BAC Information

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BAC

Clone NameB6Ng01-065F10
Chromosome17 (Build37)
Map Location 36,892,765 - 36,893,889
singlet/doubletsinglet
Overlap genenone
Upstream geneIer3, Flot1, Tubb5, Mdc1, Nrm, 2310014H01Rik, Dhx16, 2310061I04Rik, 2610110G12Rik, Mrps18b, LOC100043673, Ppp1r10, LOC100043674, LOC667766, Abcf1, Prr3, Gna-rs1, H2-T24, H2-T23, H2-T22, EG547347, LOC667782, H2-Bl, EG667792, C920025E04Rik, H2-T10, LOC630294, LOC672718, ENSMUSG00000073403, LOC675325, LOC626268, EG667977, LOC625785, H2-T3, LOC100043127, EG667827, LOC435525, LOC677333, LOC100043134, LOC625881, Rpp21, Trim39, H2-M10.2, H2-M10.1, H2-M10.3, Gm318, LOC100043140, LOC674152, LOC383240, LOC224752, H2-M10.4, H2-M11, LOC667896, H2-M9, LOC620340, H2-M1, LOC667912, LOC100043158
Downstream geneLOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065F10.bB6Ng01-065F10.g
ACCDH884842DH884843
length1,1591,108
definitionDH884842|Mus musculus domesticus DNA, BAC clone: B6Ng01-065F10, 5' end.DH884843|Mus musculus domesticus DNA, BAC clone: B6Ng01-065F10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatactgaatggctgagaagcacctaaagaaatg
ttcaagatccttggccatccaggaaatgcaaatcaaacaaccctgagatt
tcacctcatacaagtcagaatggctaagattaaaaaataaaatcaggtga
cagcagatgctgggaaggatgtggagaaagaagaacactcctccattgct
ggtgggattacaagctggtacaaccactctgggaatcagtccagcggttc
cacagaaaattggatatagaactaccagaggttccaccaaaaccactcct
gggcatatacccagaagatgttcaaacatgtaataagaatacatgctctg
ctatgttcatagcagccttatttataatagccagaaagcagaaagaaccc
agatgtccctcaaaagataattggatacagaaaaatgtgatacatttaca
caatggagtactacgcagcttttgaaaacaatgaatttatgacatcctta
aacaaatggatgcatctggaggatatcatcctacgtgaggtaaaccaatt
aaaaaagaatacacgtgatataccctcaatgatgaaaacatgaaactcaa
ggagaaggaagaccaaagtgtgaatacttcaatccttctaagaaggggga
aaatacccatgggaggagatacagagacaaagtgagaagcagagactgaa
ggaataaccatccagaaactgccgcacctggggatccaacccatatacaa
ccaccaaacccagaccctattgtggatgccaagaagagcttgatgacaag
aacctgatatggctgtctcttaagaggttctgccagtgcctgacaaatac
agaagtgaactcaaagccatccattggatggagcatagggtccccaatga
aggagctagagaaagtacccaagtaactgaaggggtttgcagcctcatag
gagggacacatatgaagtaacagactccctgagctccctcggataaccac
caaccaagaaacacatggaggacccatggttctagctgcattataaagca
gagatgctagtcagcatcatgggagagaaggggtctggtgaaagtcctgc
cagtataaggatgcaggcagagcaagaatgggtggatgaaatcctggtgg
ggggttggt
gaattcttctaatgtaggagaacatggtggtgcgtgcctgtcatgctagt
cattgggaagcagaggatttcaagccttcctgacctagaggggattcatt
tcttaaagagcaaaaacaaggacaagaattcacattgcaattaaatactt
cctgtctacaaatctcatctgaaatgttactgcaatcttttctccacaca
cctaagtagacacacttcagattgtctcaggtgaactagctggcattgca
caccggcatgaggatcaggagtcaagaccatggagatccatggtagaggg
gaaaacacagggtcactctgatagactgtccagagaatgaactggggaaa
tttagacaacagcagtcagaggaggtgagccatggctagaaatctctagt
ttatttgcaaagaaataaaggaaatgatacagagcagaccagggaagagt
cctcctgtcctgtactttagcttaaccctcatggagatgaacttggtggg
taggcagcaatcactgacttcttttttcttcttcttccatgtttttagaa
cagtagagtgaaccttccttaatgaagcactgaggacaggtctaactctc
tgtagaagctttaaacaaagctggatggggccgggacactcaggaacaca
tggaaaaatctgccaggaataagtgagggtggcttggatgaaaactatca
gaagcagtgtgtgatggcaagaatcatgtaccttattagcaaagttgaaa
aggaaatattagaaagcagaagggaaaagtccagaactcataaaggggta
ctgtagttctagcaagcaccttcactgactagaaatgaccagagctatgg
taaagacagaaggcccctgaaaattccattgtgcactcagtaacagatat
tttaattcagagagagggagaaagatgacaaatgttgcaagcagtcacag
cagagcatatggaaaacactctcactcagtaccaactagagcagtttttt
ccaagacccctactgagctcattggttgttagcccagagcctcagtaaca
ctctctctcagacgttgagcattgatatgtgctgaaacctgccagcttgc
atataaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_36892765_36893889
seq2: B6Ng01-065F10.g_68_1175 (reverse)

seq1  CTTTATATGCAAACTTGCCAGGTTTCAGCACATATTCCAATGCTCTCACT  50
      |||||||||||| | || |||||||||||||||||  |||||  ||||  
seq2  CTTTATATGCAAGC-TGGCAGGTTTCAGCACATAT--CAATG--CTCAAC  45

