BAC Information

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BAC

Clone NameB6Ng01-064I08
Chromosome17 (Build37)
Map Location 76,627,561 - 76,744,383
singlet/doubletdoublet
Overlap geneLOC100043886
Upstream geneLtbp1, Rasgrp3, 2810405J04Rik, LOC668787, LOC100043885
Downstream geneEG624348
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064I08.bB6Ng01-064I08.g
ACCDH884285DH884286
length1,235914
definitionDH884285|Mus musculus domesticus DNA, BAC clone: B6Ng01-064I08, 5' end.DH884286|Mus musculus domesticus DNA, BAC clone: B6Ng01-064I08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,627,561 - 76,628,541)(76,743,470 - 76,744,383)
sequence
gaattcaactgctccttctagcagtgaatggcaagggtgggaggcctcca
aagatttcaatgttagagctcttcaatgtacagcttattagaaaacagct
cttttagacaacagtcaatgaaacagcttttgctctttatttggggtgag
caaggactatgtaaacctgagtgggatggaatttttcttagggtgacatt
tcactgactgaggtttaagtttctgggcatacttccttttcatggagagg
catttcaggaatttgaacctgtaattttgcaatgacattcttcaggtaga
gtgtggggatttggctccccatatagggtagagaagatgaagctctgcta
ggaaagggaatcgtctattttgcacccacctcagggaagctgtctggaca
tgggtgacttgaaccttaagtagcagggtttctcaactatacaggtctaa
ctgcatgtttgcttgtagaagaaagcaaatagagtctatttatcaccctt
cacaaaactcaagtacaagtagatcaaagattcaacataaaaccagatat
actaaatctcaaagaagagaaaatgagggatagccttaaacacatttaca
taggagacaacttcctgaacaaagcaccaacagctcaggcacatagatca
acaattaataaatgagacttcatgaaactgaaaatcctcagtaaggcaaa
tgataccttaaataggacaaaatgacagcctacagaatggggaaagattg
tcattagtcctacatccaaaagagatgatgtccacattcttgtggtgggc
ctcttacttccactttctataaaaagttttctgttatctactgtaggttc
ttagctgtcatgggtgctatagtttatgcaccaaccttttcatgaaagtt
ccaagagaaaatcaaagtggatctagttgactctgagacacacctgtgtt
tttcatagccagatggaaatggacatcagtatgtgagtgtcaagtagaga
gatgtccctagaagagcagacaagcacatgctcagaatcattgaactcct
ttatgtatctgcttcataaagggcctattcttttcttaattgtcaattcc
gctggatttattgatgagatgcctcatttatgctaatacctagagctccc
aagatctcacatctcaaggcatttcgtatgaaatttgtgccctgtgtcct
cctagagctggataaatatgttctatcacacgcct
gaattctacctattttaattgatatttcttataactattacaacttataa
tcaacacaatgtgtgaatagtgacaacatgtaaaataagggcatgaccaa
ttattgaaaattgcaatatttgattttttttcctcaactgttacgaatta
gtctggtatgttttgtttttctgttttttgttttgttttttggtttttgg
tttttttgtttgtttttttttttttttttatttatttttttttttgagac
agggttcctttgtatagccctggctgtcctggaactcactgtgtagacca
ggctggcctcgaactcagaaatctgctcgcctcttcctcccaagtgctgg
gattaagggcgtgtgccaccaccgcccggctgaattagtcagtttttaat
tcattcctgtaggagacgggcacacaccatggtgttgttcatgtgaaggt
cagaggaaaccttgacttttttcttttctcctgacatttttttttgggag
gagggggagactcaggtcagcagccttggtgaccagagcctttgccttct
acgccatctcaatgctccagaatatctgttttatgagaggtataaaaaat
gattaaaaagctgcagtgcccaagtatgaataaggaggattttttttctt
aaacatggcatttgatttcggccttaaatctggggggaaagttgagtgag
taaatatacattcaaaaggcaaatgatatgaaaagaagggtctgacgtga
ggagcagaggcagtcgcgtgctttggagagacacaaagagtcctctatat
aggacattagaatgagcatacgtactaggggcagatgagcagaaggggca
ctgagagaacacaggtcttgcttaaagcaaacagtcttttacacacacaa
gcacaggacagagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_76627561_76628541
seq2: B6Ng01-064I08.b_332_1280

seq1  ATTCTTCAGGTAGAGTGTGGGGATTTGGCTCCCCATATAGGGTAGAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCAGGTAGAGTGTGGGGATTTGGCTCCCCATATAGGGTAGAGAAG  50

