BAC Information

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BAC

Clone NameB6Ng01-060K21
Chromosome17 (Build37)
Map Location 63,824,151 - 63,824,960
singlet/doubletsinglet
Overlap geneFbxl17
Upstream geneEfna5
Downstream genePpia-ps17_1026.1, LOC638867, LOC668677, A930002H24Rik, Fert2, LOC669778, Pja2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060K21.bB6Ng01-060K21.g
ACCDH881585DH881586
length1,264811
definitionDH881585|Mus musculus domesticus DNA, BAC clone: B6Ng01-060K21, 5' end.DH881586|Mus musculus domesticus DNA, BAC clone: B6Ng01-060K21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccagaccttcagagaaatttaatgctaatacccctcaaatta
gtccctaaaatagaaactggagaaaaagattttttaattctatgacatca
ttgttcttctgatacctaacgcacacaaaggcccaacaacaaaaagaaaa
ctacagagcaatatcctttatgaacataggtgcaaaattctcagtgaaat
acttagaaaataaattcaagactatattaaaaagatcatccatcatgatc
tagtaggttttatctcagagaagcaggatggttcagaatatatgactcaa
taaaggtaacccaccatctaaacagggtgaaaggaaaaaaacccacatga
ttatttcattacatgcagaaaaggcttttgacaaaactccaacaccactt
catgataaaagtcctggagagactaggtgtatacgggacatatcgtaaca
taataaagcaatatacaacaatcctacagtcaacatcaacctaaccagag
ggaaacccaaagcatttccacttaaaaaaaaaaaaaaaagcaagacaaga
ttatccactcttttcgtatctattcaatataatacttggaatcttagctt
ggttggtatatatattagaatcttcctaaaataaaatatttacatatatg
atagaaatctaaatggagccatcaaatcacagaggaaacagtgcctcaac
tagacatcttttgtcaccaagtaaaacattgtgtcaggaataggcgacat
tgaggtgagtcattggccaatgggatcccatgggaacccccaaatagctc
aagcaattttcaagatggctcttcacaaactaatgttaagcctccatttc
taaagaaagtatttgcgtatctcattgaacacggagaggctgagctactg
tctatggagaaccttcaaccctacaaattactggaagatactctgcattc
tacagaggagaaggaagccatcactgcagctgtaaacactgtgatctata
aagggatctgcattgaatatgttggtataatagtggcagaatgttgtggg
ataaccaatcaccttctgattaagaacctaaaaatgggaccaatgcctga
cactgctccatgctctaacctaaactggataggccaggactaggaacaaa
tagaccgactcctaatgactctctaatcaatagaaagtgctaagctcaat
tcctcgatgctgcttgaacttactaggactgaactgacacgtgcaacggt
cagagtatgagagt
gaattcaaaccaatactgagaactctgaattggcttaaatatgtcttgaa
gataaaatgagacttttcagtctgctaagtgctacttgaaccctcagatg
acctctccattgctttctacacagaccttgcccctggttcacagtggcaa
aacactggcattctctggctagagtaactctccatggcttggtatttggg
aggagaacacggggtttggattctgtctctaagaacagaagcctggtgac
gagtctgaggttaaagttcatttcacgtgtatcactcaatgaacttttaa
aaagctattaaatcttccgaactgaaagggttcatccttatgtctagcgc
aaatgatcaaaaagatcatcatactatttgacaatcctagctatgagagt
ctccaggcttccagtaaaaattaggttcatatgaaggaatgggctaagaa
tgcctcaaacttcttaacaatgttcatagaaagctacagagttataccat
caaatcctaaatgattgtgtttctagaatagaaatctgcactcttgaggc
tgtgccagtgcctggcaaatacagaagtggatgctcacagtcatctattg
gatggaacacaaggcccctaatgaaggagctagagaaagtacccaaggag
ctgaaggggtctgcaacccttttaggaggaacaacaatatgaactaatca
gtacccctcagagctgtgtctctagttgcatatgtagcagaggatggcct
agtcggccatcaatgggaggagaagcccttggtcttgcgaagatcatatg
ctcccagtaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_63824151_63824960
seq2: B6Ng01-060K21.g_69_879

