BAC Information

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BAC

Clone NameB6Ng01-072G20
Chromosome17 (Build37)
Map Location 33,920,150 - 33,920,624
singlet/doubletsinglet
Overlap genenone
Upstream gene9030612M13Rik, Zfp811, 6030490I01Rik, LOC631266, BC066107, Cyp4f14, Cyp4f13, 6030422M01Rik, Zfp472, C920016K16Rik, 1700065O13Rik, 4921501E09Rik, Zfp563, Morc2b, LOC100038859, LOC100038860, LOC100043474, Zfp422-rs1, Olfr63, LOC100043468, Zfp81, Zfp101, 1700029I08Rik, LOC100042953, Adamts10, Myo1f, Zfp414, Pram1, Hnrpm, March2, Rab11b, Angptl4
Downstream geneAnkrd47, Rps28, Ndufa7, Cd320, LOC100042967, LOC630219, LOC100042970, BC051226, Daxx, Zbtb22, Tapbp, Rgl2, H2-Ke2, Wdr46, B3galt4, Rps18, Vps52, EG630499, LOC100042989, AA388235, H2-K1, LOC654352, Ring1, H2-Ke6, Slc39a7, Rxrb, Col11a2, LOC672505, H2-Pa, H2-Oa, Brd2, LOC100043003, LOC100043522, H2-DMa, H2-DMb2, H2-DMb1, Psmb9, Tap1, Psmb8, Tap2, H2-Ob, H2-Ab1, H2-Aa, H2-Eb1, H2-Eb2, H2-Ea, Btnl2, LOC100038862, LOC667442, BC051142, EG632126, Btnl5, LOC624681, Btnl7, Notch4, Gpsm3, Pbx2, Ager, Rnf5, Agpat1, Egfl8, Ppt2, Prrt1, Fkbpl, Crebl1, Tnxb, EG632302, C4b, Stk19-ps1, Skiv2l-ps1, LOC100043024
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072G20.g
ACCDH889849
length469
definitionDH889849|Mus musculus domesticus DNA, BAC clone: B6Ng01-072G20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atcccttgatgagggttttctgcctactcttcctgtctgcctgtcactgc
tgctgggatcagcctggcaaaaggcccagctggtcaagtgtacaagcagt
ggcctgcatgtcagccttgaggcatgcagtttcagattccagaggtttgc
tgctggctcccagccctgctgactcaacttgggggtttttcagtcaattt
gccctaagggtcttcttgtcagacaggttttctgtgccaggcttcagggg
aactgtcagaaaaaggaacaccaatgcaaacttgttgaataaaaacttaa
ccaggcagcataaacaaggaaagctgtctgccccaccccagtcctctttt
gtctctgccttgtccctctcccctgctcaaaggtaggatttatacacaaa
ctaaaaaactcagtacaggatctaggctgtatggaatgagtgaatgaatg
gatgggtgtggaagggaaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_33920150_33920624
seq2: B6Ng01-072G20.g_70_544 (reverse)

seq1  TTTCCCTTCCACACCCATCCATTCATTCACTCATTCCATACAGCCTAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTCCACACCCATCCATTCATTCACTCATTCCATACAGCCTAGAT  50

seq1  CCTGTACTGAGTTTTTTAGTTTGTGTATAAATCCTACCTTTGAGCAGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACTGAGTTTTTTAGTTTGTGTATAAATCCTACCTTTGAGCAGGGG  100

seq1  AGAGGGACAAGGCAGAGACAAAAGAGGACTGGGGTGGGGCAGACAGCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGACAAGGCAGAGACAAAAGAGGACTGGGGTGGGGCAGACAGCTTT  150

seq1  CCTTGTTTATGCTGCCTGGTTAAGTTTTTATTCAACAAGTTTGCATTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTTATGCTGCCTGGTTAAGTTTTTATTCAACAAGTTTGCATTGGT  200

seq1  GTTCCTTTTTCTGACAGTTCCCCTGAAGCCTGGCACAGAAAACCTGTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTTTTCTGACAGTTCCCCTGAAGCCTGGCACAGAAAACCTGTCTG  250

seq1  ACAAGAAGACCCTTAGGGCAAATTGACTGAAAAACCCCCAAGTTGAGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAAGACCCTTAGGGCAAATTGACTGAAAAACCCCCAAGTTGAGTCA  300

seq1  GCAGGGCTGGGAGCCAGCAGCAAACCTCTGGAATCTGAAACTGCATGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGCTGGGAGCCAGCAGCAAACCTCTGGAATCTGAAACTGCATGCCT  350

seq1  CAAGGCTGACATGCAGGCCACTGCTTGTACACTTGACCAGCTGGGCCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTGACATGCAGGCCACTGCTTGTACACTTGACCAGCTGGGCCTTT  400

seq1  TGCCAGGCTGATCCCAGCAGCAGTGACAGGCAGACAGGAAGAGTAGGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGCTGATCCCAGCAGCAGTGACAGGCAGACAGGAAGAGTAGGCAG  450

seq1  AAAACCCTCAACAAGGGATGAATTC  475
      |||||||||| ||||||||||||||
seq2  AAAACCCTCATCAAGGGATGAATTC  475