seq1  GTCCTGAGAGAGTG-GTTACTGGAGGCTCTGGGGCTAACAAACCATGAGC  99
      || ||||||||| | |||||| |||||||| |||||||||| | ||||||
seq2  GT-CTGAGAGAGAGTGTTACT-GAGGCTCT-GGGCTAACAACCAATGAGC  92

seq1  TCAGTAGAGGTCTTGGAAAAAAACTGCTCTAGTTGGGTACTGAGTGGAGA  149
      ||||||| |||||||| ||||||||||||||||| |||||||||| ||||
seq2  TCAGTAGGGGTCTTGG-AAAAAACTGCTCTAGTT-GGTACTGAGT-GAGA  139

seq1  GTGTTTTCCACTATTGCTCCTGCTGTGACTGCTTGCAACATTTGTCAATC  199
      |||||||||| || |||| ||||||||||||||||||||||||||| |||
seq2  GTGTTTTCCA-TA-TGCT-CTGCTGTGACTGCTTGCAACATTTGTC-ATC  185

seq1  TTTCTCCCTCTCTCCTGAATTAAAATATCTGTTACTGAGTGCACAATGGA  249
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCCTCTCT-CTGAATTAAAATATCTGTTACTGAGTGCACAATGGA  234

seq1  ATTTTTCAGGGGCCTTCTGTCTTTACCATAGCTCTGGTCATTTCTAGTCA  299
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TTTTCAGGGGCCTTCTGTCTTTACCATAGCTCTGGTCATTTCTAGTCA  283

seq1  GTGAAGGTGCTTGCTAGAACTACAGTACCCCCTTTATGAGTTCTGGACTT  349
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GTGAAGGTGCTTGCTAGAACTACAGTA-CCCCTTTATGAGTTCTGGACTT  332

seq1  TTCCCTTCTGCTTTCTAATATTTCCTTTTCAACTTTGCTAATAAGGTACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTCTGCTTTCTAATATTTCCTTTTCAACTTTGCTAATAAGGTACA  382

seq1  TGATTCTTGCCATCACACACTGCTTCTGATAGTTTTCATCCAAGCCACCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTTGCCATCACACACTGCTTCTGATAGTTTTCATCCAAGCCACCC  432

seq1  TCACTTATTCCTGGCAGATTTTTCCATGTGTTCCTGAGTGTCCCGGCCCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTATTCCTGGCAGATTTTTCCATGTGTTCCTGAGTGTCCCGGCCCC  482

seq1  ATCCAGCTTTGTTTAAAGCTTCTACAGAGAGTTAGACCTGTCCTCAGTGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGCTTTGTTTAAAGCTTCTACAGAGAGTTAGACCTGTCCTCAGTGC  532

seq1  TTCATTAAGGAAGGTTCACTCTACTGTTCTAAAAACATGGAAGAAGAAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAAGGAAGGTTCACTCTACTGTTCTAAAAACATGGAAGAAGAAGA  582

seq1  AAAAAGAAGTCAGTGATTGCTGCCTACCCACCAAGTTCATCTCCATGAGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAGTCAGTGATTGCTGCCTACCCACCAAGTTCATCTCCATGAGG  632

seq1  GTTAAGCTAAAGTACAGGACAGGAGGACTCTTCCCTGGTCTGCTCTGTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGCTAAAGTACAGGACAGGAGGACTCTTCCCTGGTCTGCTCTGTAT  682

seq1  CATTTCCTTTATTTCTTTGCAAATAAACTAGAGATTTCTAGCCATGGCTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCTTTATTTCTTTGCAAATAAACTAGAGATTTCTAGCCATGGCTC  732

seq1  ACCTCCTCTGACTGCTGTTGTCTAAATTTCCCCAGTTCATTCTCTGGACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTCTGACTGCTGTTGTCTAAATTTCCCCAGTTCATTCTCTGGACA  782

seq1  GTCTATCAGAGTGACCCTGTGTTTTCCCCTCTACCATGGATCTCCATGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATCAGAGTGACCCTGTGTTTTCCCCTCTACCATGGATCTCCATGGT  832

seq1  CTTGACTCCTGATCCTCATGCCGGTGTGCAATGCCAGCTAGTTCACCTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACTCCTGATCCTCATGCCGGTGTGCAATGCCAGCTAGTTCACCTGA  882

seq1  GACAATCTGAAGTGTGTCTACTTAGGTGTGTGGAGAAAAGATTGCAGTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATCTGAAGTGTGTCTACTTAGGTGTGTGGAGAAAAGATTGCAGTAA  932

seq1  CATTTCAGATGAGATTTGTAGACAGGAAGTATTTAATTGCAATGTGAATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCAGATGAGATTTGTAGACAGGAAGTATTTAATTGCAATGTGAATT  982

seq1  CTTGTCCTTGTTTTTGCTCTTTAAGAAATGAATCCCCTCTAGGTCAGGAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCCTTGTTTTTGCTCTTTAAGAAATGAATCCCCTCTAGGTCAGGAA  1032

seq1  GGCTTGAAATCCTCTGCTTCCCAATGACTAGCATGACAGGCACGCACCAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGAAATCCTCTGCTTCCCAATGACTAGCATGACAGGCACGCACCAC  1082

seq1  CATGTTCTCCTACATTAGAAGAATTC  1125
      ||||||||||||||||||||||||||
seq2  CATGTTCTCCTACATTAGAAGAATTC  1108