BAC Information

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BAC

Clone NameB6Ng01-070E17
Chromosome17 (Build37)
Map Location 76,738,591 - 76,843,304
singlet/doubletdoublet
Overlap genenone
Upstream geneLtbp1, Rasgrp3, 2810405J04Rik, LOC668787, LOC100043885, LOC100043886
Downstream geneEG624348, LOC545234
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070E17.bB6Ng01-070E17.g
ACCDH888339DH888340
length1,1171,179
definitionDH888339|Mus musculus domesticus DNA, BAC clone: B6Ng01-070E17, 5' end.DH888340|Mus musculus domesticus DNA, BAC clone: B6Ng01-070E17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,738,591 - 76,739,708)(76,842,112 - 76,843,304)
sequence
gaattctaatgatagaattatctttgggttaaatctttatttttcttatt
taactgacatgctaatgatacaaagagatgttgggaaagaaaaagatgaa
aaataggatgcttacattgctattcaattaccaaaccagactatggacaa
aacactaaggaaaacatattaatttgaaaataatatgcagaaatttaaaa
tagttcacttttcaaacagcttgcagtttataacagtccacatttattta
aaaataaaacaaatatttataaagtaaatataataataagccaatatatt
tgtatttgaggtgtattactaataaagccatatgtgcatagatttaatta
cattaatttactacattaactcatagactgaaaaaagctggcagtttcca
tatgtataatttattttgaccaaaataaactaacactggaaatataaaaa
ccatgattcctgaagaagtcttttaattgaacatggagtaaatttctaga
gactcgtttcaaaaagcctgaaatcaggaaataagtagcaagacagatta
tttaatcagacatactatactggtaggattgggcagaggtggcttttctg
aggtcagaaactccatggcaaaccagttaaaggtgtgcagagaacaatgg
tggtttggccccatagatgtacagatgagggtgtggccccacagagggag
aggaagtggtcttggctcttgccagtttcatttaatttactacattaatt
catagactgaacaaagctggcagttttcatatgtataatttatttcaacc
aaaataaactaacactggaaatataaaaaccaatcattgtaactggacca
ctgtcattcttgtgacattctaaatgataacatttattcatttactctcc
ctttaagtcatacctttattgaatggttttacttcagagacttgaaaata
gttttgcttattttcaaagagttgttacttaaaatgcacatttttgcatg
tggtattggaactaaagtgtaaataatttctaccagtgaattttccttct
atgtagagtatcagccacagatgtacgacttgcttattatggtatttcaa
tttgttagctaaataca
gaattcagcacaaggcagggagtaaaggatagaaaacagaccaaatgtaa
ataagaactctgcaagaaggagtgtggaggcacagcatcatcaaataata
cactgcacaaccaggcctggcttttgtattagtattacattggacataag
aaaaaaatcaatggtcagtgtgaggtattcatttttctccagactcttgc
caaatcaggtgtccaacaacaaaatgggaggagagactgtgtatccaact
acgcatctcccttcctatatcatcttgaaaattgctcatgtgaatctctg
ctctctcatttttagttgcttctacaggagtatttctccaaatttaagac
tatacagtggttctaaaacattaataatatattttgtttatctttgagac
agaatcgtaggggatggagtgtagagttgaactcactgtgtagatgagaa
tgcccttggcctcctgaaccttttgccttcccctttctcgtgaacattac
caaccttcaatctgatgtaattgtctggatatctgtatacatctgaaatt
atatggaaatgtagctacctacacaaaggcattaggaagtagaaaatttg
ggaaaagagatcataaggcattactgtcagcaattagtgctcttccatag
gagtacagagaactggatctttccaccatgttaggacccagtgagatggc
aacatttgtaaaatagaacttttcagtagttagcccaataccttaacatt
gcaattttctgtgtgcagaggtgagaaaaattaatgtacaatgttcacaa
gccaccttatttatggcactggtttatagtagtcccaaacaggctataat
accttatatcaaaattcttatgtgacacttttccccctatgttactggca
attttaaattgtacatgtatttggtgatgaaatgacagctaaactaattg
tgaaaaggatacgatatgatgagaacagtacatagatgtctcctttatgt
tgaaatcgcaatgaacacgtagcaaagccttgcagtatcatttgtgtctc
caagtacaggattcagtggaaataagaggtctgaagagaatgaaagaacg
tttaggtaacaagtactaactagtgacttgtgggctttaagttacttctc
ttagtggaagaaataaggtgtattaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_76738591_76739708
seq2: B6Ng01-070E17.b_46_1162

seq1  GAATTCTAATGATAGAATTATCTTTGGGTTAAATCTTTATTTTTCTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATGATAGAATTATCTTTGGGTTAAATCTTTATTTTTCTTATT  50

seq1  TAACTGACATGCTAATGATACAAAGAGATGTTGGGAAAGAAAAAGATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGACATGCTAATGATACAAAGAGATGTTGGGAAAGAAAAAGATGAA  100

seq1  AAATAGGATGCTTACATTGCTATTCAATTACCAAACCAGACTATGGACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGGATGCTTACATTGCTATTCAATTACCAAACCAGACTATGGACAA  150

