BAC Information

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BAC

Clone NameB6Ng01-063L07
Chromosome17 (Build37)
Map Location 44,281,206 - 44,376,369
singlet/doubletdoublet
Overlap geneClic5
Upstream geneLOC100043770, Gpr110, Gpr116, Mep1a, LOC100043332, Pla2g7, Tdrd6, Slc25a27, Cyp39a1, Dscr1l1, Enpp5, Enpp4
Downstream geneRunx2, Supt3h, 4930564C03Rik, EG210562
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063L07.bB6Ng01-063L07.g
ACCDH883715DH883716
length1,1341,110
definitionDH883715|Mus musculus domesticus DNA, BAC clone: B6Ng01-063L07, 5' end.DH883716|Mus musculus domesticus DNA, BAC clone: B6Ng01-063L07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,281,206 - 44,282,353)(44,375,242 - 44,376,369)
sequence
gaattctcttcaaaaagaggaaagggaagtattactcaaatggggatgat
attagttctcaaaatgaaggtggtaggggacagtgtgtctaagtgttgac
tgaacttgtcctaaagaatttcgaacaaacatctgctcatcttagataga
gcaagacaatagtacaccttggtaagccaataagtctttttgtctctagg
agtataggtgaggggttacaggatcatgggtgatcccatgatctacatcc
ataaaaagtcctacctgctcccgaatgatgacttttttcatagctgcata
gatggagtccccattacacttcagcttcacagtctatatactttccaaag
accacatgcagctgggatagaatttcatacagctaggaggagaggatcag
gaaggactgcgtggtatgatgtcagactaaggtataatgatgcttctcag
accccttctgcgaggaacattgacacactcattttctccatctggtcaac
ccttccttttctttctggacatatgttccctaggaagatatctccaaccc
tcaggggaattctgagggtccttccttcagcacttacctttgtcaaaatg
ttcatcagtacagattggcatctcagttgattctcctcagtttcccactg
agcagaaacctccacagtgaaagcactttccagtcacatcttgctcctgt
attacatcttgctcacagttagaagaatctggcccacagttggagctgat
aaatactagttgaacagaattggcttatgttggttaggggaactttagtt
gggcttgctttggggtggtggagggttcatttctttctgtgctctgggac
actgggtgagcactcaagcaaatccctgtgtctctgaagactggtgagaa
accaactggcacagaggggaaaaaaaaaccaatctcccatcacatcctcc
attgtgagtaatacttggaataaacttgtctagttattttggctgtgttt
atagagcagtgtcctgtgagactctgctcatgctcgtatacctcatcaca
ctactactaggaacacaaaaactgcatcaagtgtggaagacctgggttgt
tctcccactctgtcagcttttccaaattcatact
gaattccagtgacagctcccaagtcactcccaacaggctgcttgctctcc
agcctccttctgtgacactcaaacaactgagactaatttacttagttcct
tgttgactcagtgtgcgtccctcccctcacataaagagaggacattcttt
gcaggctgctcctgttttgtaactgacactggccaggaaggaagtcctct
ctggtcttattttggagcagttactgtggcttaaagacacagcggtctgt
tagtctgttgacggggcagcagtgtggttttgtttgtgacggggcagcag
tgtggtttcgtttctgggatcctgggggtactttggctgctaggttctga
cacctttgggacatgccacttctggctcctgaagctgggcattgtcaaaa
gcatgctggccagcgccaccccttcctctctcagtcagctcccacccccg
cagttggaattgaaattacagaattccatgtctccagattggatttgtga
attatttcacgggcctcatcctttctttagctccctgattcacagctcca
tgaggggcgccgggtttcaagttcgtgcagcaagccaagtagaatcctaa
acataaacccatggcccacctctttaaacccctaacagcactctctcgga
ttaaaaactgggataagatcagttttcataggaattagtatttgtgtgcg
tgcggatagtgctgtaaacaaaggtgaccaccaaggcagccttagaggga
tgtcggcaggactgggtctgataatgtgtgtgagagaagcagaagcatcc
ttaagatgcccgagagactccgtcccctgcctgagctccagcttgaaact
ctagtgagagtctctcctacggatgagaatctaaagactctggtctctcg
gaaaggaagctcttgcccaggctctgggatcctgctcgtttagttgttac
agacacaggctgcatgggagtacatgctcccttacttgtgcagacactag
gttcttagcagcagccctctatttcagctggtagagactcagtgggtctg
ctcgctcctttctaatatagatgctgattcctatgaggtactatcacggg
aatttgcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_44281206_44282353
seq2: B6Ng01-063L07.b_44_1177

