BAC Information

Click to search

BAC

Clone NameB6Ng01-069D09
Chromosome17 (Build37)
Map Location 60,513,431 - 60,514,589
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043537, LOC100043542
Downstream geneLOC100043549, LOC433129
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069D09.bB6Ng01-069D09.g
ACCDH887586DH887587
length1,1441,186
definitionDH887586|Mus musculus domesticus DNA, BAC clone: B6Ng01-069D09, 5' end.DH887587|Mus musculus domesticus DNA, BAC clone: B6Ng01-069D09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctatcagaggactggggatttgccaagtttcatataaaactgca
atgacttttgaggccacacaggccattccatctattcaaaaatgaaatta
ggctccgtttttataggtttgaagccatggaaatttgacctctatctaga
acatctttatccatcaaaattatcaatactgtgagtaaggggtagaaagt
ttggcgtaagtcaccagaacgtataatttgtaaggtcctttatcaaggtt
tcacagataaattggttttgcaaatgcatttagaggaataattaactttg
agggtcaaaatggaagagaacatatatatatatatatatatatatatata
tatatatatatatatatataggcaatataagattttcattccttatcaca
gactttttcctccttttcatttctgttcgcttattatatataggggaggc
tatttcttaaatcaagtaaagagacatcatgatacactaattaaaattat
atcctgggaattttcaatataagtttgttagaaacaagtatttccctgta
gatattttgttctaaacttttgtaaacctcacttgttatgcagcagggac
ccaaggataaaatgatatctcaattataaatcctgagaggaaagcaggta
gaaaaatgaagatacatttcctagaaaatgaaaccttgaggaagtaaaga
cagaaacattaattggtataatgccaaggtaattatcacatgaacttgct
ggggaaagtaaagatatgctttgtacatgatgtcttgggtaaccatgatg
tgctagcaatgcataaggaaaacaatattagtttgtatttcatacgtctc
acaatagatgagtacatttaactgtttagagaacttggattttttttttt
cctcatctgacactgggaatcagagatgtcagaaacattttggaagtcat
ctttctttggctatggagtttcaaagcagtaacagtatgtgttacttttt
cctcaactccccccctcatgggtagagagcagaagaagctaatacagcgc
aaaaagtgagcagtgccggtgatttccttccctgagcaatcctttagaat
gttcctgcatgactcactcaatccgaggcagatcccatcacctc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccttcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagttttggagctgagatg
aaaggatggaccatgtagagactgccttatccagggatccaccccataat
tcagcatccaaacgctgacacctttgcatacactagcaagattttatcga
aaggacccagatgtagctgtctcttgtgagactatgccggggcctaagca
aacacagaagtggagcccacagtcaggtatggatgggttacaggcctctc
caatggaggagctagagaagtacccaagagctaagggatcctgcaaccct
atagggtggatcaacatttagaccaaccatatccccgaaactctgaactc
tatctgcatatgatcaaaagatggcctgtccgcatcactggaaaaagagg
cctattgaaacctcatcttttatgtctctaaatagggaatccacgtggtc
atataggggtgattgtgtggtgtagcgaggtgcgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_60513431_60514589
seq2: B6Ng01-069D09.b_46_1189

seq1  GAATTCCTATCAGAGGACTGGGGATTTGCCAAGTTTCATATAAAACTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATCAGAGGACTGGGGATTTGCCAAGTTTCATATAAAACTGCA  50

seq1  ATGACTTTTGAGGCCACACAGGCCATTCCATCTATTCAAAAATGAAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTTTGAGGCCACACAGGCCATTCCATCTATTCAAAAATGAAATTA  100

seq1  GGCTCCGTTTTTATAGGTTTGAAGCCATGGAAATTTGACCTCTATCTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCGTTTTTATAGGTTTGAAGCCATGGAAATTTGACCTCTATCTAGA  150

seq1  ACATCTTTATCCATCAAAATTATCAATACTGTGAGTAAGGGGTAGAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTTATCCATCAAAATTATCAATACTGTGAGTAAGGGGTAGAAAGT  200

seq1  TTGGCGTAAGTCACCAGAACGTATAATTTGTAAGGTCCTTTATCAAGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCGTAAGTCACCAGAACGTATAATTTGTAAGGTCCTTTATCAAGGTT  250