seq1  AACACTAAGGAAAACATATTAATTTGAAAATAATATGCAGAAATTTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTAAGGAAAACATATTAATTTGAAAATAATATGCAGAAATTTAAAA  200

seq1  TAGTTCACTTTTCAAACAGCTTGCAGTTTATAACAGTCCACATTTATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCACTTTTCAAACAGCTTGCAGTTTATAACAGTCCACATTTATTTA  250

seq1  AAAATAAAACAAATATTTATAAAGTAAATATAATAATAAGCCAATATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAACAAATATTTATAAAGTAAATATAATAATAAGCCAATATATT  300

seq1  TGTATTTGAGGTGTATTACTAATAAAGCCATATGTGCATAGATTTAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTGAGGTGTATTACTAATAAAGCCATATGTGCATAGATTTAATTA  350

seq1  CATTAATTTACTACATTAACTCATAGACTGAAAAAAGCTGGCAGTTTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATTTACTACATTAACTCATAGACTGAAAAAAGCTGGCAGTTTCCA  400

seq1  TATGTATAATTTATTTTGACCAAAATAAACTAACACTGGAAATATAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATAATTTATTTTGACCAAAATAAACTAACACTGGAAATATAAAAA  450

seq1  CCATGATTCCTGAAGAAGTCTTTTAATTGAACATGGAGTAAATTTCTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATTCCTGAAGAAGTCTTTTAATTGAACATGGAGTAAATTTCTAGA  500

seq1  GACTCGTTTCAAAAAGCCTGAAATCAGGAAATAAGTAGCAAGACAGATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCGTTTCAAAAAGCCTGAAATCAGGAAATAAGTAGCAAGACAGATTA  550

seq1  TTTAATCAGACATACTATACTGGTAGGATTGGGCAGAGGTGGCTTTTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCAGACATACTATACTGGTAGGATTGGGCAGAGGTGGCTTTTCTG  600

seq1  AGGTCAGAAACTCCATGGCAAACCAGTTAAAGGTGTGCAGAGAACAATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGAAACTCCATGGCAAACCAGTTAAAGGTGTGCAGAGAACAATGG  650

seq1  TGGTTTGGCCCCATAGATGTACAGATGAGGGTGTGGCCCCACAGAGGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGGCCCCATAGATGTACAGATGAGGGTGTGGCCCCACAGAGGGAG  700

seq1  AGGAAGTGGTCTTGGCTCTTGCCAGTTTCATTTAATTTACTACATTAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTGGTCTTGGCTCTTGCCAGTTTCATTTAATTTACTACATTAATT  750

seq1  CATAGACTGAACAAAGCTGGCAGTTTTCATATGTATAATTTATTTCAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGACTGAACAAAGCTGGCAGTTTTCATATGTATAATTTATTTCAACC  800

seq1  AAAATAAACTAACACTGGAAATATAAAAACCAATCATTGTAACTGGACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAACTAACACTGGAAATATAAAAACCAATCATTGTAACTGGACCA  850

seq1  CTGTCATTCTTGTGACATTCTAAATGATAACATTTATTCATTTACTCTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATTCTTGTGACATTCTAAATGATAACATTTATTCATTTACTCTCC  900

seq1  CTTTAAGTCATACCTTTATTGAATGGTTTTACTTCAGAGACTTGAAAATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGTCATACCTTTATTGAATGGTTTTACTTCAGAGACTTGAAAATA  950

seq1  GTTTTGCTTATTTTCAAAGAGTTGTTACTTAAAATGCACATTTTTGCATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGCTTATTTTCAAAGAGTTGTTACTTAAAATGCACATTTTTGCATG  1000

seq1  TGGTATTGGAACTAAAGTGTAAATAATTTCTACCAGTGAATTTCTCTTCT  1050
      |||||||||||||||||||||||||||||||||||||||||||  |||||
seq2  TGGTATTGGAACTAAAGTGTAAATAATTTCTACCAGTGAATTTTCCTTCT  1050

seq1  ATGTAGAGTATCAGCCACAGAATGTACGACTTGCTTATTAT-GTATATCA  1099
      |||||||||||||||||||| |||||||||||||||||||| |||| |||
seq2  ATGTAGAGTATCAGCCACAG-ATGTACGACTTGCTTATTATGGTATTTCA  1099

seq1  ATATGTTAGCTAAAATACA  1118
      || |||||||| |||||||
seq2  ATTTGTTAGCT-AAATACA  1117

seq1: chr17_76842112_76843304
seq2: B6Ng01-070E17.g_67_1245 (reverse)

seq1  TTTTAAATACACCCTAATCTTTTCCACTAAGAGAGATAAACTTAGAGCCC  50
      |||| |||||| ||| || | ||||||||||||| |  |||||| |||||
seq2  TTTTTAATACA-CCTTATTTCTTCCACTAAGAGA-AGTAACTTAAAGCCC  48

seq1  ACTAAGTTCACTAAGTTTAGTAACTTGGTTTACCTAAACGTTCTTTCATC  100
      || ||| ||||||   ||||| |||||  |||||||||||||||||||| 
seq2  AC-AAG-TCACTA--GTTAGT-ACTTG--TTACCTAAACGTTCTTTCATT  91