seq1  GAATTCTCTTCAAAAAGAGGAAAGGGAAGTATTACTCAAATGGGGATGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCAAAAAGAGGAAAGGGAAGTATTACTCAAATGGGGATGAT  50

seq1  ATTAGTTCTCAAAATGAAGGTGGTAGGGGACAGTGTGTCTAAGTGTTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTTCTCAAAATGAAGGTGGTAGGGGACAGTGTGTCTAAGTGTTGAC  100

seq1  TGAACTTGTCCTAAAGAATTTCGAACAAACATCTGCTCATCTTAGATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTGTCCTAAAGAATTTCGAACAAACATCTGCTCATCTTAGATAGA  150

seq1  GCAAGACAATAGTACACCTTGGTAAGCCAATAAGTCTTTTTGTCTCTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGACAATAGTACACCTTGGTAAGCCAATAAGTCTTTTTGTCTCTAGG  200

seq1  AGTATAGGTGAGGGGTTACAGGATCATGGGTGATCCCATGATCTACATCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAGGTGAGGGGTTACAGGATCATGGGTGATCCCATGATCTACATCC  250

seq1  ATAAAAAGTCCTACCTGCTCCCGAATGATGACTTTTTTCATAGCTGCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAGTCCTACCTGCTCCCGAATGATGACTTTTTTCATAGCTGCATA  300

seq1  GATGGAGTCCCCATTACACTTCAGCTTCACAGTCTATATACTTTCCAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGTCCCCATTACACTTCAGCTTCACAGTCTATATACTTTCCAAAG  350

seq1  ACCACATGCAGCTGGGATAGAATTTCATACAGCTAGGAGGAGAGGATCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATGCAGCTGGGATAGAATTTCATACAGCTAGGAGGAGAGGATCAG  400

seq1  GAAGGACTGCGTGGTATGATGTCAGACTAAGGTATAATGATGCTTCTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACTGCGTGGTATGATGTCAGACTAAGGTATAATGATGCTTCTCAG  450

seq1  ACCCCTTCTGCGAGGAACATTGACACACTCATTTTCTCCATCTGGTCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTCTGCGAGGAACATTGACACACTCATTTTCTCCATCTGGTCAAC  500

seq1  CCTTCCTTTTCTTTCTGGACATATGTTCCCTAGGAAGATATCTCCAACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTTTCTTTCTGGACATATGTTCCCTAGGAAGATATCTCCAACCC  550

seq1  TCAGGGGAATTCTGAGGGTCCTTCCTTCAGCACTTACCTTTGTCAAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGAATTCTGAGGGTCCTTCCTTCAGCACTTACCTTTGTCAAAATG  600

seq1  TTCATCAGTACAGATTGGCATCTCAGTTGATTCTCCTCAGTTTCCCACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAGTACAGATTGGCATCTCAGTTGATTCTCCTCAGTTTCCCACTG  650

seq1  AGCAGAAACCTCCACAGTGAAAGCACTTTCCAGTCACATCTTGCTCCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAACCTCCACAGTGAAAGCACTTTCCAGTCACATCTTGCTCCTGT  700

seq1  ATTACATCTTGCTCACAGTTAGAAGAATCTGGCCCACAGTTGGAGCTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATCTTGCTCACAGTTAGAAGAATCTGGCCCACAGTTGGAGCTGAT  750

seq1  AAATACTAGTTGAACAGAATTGGCTTATGTTGGTTAGGGGAACTTTAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTAGTTGAACAGAATTGGCTTATGTTGGTTAGGGGAACTTTAGTT  800

