BAC Information

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BAC

Clone NameB6Ng01-060J23
Chromosome17 (Build37)17 (Build37)
Map Location 13,966,890 - 13,968,03014,162,743 - 14,163,676
singlet/doubletsingletsinglet
Overlap geneMllt4
Upstream geneEG635617, Mas1, Mrgprh, Pnldc1, Mrpl18, Tcp1, Acat3, Acat2, Wtap, Sod2, Gpr31c, Tcp10c, Ttll2, Unc93a, Smok2a, Smok2b, LOC667359, LOC100041352, LOC667372, LOC667384, Smok4a, Tcte2
Downstream geneLOC100041464, EG635895, EG664821, EG664831, 4930488N24Rik, Dact2, Smoc2, LOC664856, Thbs2, LOC100041236, Wdr27
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060J23.bB6Ng01-060J23.g
ACCDH881547DH881548
length1,135976
definitionDH881547|Mus musculus domesticus DNA, BAC clone: B6Ng01-060J23, 5' end.DH881548|Mus musculus domesticus DNA, BAC clone: B6Ng01-060J23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(13,966,890 - 13,968,030)(14,162,743 - 14,163,676)
sequence
gaattcagccccatcactgtgatctcaccaacatggatggagtggtcact
gtgacacccagaagtatggatgcagagacctacgtggatggtcagcgcat
ctcagagaccacaatgctgcagagtggcatgagactgcagtttggcacct
cgcatgtgtttaagtttgtggaccccatccaggaccacgttctttccaag
agatctgtggatggaggcctgatggtcaagggcccaagacataaacctgg
gtgaatgtgatagatcagcttaaggattttagagtgtttggctgtaaagt
aatttcaattagatggaaatatctttacttagagtttattacattagttt
aaattttctgtatgtgtgtctgcgtctgttccttttggagttgagaggat
acctcacaggagtaggttctcctacttgtgggtcctgtggatcaaactca
ggctgtcagcctgccattttccccatccttaaattttcagttttaaaaga
tcaaggtgaagaagggtctggagataaggcttagtgcttaaaaacagttg
ctgatcttacagatgatcccagtttggttcccagcacctaaatcaggcag
ctcataactgtctgtagtgccagccctaggggtcctgatgtgggcattat
acacacacatgttgcacatatatacatgcaggctaatcactcacctattt
aaaataattttttttgaagatcagtgcattttatgaaatgggagtttata
tcacaaatttggattggttttggagcaaacacgtagattctgattttatc
ttgaaattggtttttaagttgatctctttttgtgtgaaccatcaccctat
gtaactaatagtatttcaaatcttttctttgatgtattttcctccttcat
attcttctccctgagaaccatggtaatgcaagggggaatctgtttaggaa
ttcagagcattttagcttcacttagtgttttctgaggtcttgcagtgtgg
tctactaatgagcattcttctggagaagagtgactttttctttaggtgat
aattttgaaacatacactgctagcctattttgctatctattaatggttag
taggtatctttggaaaataggtgccatggctcttc
gaattcaatcctggctgtccttgaatgtttgcttcagtcaagagagattg
tcatgcttgcaatttcatcccttttcacatttacttccttcttgtgcttt
aaaactcttgtcaatcgttaacaaaactgtgttgttgcctttttaaatgt
aaaaaagatactgtcaactgaagtttgcctgaatgaaaatgtacagtgtg
tgtcagaatatatctgctaacactattaatgcttgcctcccattttctgt
tcctcagagagtttactaagatttgaaacatatattaactgtggaaagca
tacttgttagaggttgtgaaaattagtgatatttctcattgttttatggt
ttgttcttaaaacacagcagaaaaaggtaagtcaataccctatccaaaca
gaagacgagagaaaaagttctaggaagaggggaggactaagaaatcagga
aacaacacccttcacaatagtcacaaataatataaaacacctgagtgtga
ctctaactaagcaagtgatctgtacaataagaactaaaagtctttgaaga
aggaaatcgaaaaaggtctcagtggatggaaagatcttccatgctcatgg
attgttgggattaatatagtaaaaatggctatcttgctgaaagcaatcta
cagattcaattcaatccccatcaaaattccaactcaattcttcacagagt
tagaaagggcaatttgcaaattcatctggaataacataaaacctaggaca
gcaaaaactattctcaacaataaaagaaccactggtggaatcaccatgcc
tgacctcaagctgtattacagtgcaatagtgatgacaactgtatgggtac
tggtacagtgacagaaggtagatcaatggaatagaattgaagattcagaa
atgaacccacaacctatggtcacttgatctttgacaaggagctaaaatct
atccagtgggaaaaaagacagtattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_13966890_13968030
seq2: B6Ng01-060J23.b_47_1181

seq1  GAATTCAGCCCCATCACTGTGATCTCACCAACATGGATGGAGTGGTCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCCCATCACTGTGATCTCACCAACATGGATGGAGTGGTCACT  50