seq1  CTCTTCAGACCTCTTATTTTCCACTGAATCCTGTACTTGGAGACACAAAT  150
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTCTTCAGACCTCTTA-TTTCCACTGAATCCTGTACTTGGAGACACAAAT  140

seq1  GATACTGCAAGGCTTTGCTACGTGTTCATTGCGATTTTCAACATAAAGGA  200
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GATACTGCAAGGCTTTGCTACGTGTTCATTGCGA-TTTCAACATAAAGGA  189

seq1  GACATTCTATGTACTTGTTCTTCATCATATCGTATCCTTTTCACAATTAG  250
      |||| ||||||||| ||||| |||||||||||||||||||||||||||||
seq2  GACA-TCTATGTAC-TGTTC-TCATCATATCGTATCCTTTTCACAATTAG  236

seq1  TTTAGCTGTCATTTCATCACCAAATACATGTACAATTTAAAATTGCCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTGTCATTTCATCACCAAATACATGTACAATTTAAAATTGCCAGT  286

seq1  AACATAGGGGGAAAAGTGTCACATAAGAATTTTGATATAAGGTATTATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGGGGGAAAAGTGTCACATAAGAATTTTGATATAAGGTATTATAG  336

seq1  CCTGTTTGGGACTACTATAAACCAGTGCCATAAATAAGGTGGCTTGTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTGGGACTACTATAAACCAGTGCCATAAATAAGGTGGCTTGTGAA  386

seq1  CATTGTACATTAATTTTTCTCACCTCTGCACACAGAAAATTGCAATGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTACATTAATTTTTCTCACCTCTGCACACAGAAAATTGCAATGTTA  436

seq1  AGGTATTGGGCTAACTACTGAAAAGTTCTATTTTACAAATGTTGCCATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTGGGCTAACTACTGAAAAGTTCTATTTTACAAATGTTGCCATCT  486

seq1  CACTGGGTCCTAACATGGTGGAAAGATCCAGTTCTCTGTACTCCTATGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGTCCTAACATGGTGGAAAGATCCAGTTCTCTGTACTCCTATGGA  536

seq1  AGAGCACTAATTGCTGACAGTAATGCCTTATGATCTCTTTTCCCAAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACTAATTGCTGACAGTAATGCCTTATGATCTCTTTTCCCAAATTT  586

seq1  TCTACTTCCTAATGCCTTTGTGTAGGTAGCTACATTTCCATATAATTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTCCTAATGCCTTTGTGTAGGTAGCTACATTTCCATATAATTTCA  636

seq1  GATGTATACAGATATCCAGACAATTACATCAGATTGAAGGTTGGTAATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTATACAGATATCCAGACAATTACATCAGATTGAAGGTTGGTAATGT  686

seq1  TCACGAGAAAGGGGAAGGCAAAAGGTTCAGGAGGCCAAGGGCATTCTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGAGAAAGGGGAAGGCAAAAGGTTCAGGAGGCCAAGGGCATTCTCAT  736

seq1  CTACACAGTGAGTTCAACTCTACACTCCATCCCCTACGATTCTGTCTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACAGTGAGTTCAACTCTACACTCCATCCCCTACGATTCTGTCTCAA  786

seq1  AGATAAACAAAATATATTATTAATGTTTTAGAACCACTGTATAGTCTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAACAAAATATATTATTAATGTTTTAGAACCACTGTATAGTCTTAA  836

seq1  ATTTGGAGAAATACTCCTGTAGAAGCAACTAAAAATGAGAGAGCAGAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAGAAATACTCCTGTAGAAGCAACTAAAAATGAGAGAGCAGAGAT  886

seq1  TCACATGAGCAATTTTCAAGATGATATAGGAAGGGAGATGCGTAGTTGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGAGCAATTTTCAAGATGATATAGGAAGGGAGATGCGTAGTTGGA  936

seq1  TACACAGTCTCTCCTCCCATTTTGTTGTTGGACACCTGATTTGGCAAGAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGTCTCTCCTCCCATTTTGTTGTTGGACACCTGATTTGGCAAGAG  986

seq1  TCTGGAGAAAAATGAATACCTCACACTGACCATTGATTTTTTTCTTATGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGAAAAATGAATACCTCACACTGACCATTGATTTTTTTCTTATGT  1036

seq1  CCAATGTAATACTAATACAAAAGCCAGGCCTGGTTGTGCAGTGTATTATT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTAATACTAATACAAAAGCCAGGCCTGGTTGTGCAGTGTATTATT  1086

seq1  TGATGATGCTGTGCCTCCACACTCCTTCTTGCAGAGTTCTTATTTACATT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGATGCTGTGCCTCCACACTCCTTCTTGCAGAGTTCTTATTTACATT  1136

seq1  TGGTCTGTTTTCTATCCTTTACTCCCTGCCTTGTGCTGAATTC  1193
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTGTTTTCTATCCTTTACTCCCTGCCTTGTGCTGAATTC  1179