seq1  GGGCTTGCTTTGGGGTGGTGGAGGGTTCATTTCTTTCTGTGCTCTGGGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTGCTTTGGGGTGGTGGAGGGTTCATTTCTTTCTGTGCTCTGGGAC  850

seq1  ACTGGGTGAGCACTCAAGCAAATCCCTGTGTCTCTGAAGACTGGTGAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTGAGCACTCAAGCAAATCCCTGTGTCTCTGAAGACTGGTGAGAA  900

seq1  ACCAACTGGCACAGAGGGGAAAAAAAAAACCAATCTCCCATCACATCCTC  950
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ACCAACTGGCACAGAGGGG-AAAAAAAAACCAATCTCCCATCACATCCTC  949

seq1  CATTGTGAGTTAAATACTTGGAATAAACTTGTCTAGTTATTTTGGCTGTG  1000
      ||||||||||  ||||||||||||||||||||||||||||||||||||||
seq2  CATTGTGAGT--AATACTTGGAATAAACTTGTCTAGTTATTTTGGCTGTG  997

seq1  TTTATAGAGCAGTGTCCTGTGAAGACTCTGCTCAATGCTCGTATA-CTCA  1049
      ||||||||||||||||||||| ||||||||||| ||||||||||| ||||
seq2  TTTATAGAGCAGTGTCCTGTG-AGACTCTGCTC-ATGCTCGTATACCTCA  1045

seq1  TCACACTACTACCTAGAAACACAAACACTTGCCAATCCAGTGT-GAAGAC  1098
      ||||||||||| |||| |||||||| || |||  ||| ||||| ||||||
seq2  TCACACTACTA-CTAGGAACACAAAAAC-TGC--ATCAAGTGTGGAAGAC  1091

seq1  CTGGGGTTGTTTCTCCCACTCTGTTCAGGTCTTTTCCCATATTTCATACT  1148
      || |||||| ||||||||||||| ||||  |||||||   | ||||||||
seq2  CT-GGGTTG-TTCTCCCACTCTG-TCAG--CTTTTCC--AAATTCATACT  1134

seq1: chr17_44375242_44376369
seq2: B6Ng01-063L07.g_69_1178 (reverse)

seq1  CCTGCAAAATCCCGTGATAGGTACTTCATAAGGGAAATTCCAGCATTCTA  50
      |||||||| |||||||||| |||| |||||  ||||    ||||| ||||
seq2  CCTGCAAATTCCCGTGATA-GTACCTCATA--GGAA---TCAGCA-TCTA  43

seq1  TATTAGACAAGGAAGCCGAGCAGACCCACTGAGGTCTCCTACCAGCTGGA  100
      ||||||| |||||   |||||||||||||||| |||| ||||||||| ||
seq2  TATTAGA-AAGGA--GCGAGCAGACCCACTGA-GTCT-CTACCAGCT-GA  87

seq1  AATAGAGGGGCTGCTGCTAAGATCCTAGTGTCTGGCAC-AGTAAGGGAGC  149
      |||||| ||||||||||||||| |||||||||| |||| |||||||||||
seq2  AATAGA-GGGCTGCTGCTAAGAACCTAGTGTCT-GCACAAGTAAGGGAGC  135

seq1  ATGTACCTCCCATGCAGCCTGTGTCTGTAACAACTAAAACGAGCAGGATC  199
      ||||| ||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATGTA-CTCCCATGCAGCCTGTGTCTGTAACAACT-AAACGAGCAGGATC  183

seq1  CCAGAGCCTGGGCAAGGAGCTTCCTTTCCGAGAGACCAGAGTCTTTAGAT  249
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCAGAGCCTGGGCAA-GAGCTTCCTTTCCGAGAGACCAGAGTCTTTAGAT  232

seq1  TCTCATCCGTAGGAGAGAACTCTCACTAGAGTTCCAAGCTGGAGCTCAGG  299
      ||||||||||||||||| ||||||||||||||| ||||||||||||||||
seq2  TCTCATCCGTAGGAGAG-ACTCTCACTAGAGTTTCAAGCTGGAGCTCAGG  281