seq1  GTGACACCCAGAAGTATGGATGCAGAGACCTACGTGGATGGTCAGCGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACACCCAGAAGTATGGATGCAGAGACCTACGTGGATGGTCAGCGCAT  100

seq1  CTCAGAGACCACAATGCTGCAGAGTGGCATGAGACTGCAGTTTGGCACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGACCACAATGCTGCAGAGTGGCATGAGACTGCAGTTTGGCACCT  150

seq1  CGCATGTGTTTAAGTTTGTGGACCCCATCCAGGACCACGTTCTTTCCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATGTGTTTAAGTTTGTGGACCCCATCCAGGACCACGTTCTTTCCAAG  200

seq1  AGATCTGTGGATGGAGGCCTGATGGTCAAGGGCCCAAGACATAAACCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGTGGATGGAGGCCTGATGGTCAAGGGCCCAAGACATAAACCTGG  250

seq1  GTGAATGTGATAGATCAGCTTAAGGATTTTAGAGTGTTTGGCTGTAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGTGATAGATCAGCTTAAGGATTTTAGAGTGTTTGGCTGTAAAGT  300

seq1  AATTTCAATTAGATGGAAATATCTTTACTTAGAGTTTATTACATTAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAATTAGATGGAAATATCTTTACTTAGAGTTTATTACATTAGTTT  350

seq1  AAATTTTCTGTATGTGTGTCTGCGTCTGTTCCTTTTGGAGTTGAGAGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTCTGTATGTGTGTCTGCGTCTGTTCCTTTTGGAGTTGAGAGGAT  400

seq1  ACCTCACAGGAGTAGGTTCTCCTACTTGTGGGTCCTGTGGATCAAACTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACAGGAGTAGGTTCTCCTACTTGTGGGTCCTGTGGATCAAACTCA  450

seq1  GGCTGTCAGCCTGCCATTTTCCCCATCCTTAAATTTTCAGTTTTAAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTCAGCCTGCCATTTTCCCCATCCTTAAATTTTCAGTTTTAAAAGA  500

seq1  TCAAGGTGAAGAAGGGTCTGGAGATAAGGCTTAGTGCTTAAAAACAGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGTGAAGAAGGGTCTGGAGATAAGGCTTAGTGCTTAAAAACAGTTG  550

seq1  CTGATCTTACAGATGATCCCAGTTTGGTTCCCAGCACCTAAATCAGGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCTTACAGATGATCCCAGTTTGGTTCCCAGCACCTAAATCAGGCAG  600

seq1  CTCATAACTGTCTGTAGTGCCAGCCCTAGGGGTCCTGATGTGGGCATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAACTGTCTGTAGTGCCAGCCCTAGGGGTCCTGATGTGGGCATTAT  650

seq1  ACACACACATGTTGCACATATATACATGCAGGCTAATCACTCACCTATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACATGTTGCACATATATACATGCAGGCTAATCACTCACCTATTT  700

seq1  AAAATAATTTTTTTTGAAGATCAGTGCATTTTATGAAATGGGAGTTTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATTTTTTTTGAAGATCAGTGCATTTTATGAAATGGGAGTTTATA  750

seq1  TCACAAATTTGGATTGGTTTTGGAGCAAACACGTAGATTCTGATTTTATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAATTTGGATTGGTTTTGGAGCAAACACGTAGATTCTGATTTTATC  800

seq1  TTGAAATTGGTTTTTAAGTTGATCTCTTTTTGTGTGAACCATCACCCTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATTGGTTTTTAAGTTGATCTCTTTTTGTGTGAACCATCACCCTAT  850

seq1  GTAACTAATAGTATTTCAAAATCTTTCCTTGATGTATTTTCCTCCTTCAT  900
      ||||||||||||||||||||   |||| ||||||||||||||||||||||
seq2  GTAACTAATAGTATTTCAAATCTTTTCTTTGATGTATTTTCCTCCTTCAT  900

seq1  ATTCTTCTCCCTGAGAACCATGGTAATGCAAGGGGGAATCTGTTTAGGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTCCCTGAGAACCATGGTAATGCAAGGGGGAATCTGTTTAGGAA  950

seq1  TTCAGAGCATTTTAGCTCCACCTAGTGTTTTCCTGAGGTCTTGCAGTGTG  1000
      ||||||||||||||||| ||| ||||||||| ||||||||||||||||||
seq2  TTCAGAGCATTTTAGCTTCACTTAGTGTTTT-CTGAGGTCTTGCAGTGTG  999

seq1  GTCTACTAATGAGCATTCTTCTGGAGAAGAGTGACTTTTCCTTTA-GTGA  1049
      ||||||||||||||||||||||||||||||||||||||| ||||| ||||
seq2  GTCTACTAATGAGCATTCTTCTGGAGAAGAGTGACTTTTTCTTTAGGTGA  1049

seq1  TAATTTTGAAAACATACACTGTTTAGCTATTTTGCTATCTATTTTATATG  1099
      |||||||| |||||||||||| |   |||||||||||||||||    |||
seq2  TAATTTTG-AAACATACACTGCTAGCCTATTTTGCTATCTATT---AATG  1095