seq1  GAATTCAAACCAATACTGAGAACTCTGAATTGGCTTAAATATGTCTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACCAATACTGAGAACTCTGAATTGGCTTAAATATGTCTTGAA  50

seq1  GATAAAATGAGACTTTTCAGTCTGCTAAGTGCTACTTGAACCCTCAGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAATGAGACTTTTCAGTCTGCTAAGTGCTACTTGAACCCTCAGATG  100

seq1  ACCTCTCCATTGCTTTCTACACAGACCTTGCCCCTGGTTCACAGTGGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTCCATTGCTTTCTACACAGACCTTGCCCCTGGTTCACAGTGGCAA  150

seq1  AACACTGGCATTCTCTGGCTAGAGTAACTCTCCATGGCTTGGTATTTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGGCATTCTCTGGCTAGAGTAACTCTCCATGGCTTGGTATTTGGG  200

seq1  AGGAGAACACGGGGTTTGGATTCTGTCTCTAAGAACAGAAGCCTGGTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAACACGGGGTTTGGATTCTGTCTCTAAGAACAGAAGCCTGGTGAC  250

seq1  GAGTCTGAGGTTAAAGTTCATTTCACGTGTATCACTCAATGAACTTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGAGGTTAAAGTTCATTTCACGTGTATCACTCAATGAACTTTTAA  300

seq1  AAAGCTATTAAATCTTCCGAACTGAAAGGGTTCATCCTTATGTCTAGCGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTATTAAATCTTCCGAACTGAAAGGGTTCATCCTTATGTCTAGCGC  350

seq1  AAATGATCAAAAAGATCATCATACTATTTGACAATCCTAGCTATGAGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATCAAAAAGATCATCATACTATTTGACAATCCTAGCTATGAGAGT  400

seq1  CTCCAGGCTTCCAGTAAAAATTAGGTTCATATGAAGGAATGGGCTAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGCTTCCAGTAAAAATTAGGTTCATATGAAGGAATGGGCTAAGAA  450

seq1  TGCCTCAAACTTCTTAACAATGTTCATAGAAAGCTACAGAGTTATACCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCAAACTTCTTAACAATGTTCATAGAAAGCTACAGAGTTATACCAT  500

seq1  CAAATCCTAAATGATTGTGTTTCTAGAATAGAAATCTGCACTCTTGAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCTAAATGATTGTGTTTCTAGAATAGAAATCTGCACTCTTGAGGC  550

seq1  TGTGCCAGTGCCTGGCAAATACAGAAGTGGATGCTCACAGTCATCTATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCAGTGCCTGGCAAATACAGAAGTGGATGCTCACAGTCATCTATTG  600

seq1  GATGGAACACAAGGCCCCTAATGAAGGAGCTAGAGAAAGTACCCAAGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAACACAAGGCCCCTAATGAAGGAGCTAGAGAAAGTACCCAAGGAG  650

seq1  CTGAAGGGGTCTGCAACCCTTTTAGGAGGAACAACAATATGAACTAATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGGGTCTGCAACCCTTTTAGGAGGAACAACAATATGAACTAATCA  700

seq1  GTACCCCTCAGAGCTGTGTCTCTAGTTGCATATGTAGCAGAGGATGGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCCTCAGAGCTGTGTCTCTAGTTGCATATGTAGCAGAGGATGGCCT  750

seq1  AGTCGGCCATCAATGGGAGGAGAAGCCCTTGGTCTTGCGAAGATCATATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGGCCATCAATGGGAGGAGAAGCCCTTGGTCTTGCGAAGATCATATG  800

seq1  C-CCCAGTACA  810
      | |||||||||
seq2  CTCCCAGTACA  811