seq1  CAGGGGACGGAGTCTCTCGGGCATCTTAAGGATGCTTCTGCTTCTCTCAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGACGGAGTCTCTCGGGCATCTTAAGGATGCTTCTGCTTCTCTCAC  331

seq1  ACACATTATCAGACCCAGTCCTGCCGACATCCCTCTAAGGCTGCCTTGGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTATCAGACCCAGTCCTGCCGACATCCCTCTAAGGCTGCCTTGGT  381

seq1  GGTCACCTTTGTTTACAGCACTATCCGCACGCACACAAATACTAATTCCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACCTTTGTTTACAGCACTATCCGCACGCACACAAATACTAATTCCT  431

seq1  ATGAAAACTGATCTTATCCCAGTTTTTAATCCGAGAGAGTGCTGTTAGGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAACTGATCTTATCCCAGTTTTTAATCCGAGAGAGTGCTGTTAGGG  481

seq1  GTTTAAAGAGGTGGGCCATGGGTTTATGTTTAGGATTCTACTTGGCTTGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAGAGGTGGGCCATGGGTTTATGTTTAGGATTCTACTTGGCTTGC  531

seq1  TGCACGAACTTGAAACCCGGCGCCCCTCATGGAGCTGTGAATCAGGGAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACGAACTTGAAACCCGGCGCCCCTCATGGAGCTGTGAATCAGGGAGC  581

seq1  TAAAGAAAGGATGAGGCCCGTGAAATAATTCACAAATCCAATCTGGAGAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAAGGATGAGGCCCGTGAAATAATTCACAAATCCAATCTGGAGAC  631

seq1  ATGGAATTCTGTAATTTCAATTCCAACTGCGGGGGTGGGAGCTGACTGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATTCTGTAATTTCAATTCCAACTGCGGGGGTGGGAGCTGACTGAG  681

seq1  AGAGGAAGGGGTGGCGCTGGCCAGCATGCTTTTGACAATGCCCAGCTTCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAAGGGGTGGCGCTGGCCAGCATGCTTTTGACAATGCCCAGCTTCA  731

seq1  GGAGCCAGAAGTGGCATGTCCCAAAGGTGTCAGAACCTAGCAGCCAAAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCAGAAGTGGCATGTCCCAAAGGTGTCAGAACCTAGCAGCCAAAGT  781

seq1  ACCCCCAGGATCCCAGAAACGAAACCACACTGCTGCCCCGTCACAAACAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCAGGATCCCAGAAACGAAACCACACTGCTGCCCCGTCACAAACAA  831

seq1  AACCACACTGCTGCCCCGTCAACAGACTAACAGACCGCTGTGTCTTTAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACACTGCTGCCCCGTCAACAGACTAACAGACCGCTGTGTCTTTAAG  881

seq1  CCACAGTAACTGCTCCAAAATAAGACCAGAGAGGACTTCCTTCCTGGCCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTAACTGCTCCAAAATAAGACCAGAGAGGACTTCCTTCCTGGCCA  931

seq1  GTGTCAGTTACAAAACAGGAGCAGCCTGCAAAGAATGTCCTCTCTTTATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAGTTACAAAACAGGAGCAGCCTGCAAAGAATGTCCTCTCTTTATG  981

seq1  TGAGGGGAGGGACGCACACTGAGTCAACAAGGAACTAAGTAAATTAGTCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGAGGGACGCACACTGAGTCAACAAGGAACTAAGTAAATTAGTCT  1031

seq1  CAGTTGTTTGAGTGTCACAGAAGGAGGCTGGAGAGCAAGCAGCCTGTTGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTTTGAGTGTCACAGAAGGAGGCTGGAGAGCAAGCAGCCTGTTGG  1081

seq1  GAGTGACTTGGGAGCTGTCACTGGAATTC  1128
      |||||||||||||||||||||||||||||
seq2  GAGTGACTTGGGAGCTGTCACTGGAATTC  1110