seq1  TCACAGATAAATTGGTTTTGCAAATGCATTTAGAGGAATAATTAACTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGATAAATTGGTTTTGCAAATGCATTTAGAGGAATAATTAACTTTG  300

seq1  AGGGTCAAAATGGAAGAGAACATATATATATATATATATATATATATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCAAAATGGAAGAGAACATATATATATATATATATATATATATATA  350

seq1  TATATATATATATATATATAGGCAATATAAGATTTTCATTCCTTATCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATAGGCAATATAAGATTTTCATTCCTTATCACA  400

seq1  GACTTTTTCCTCCTTTTCATTTCTGTTCGCTTATTATATATAGGGGAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTTCCTCCTTTTCATTTCTGTTCGCTTATTATATATAGGGGAGGC  450

seq1  TATTTCTTAAATCAAGTAAAGAGACATCATGATACACTAATTAAAATTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTAAATCAAGTAAAGAGACATCATGATACACTAATTAAAATTAT  500

seq1  ATCCTGGGAATTTTCAATATAAGTTTGTTAGAAACAAGTATTTCCCTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGGGAATTTTCAATATAAGTTTGTTAGAAACAAGTATTTCCCTGTA  550

seq1  GATATTTTGTTCTAAACTTTTGTAAACCTCACTTGTTATGCAGCAGGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTTGTTCTAAACTTTTGTAAACCTCACTTGTTATGCAGCAGGGAC  600

seq1  CCAAGGATAAAATGATATCTCAATTATAAATCCTGAGAGGAAAGCAGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGATAAAATGATATCTCAATTATAAATCCTGAGAGGAAAGCAGGTA  650

seq1  GAAAAATGAAGATACATTTCCTAGAAAATGAAACCTTGAGGAAGTAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATGAAGATACATTTCCTAGAAAATGAAACCTTGAGGAAGTAAAGA  700

seq1  CAGAAACATTAATTGGTATAATGCCAAGGTAATTATCACATGAACTTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACATTAATTGGTATAATGCCAAGGTAATTATCACATGAACTTGCT  750

seq1  GGGGAAAGTAAAGATATGCTTTGTACATGATGTCTTGGGTAACCATGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAGTAAAGATATGCTTTGTACATGATGTCTTGGGTAACCATGATG  800

seq1  TGCTAGCAATGCATAAGGAAAACAATATTAGTTTGTATTTCATACGTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGCAATGCATAAGGAAAACAATATTAGTTTGTATTTCATACGTCTC  850

seq1  ACAATAGATGAGTACATTTAACTGTTTAGAGAACTTGGATTTTTTTTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAGATGAGTACATTTAACTGTTTAGAGAACTTGGATTTTTTTTTTT  900

seq1  CCTCATCTGACAACTGGGAATCAGAGATGTCAGAAACATTTTGGAAGTCA  950
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCTGAC-ACTGGGAATCAGAGATGTCAGAAACATTTTGGAAGTCA  949

seq1  TCTTTCTTTGGCTATGGAGTTTCAAAGCAGTAACAGTATGGTGTTAC-TT  999
      ||||||||||||||||||||||||||||||||||||||| ||||||| ||
seq2  TCTTTCTTTGGCTATGGAGTTTCAAAGCAGTAACAGTAT-GTGTTACTTT  998

seq1  TTCCTCAACT-CCCCCCTCATGGGTAGAGAGCAGGAGGAAGCTTAGTACA  1048
      |||||||||| |||||||||||||||||||||| || ||||| || ||||
seq2  TTCCTCAACTCCCCCCCTCATGGGTAGAGAGCA-GAAGAAGC-TAATACA  1046

seq1  GCGCAGACAGTGAGCCAGTGCCCGTGGATTTCCTTCCCCTGAGCAATCCT  1098
      ||||| | |||||| ||||||| || ||||||||| ||||||||||||||
seq2  GCGCAAAAAGTGAG-CAGTGCCGGT-GATTTCCTT-CCCTGAGCAATCCT  1093

seq1  TTAGATATGTTCACTGCCAATGGAACTCACTCAATTCCGAGGCCAGACAT  1148
      ||||| |||||| ||||  |||  |||||||||| ||||||||   | ||
seq2  TTAGA-ATGTTC-CTGC--ATG--ACTCACTCAA-TCCGAGGC---AGAT  1133

seq1  CCCATCACCTC  1159
      |||||||||||
seq2  CCCATCACCTC  1144