seq1  ATGAAGCTCTGCTAGGAAAGGGAATCGTCTATTTTGCACCCACCTCAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCTCTGCTAGGAAAGGGAATCGTCTATTTTGCACCCACCTCAGGG  100

seq1  AAGCTGTCTGGACATGGGTGACTTGAACCTTAAGTAGCAGGGTTTCTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTCTGGACATGGGTGACTTGAACCTTAAGTAGCAGGGTTTCTCAA  150

seq1  CTATACAGGTCTAACTGCATGTTTGCTTGTAGAAGAAAGCAAATAGAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACAGGTCTAACTGCATGTTTGCTTGTAGAAGAAAGCAAATAGAGTC  200

seq1  TATTTATCACCCTTCACAAAACTCAAGTACAAGTAGATCAAAGATTCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATCACCCTTCACAAAACTCAAGTACAAGTAGATCAAAGATTCAAC  250

seq1  ATAAAACCAGATATACTAAATCTCAAAGAAGAGAAAATGAGGGATAGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACCAGATATACTAAATCTCAAAGAAGAGAAAATGAGGGATAGCCT  300

seq1  TAAACACATTTACATAGGAGACAACTTCCTGAACAAAGCACCAACAGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACATTTACATAGGAGACAACTTCCTGAACAAAGCACCAACAGCTC  350

seq1  AGGCACATAGATCAACAATTAATAAATGAGACTTCATGAAACTGAAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACATAGATCAACAATTAATAAATGAGACTTCATGAAACTGAAAATC  400

seq1  CTCAGTAAGGCAAATGATACCTTAAATAGGACAAAATGACAGCCTACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTAAGGCAAATGATACCTTAAATAGGACAAAATGACAGCCTACAGA  450

seq1  ATGGGGAAAGATTGTCATTAGTCCTACATCCAAAAGAGATGATGTCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGAAAGATTGTCATTAGTCCTACATCCAAAAGAGATGATGTCCACA  500

seq1  TTCTTGTGGTGGGCCTCTTACTTCCACTTTCTATAAAAAGTTTTCTGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGTGGTGGGCCTCTTACTTCCACTTTCTATAAAAAGTTTTCTGTTA  550

seq1  TCTACTGTAGGTTCTTAGCTGTCATGGGTGCTATAGTTTATGCACCAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGTAGGTTCTTAGCTGTCATGGGTGCTATAGTTTATGCACCAACC  600

seq1  TTTTCATGAAAGTTCCAAGAGAAAATCAAAGTGGATCTAGTTGACTCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATGAAAGTTCCAAGAGAAAATCAAAGTGGATCTAGTTGACTCTGA  650

seq1  AGAACACACCTGTGTTTTTCATAGCCAGATGGAAATGGACATCAGTAATG  700
         ||||||||||||||||||||||||||||||||||||||||||| |||
seq2  --GACACACCTGTGTTTTTCATAGCCAGATGGAAATGGACATCAGT-ATG  697

seq1  TGAGTGTCAAGGTAGAAGAGATGTCCCTAGAAGGAAGCAAGACAAGCACA  750
      |||||||||| |||| |||||||||||||||||  ||| |||||||||||
seq2  TGAGTGTCAA-GTAG-AGAGATGTCCCTAGAAG--AGC-AGACAAGCACA  742

seq1  TGCTCAG-ATCATTGACTTCCTTTA-GTATCTGCTTCATAAAGGGCCTAT  798
      ||||||| ||||||||  ||||||| ||||||||||||||||||||||||
seq2  TGCTCAGAATCATTGAACTCCTTTATGTATCTGCTTCATAAAGGGCCTAT  792

seq1  TCTTTTCTTAAATTGTCAAATTCAGCTTGAATTTATTGAATAGATTGCTC  848
      ||||||||| ||||||| ||||| || || |||||||||  ||||  |||
seq2  TCTTTTCTT-AATTGTC-AATTCCGC-TGGATTTATTGATGAGATGCCTC  839

seq1  ATTTTATGCTAATAAATCTAAGAGCTCCCAAGAAATCTACCAATTCTAAG  898
      | ||||||||||||   |  ||||||||||||  ||||  ||  ||| | 
seq2  A-TTTATGCTAATA---CCTAGAGCTCCCAAG--ATCT--CACATCTCAA  881

seq1  GGCATTTCAGTATAGGAAATAATTGTCCCTTGTTTCTCCTCTAATGACTG  948
      |||||||| ||||  |||||  |||| || ||  | |||||  |   |||
seq2  GGCATTTC-GTAT--GAAAT--TTGTGCCCTG--TGTCCTCCTAGAGCTG  924