seq1  TTAATAAAGTATCTTTTGGAAAAATAGGTGCCATGGCTCTTC  1141
       | |  | ||||||||  | ||||||||||||||||||||||
seq2  GTTAGTAGGTATCTTT--GGAAAATAGGTGCCATGGCTCTTC  1135

seq1: chr17_14162743_14163676
seq2: B6Ng01-060J23.g_67_999

seq1  GAATTCAATCCTGGCTGTCCTTGAATGTTTGCTTCAGTCAAGAGAGATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCCTGGCTGTCCTTGAATGTTTGCTTCAGTCAAGAGAGATTG  50

seq1  TCATGCTTGCAATTTCATCCCTTTTCACATTTACTTCCTTCTTGTGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTTGCAATTTCATCCCTTTTCACATTTACTTCCTTCTTGTGCTTT  100

seq1  AAAACTCTTGTCAATCGTTAACAAAACTGTGTTGTTGCCTTTTTAAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTTGTCAATCGTTAACAAAACTGTGTTGTTGCCTTTTTAAATGT  150

seq1  AAAAAAGATACTGTCAACTGTAGTTTGCCTGAATGAAAATGTACAGTGTG  200
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAAAAAGATACTGTCAACTGAAGTTTGCCTGAATGAAAATGTACAGTGTG  200

seq1  TGTCAGAATATATCTGCTAACACTATTAATGCTTGCCTCCCATTTTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAATATATCTGCTAACACTATTAATGCTTGCCTCCCATTTTCTGT  250

seq1  TCCTCAGAGAGTTTATTAAGATTTGAAACATATATTAACTGTGGAAAGCA  300
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCCTCAGAGAGTTTACTAAGATTTGAAACATATATTAACTGTGGAAAGCA  300

seq1  TACTTGTTAGAGGTTGTGAAAATTAGTGATATTTCTCATTGTTTTATGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTTAGAGGTTGTGAAAATTAGTGATATTTCTCATTGTTTTATGGT  350

seq1  TTGTTCTTAAAACACAGCAGAAAAGGGTAAGTCAATACCTTATCCAAACA  400
      |||||||||||||||||||||||| |||||||||||||| ||||||||||
seq2  TTGTTCTTAAAACACAGCAGAAAAAGGTAAGTCAATACCCTATCCAAACA  400

seq1  GAAGACGAGAGAAAAAGTTCTAGGAAGAGGGGAGGACTAAGAAATCAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACGAGAGAAAAAGTTCTAGGAAGAGGGGAGGACTAAGAAATCAGGA  450

seq1  AACAACACCCTTCACAATAGTCACAAATAATATAAAACACCTGAGTGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACACCCTTCACAATAGTCACAAATAATATAAAACACCTGAGTGTGA  500

seq1  CTCTAACTAAGCAAGTGATCTGTACAATAAGAACTAAAAGTCTTTGAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAACTAAGCAAGTGATCTGTACAATAAGAACTAAAAGTCTTTGAAGA  550

seq1  AGGAAATCGAAAAAGGTCTCAGTGGATGGAAAGATCTTCCATGCTCATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATCGAAAAAGGTCTCAGTGGATGGAAAGATCTTCCATGCTCATGG  600

seq1  ATTGTTGGGATTAATATAGTAAAAATGGCTATCTTGCTGAAAGCAATCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTGGGATTAATATAGTAAAAATGGCTATCTTGCTGAAAGCAATCTA  650

seq1  CAGATTCAATTCAATCCCCATCAAAATTCCAACTCAATTCTTCACAGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTCAATTCAATCCCCATCAAAATTCCAACTCAATTCTTCACAGAGT  700

seq1  TAGAAAGGGCAATTTGCAAATTCATCTGGAATAACATAAAACCTAGGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGGGCAATTTGCAAATTCATCTGGAATAACATAAAACCTAGGACA  750

seq1  GCAAAAACTATTCTCAACAATAAAAGTACCACTGGTGGAATCACCATGCC  800
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GCAAAAACTATTCTCAACAATAAAAGAACCACTGGTGGAATCACCATGCC  800

seq1  TGACCTCAAGCTGTATTACAGTGCAATTGTGATGACAACTGCAT-GGTAC  849
      ||||||||||||||||||||||||||| ||||||||||||| || |||||
seq2  TGACCTCAAGCTGTATTACAGTGCAATAGTGATGACAACTGTATGGGTAC  850

seq1  TGGTACAGTGACAGAAACGTAGATCAATGGAATAGAATTGAAGATTCAGA  899
      |||||||||||||| || ||||||||||||||||||||||||||||||||
seq2  TGGTACAGTGACAG-AAGGTAGATCAATGGAATAGAATTGAAGATTCAGA  899

seq1  AATGAACCCACACACCTATGGTCAGTTGATCTTTG  934
      |||||||||||| ||||||||||| ||||||||||
seq2  AATGAACCCACA-ACCTATGGTCACTTGATCTTTG  933