCTGGCCTATATATGAAGTTCTAGGCCAGTCAGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCTAGCCTGGCCTATATATGAAGTTCTAGGCCAGTCAGAGC  50

seq1  TACACAGTAAGACCCTGCCTCAGGAACAGCCACAGGGGCTCTCTAGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGTAAGACCCTGCCTCAGGAACAGCCACAGGGGCTCTCTAGCTTT  100

seq1  GGTCTTGAGTAACACTGGCACTTGCTTGTTGCCATCTCAACACACAAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTGAGTAACACTGGCACTTGCTTGTTGCCATCTCAACACACAAGTT  150

seq1  CTTTAGGAGACAGTGGGCAAATCTGTAACTAGCTATCCTTTGGATTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGGAGACAGTGGGCAAATCTGTAACTAGCTATCCTTTGGATTATTT  200

seq1  TTTCTAAAGAAATATCTGTGAATTTGTTTGTTTCTTTGATTGTTCTTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAAGAAATATCTGTGAATTTGTTTGTTTCTTTGATTGTTCTTTAG  250

seq1  TGTAGAATAGAGTTTATTCAGGGCATGGGAACAGGAATGGAGAGATGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAATAGAGTTTATTCAGGGCATGGGAACAGGAATGGAGAGATGGAA  300

seq1  AAAGGGAAGCAGAGGAAGAGCAAGAGAGCAAGATATGAGCAAGGGTGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAAGCAGAGGAAGAGCAAGAGAGCAAGATATGAGCAAGGGTGGTT  350

seq1  TTTGTTTTTTATTATACTTGGGGAAGGTGAAAGACAACAGTTACCTAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTTATTATACTTGGGGAAGGTGAAAGACAACAGTTACCTAAGA  400

seq1  TCACAAAGAAAGTTACTGCTTAAAAACAGGCACAAAGAGGAATACAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAAGAAAGTTACTGCTTAAAAACAGGCACAAAGAGGAATACAGTTT  450

seq1  CGCTTTCAGTCAAAGCAAGAATCTGCCTTGAGAGAAAACCTGAGAAGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTCAGTCAAAGCAAGAATCTGCCTTGAGAGAAAACCTGAGAAGTCT  500

seq1  CTGGAGGTCCTCACCTTCCAGGAACATGGTCTAGGGTTGACACCTGCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGTCCTCACCTTCCAGGAACATGGTCTAGGGTTGACACCTGCCAC  550

seq1  AGGGCGTGTTGTCAGTCTGTGCTCTTGTGAAGTGAGAGGAGAAGGAAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCGTGTTGTCAGTCTGTGCTCTTGTGAAGTGAGAGGAGAAGGAAGGG  600

seq1  TGGCTGTTGGAGGGCCTCACATTCCAGTCTTTATCCCTGAGTGACAGCGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTTGGAGGGCCTCACATTCCAGTCTTTATCCCTGAGTGACAGCGA  650

seq1  TGACCTTCTGGTCTGAAGTTTTATGGCACAAAATGAAAACTGTTTATCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTCTGGTCTGAAGTTTTATGGCACAAAATGAAAACTGTTTATCTT  700

seq1  GCCCAGGCTTCCACATCTGACACAGGCAACTCATTCGACTTCACATCCCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGCTTCCACATCTGACACAGGCAACTCATTCGACTTCACATCCCG  750

seq1  GATAAAGTGTAAACAGGAGTGGGATGATATACGTCCCCAGGGACAAGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAGTGTAAACAGGAGTGGGATGATATACGTCCCCAGGGACAAGTTT  800

seq1  GAGAAATAGCTATCACCCTTGTAAACATCCTCCCCCTTTTAATATATGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATAGCTATCACCCTTGTAAACATCCTCCCCCTTTTAATATATGCT  850

seq1  CCTCCTGATTGTTCTAATGCTGTAGTGCCAGCATTGTCTCTAAAACTGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGATTGTTCTAATGCTGTAGTGCCAGCATTGTCTCTAAAACTGAG  900

seq1  ATTCTATGGCATGACAAATATTTTTTATTTGATAAATATTTCAGTAAATA  950
      ||||||||||||||| ||||||||||||||||||||||||||||| ||||
seq2  ATTCTATGGCATGAC-AATATTTTTTATTTGATAAATATTTCAGT-AATA  948

seq1  AATGTCAGAAAGAAATTTACATTAAACTCCAAGTTGCTTGGTGTTGCTTC  1000
      ||||||||||||||| ||||| |||||||||||||||| |  ||||||||
seq2  AATGTCAGAAAGAAA-TTACA-TAAACTCCAAGTTGCTGGTGGTTGCTTC  996

seq1  AGTGATTTTGGAAATGACTGTACCTATCTACTTTGTACTGGTTATGCTCA  1050
      ||||||||||||||||||||| |||||| |||| ||   || |||| || 
seq2  AGTGATTTTGGAAATGACTGT-CCTATCCACTTGGTCTCGGGTATG-TCC  1044

seq1  ATTCAATAAAACATATTTAGAAAACAAGAAAACATTTTCCCATGTACCTT  1100
      ||| ||| ||||| || |||||||||||||||  ||||  |||| | |||
seq2  ATTTAAT-AAACAAATATAGAAAACAAGAAAAACTTTTTTCATG-ATCTT  1092

seq1  AGAAAAGGTAGGCTGAAGCCGGGTGGTGGTGGCGCATGCCTTTAATC  1147
      | |||| |||||||||||||||| ||||| |||||||| | ||||||
seq2  A-AAAAAGTAGGCTGAAGCCGGG-GGTGGGGGCGCATGACCTTAATC  1137