seq1  TGATGAAAATTATGTTCTTAAGTTCACACGGCT  981
          || || ||||||||     ||||||| ||
seq2  ----GATAAATATGTTCT----ATCACACGCCT  949

seq1: chr17_76743470_76744383
seq2: B6Ng01-064I08.g_68_980 (reverse)

seq1  CTCTGTCCTGTGCTTGTGTTGTGTAAAATGACTGTTTGCTTTTAGCCAAG  50
      |||||||||||||||||| ||||||||| ||||||||||||| || ||||
seq2  CTCTGTCCTGTGCTTGTG-TGTGTAAAA-GACTGTTTGCTTTAAG-CAAG  47

seq1  CCCTGTGTTCTCTCAGTGCCCCTTCTGCTCATTCTGCCCCTAGTACGTAT  100
       |||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACCTGTGTTCTCTCAGTGCCCCTTCTGCTCA-TCTGCCCCTAGTACGTAT  96

seq1  GCTCATTCT-ATGTCCTATATAGAGGACTCTTTGTGTCTCTCCAAAGCAC  149
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTCTAATGTCCTATATAGAGGACTCTTTGTGTCTCTCCAAAGCAC  146

seq1  GCGACTGCCTCTGCTCCTCACGTCAGACCCTTCTTTTCATATCATTTGCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACTGCCTCTGCTCCTCACGTCAGACCCTTCTTTTCATATCATTTGCC  196

seq1  TTTTGAATGTATATTTACTCACTCAACTTT-CCCCCAGATTTAAGGCCGA  248
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTTGAATGTATATTTACTCACTCAACTTTCCCCCCAGATTTAAGGCCGA  246

seq1  AATCAAATGCCATGTTTAAGAAAAAAAATCCTCCTTATTCATACTTGGGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAATGCCATGTTTAAGAAAAAAAATCCTCCTTATTCATACTTGGGC  296

seq1  ACTGCAGC-TTTTAATCATTTTTTATACCTCTCATAAAACAGATATTCTG  347
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGCTTTTTAATCATTTTTTATACCTCTCATAAAACAGATATTCTG  346

seq1  GAGCATTGAGATGGCGTAGAAGGCAAAGGCTCTGGTCACCAAGGCTGCTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATTGAGATGGCGTAGAAGGCAAAGGCTCTGGTCACCAAGGCTGCTG  396

seq1  ACCTGAGTCTCCCCCTCCTCCCAAAAAAAAATGTCAGGAGAAAAGAAAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGTCTCCCCCTCCTCCCAAAAAAAAATGTCAGGAGAAAAGAAAAA  446

seq1  AGTCAAGGTTTCCTCTGACCTTCACATGAACAACACCATGGTGTGTGCCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGGTTTCCTCTGACCTTCACATGAACAACACCATGGTGTGTGCCC  496

seq1  GTCTCCTACAGGAATGAATTAAAAACTGACTAATTCAGCCGGGCGGTGGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTACAGGAATGAATTAAAAACTGACTAATTCAGCCGGGCGGTGGT  546

seq1  GGCACACGCCCTTAATCCCAGCACTTGGGAGGAAGAGGCGAGCAGATTTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACACGCCCTTAATCCCAGCACTTGGGAGGAAGAGGCGAGCAGATTTC  596

seq1  TGAGTTCGAGGCCAGCCTGGTCTACACAGTGAGTTCCAGGACAGCCAGGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCGAGGCCAGCCTGGTCTACACAGTGAGTTCCAGGACAGCCAGGG  646

seq1  CTATACAAAGGAACCCTGTCTCAAAAAAAAAAATAAATAAAAAAAAAAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACAAAGGAACCCTGTCTCAAAAAAAAAAATAAATAAAAAAAAAAAA  696

seq1  AAAAACAAACAAAAAAACCAAAAACCAAAAAACAAAACAAAAAACAGAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAACAAAAAAACCAAAAACCAAAAAACAAAACAAAAAACAGAAA  746

seq1  AACAAAACATACCAGACTAATTCGTAACAGTTGAGGAAAAAAAATCAAAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACATACCAGACTAATTCGTAACAGTTGAGGAAAAAAAATCAAAT  796

seq1  ATTGCAATTTTCAATAATTGGTCATGCCCTTATTTTACATGTTGTCACTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAATTTTCAATAATTGGTCATGCCCTTATTTTACATGTTGTCACTA  846

seq1  TTCACACATTGTGTTGATTATAAGTTGTAATAGTTATAAGAAATATCAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACACATTGTGTTGATTATAAGTTGTAATAGTTATAAGAAATATCAAT  896

seq1  TAAAATAGGTAGAATTC  914
      |||||||||||||||||
seq2  TAAAATAGGTAGAATTC  913