BAC Information

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BAC

Clone NameB6Ng01-074P04
Chromosome17 (Build37)
Map Location 92,967,666 - 92,968,893
singlet/doubletsinglet
Overlap geneLOC676141
Upstream geneLOC100043742, EG640442, LOC627395
Downstream geneLOC668877, LOC100043746, LOC100043747, LOC100043748, LOC100043907, Adcyap1, LOC676157, LOC627503
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074P04.bB6Ng01-074P04.g
ACCDH891656DH891657
length1,2261,161
definitionDH891656|Mus musculus domesticus DNA, BAC clone: B6Ng01-074P04, 5' end.DH891657|Mus musculus domesticus DNA, BAC clone: B6Ng01-074P04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccactttataattgtggtttgtagctttataagctgagtggtttt
tgaaaataaacaaggcctatcagatctatttggtgtcattccttaacttg
tctctttccttacattctcactccctccctggagacccacactgtttagc
cctacagttcaaggcagtgctgaggacttcctcaaattgagattgtctgt
tcattctaagcctgatatttagttcaaagatagcttttgccagagctttg
taaagtggtgtatctttatgtgctattaattttattttaagtaacccatt
gaaactttcaatactgcctgctgctgttgggttataggccaagtagaatt
cccacattatgtcaagatttttttttgccagtctctgtatgattttacta
gtgtaattgattccttgatcactttatattagtagaggcataccatagtc
tgaaatccatgatcacaatgtaaatcttgttagtttttggtctggtttgg
gtcttgatttatccagacctaatcctgtgaagacatcaactattgtgcat
gcatgttgtttcttaaatgtgtttaattgttctacacaatcaatttggat
tgtgtaattaaaatgtagtctatgattgcttattccatgataattatgtt
caagtctggttttctttgcaaggcatccttcatatttctgcatgtcattc
ttaattttactccatgttatggctatattactttcagtgaatcactggta
tgttgcatgaatcactggtatgttgcatgaatcactggtatgttcatgtc
caaggaatttatgtattttctctatttcttctcttgtaatctctacctct
gtggggggagtcactttggttcatttccccttaattttaagatttgtagg
tcctgtctgttggctttggtaatgtgccttaagttatattgccataccta
tcaacctgtctgcttcataattatatttagtttgtaggtcatcctttgtt
ttggtgggcgtctacatgaaatactttagttcttatgtccttaactgaat
ttgagctttcttcattccaagcttctttagactattagtctttttccatt
gaatttttccactctgttaggctcatttttttctgacaattgctatttct
gttgccatgaccggatctggtaaaaggtgttaggtccttccatcttgcga
actgttctagcagccaatagctgtta
gaattctcacctgaggaatacccaatggctgagaagcaccagaaaaaatg
ttcagcattcttaatcatcaggaaaatggaaatcaaaacaaccctgagat
tacacctcacaccagccagaatggctaagatcaaaaattcaggtgtcagc
agatgctggcaagaatgtggagaaagaggaacactcctccattgttggta
gaattgcaagcttgtacaaccactatggaaatcagtctcgtggttcctca
gaaaattggacatagtactactggaagatccagcaatacctctcctgtgc
atatatcaagaagattttccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttgtaatagccagaagctgtaaagaaccccgat
gccccccaacataggaatggatacagaaaatgtgggacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atgaatggacctggagcgtctcatcctgagtgaggtaactcaatcacaaa
agaactcacatgatatgtactcactgatatgtggatattagcccggaaac
ttataataaccaagatacagaatacaatttgcaaaacacatgaaattcta
gaagaacgaagatgaaagtgtgagcactttgttccttcttagaattggga
acataacacccaaggaaggagttccagagacaaaaattggagctgagaca
aaaggatggaccatctagagactgccatacccggagatccatcccataat
gagcccccaaacgctgacaccattgcacacactagcaagattttgctgaa
aggaccctgatatagctgtcttttgtgaggctatgctggggcccagcaaa
cacaggagtggatgctcacagtcagctattggatggatcacaggccccaa
tggaggagctagagaaagtacccacggagctaaagaatctcaaccctata
ggtggaacaacatatgaactacagtacccccagaactcgtgtcttctagc
tgcatattgtatcagaagaatgactattcgtcatcagtgaaaggaaggtc
atacttgaactttatatgcctcagtacaggaacccagacaagatggaatt
gtgggggagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_92967666_92968893
seq2: B6Ng01-074P04.b_48_1273 (reverse)

seq1  TAACAGCACTATTGGCTGCTAG-ACAGTCCCGCAAGGATGGAAAGGACTT  49
      ||||||  |||||||||||||| |||||  ||||| ||||||| |  || 
seq2  TAACAG--CTATTGGCTGCTAGAACAGT-TCGCAA-GATGGAAGGACCTA  46

seq1  ACACCTTTTTACAGATTCTCGGTGCATGGCCAACAG-AATAGCAATTTGG  98
      |||||||||  |||||   |||| ||||| |||||| ||||||||||  |
seq2  ACACCTTTTACCAGAT--CCGGT-CATGG-CAACAGAAATAGCAATT--G  90

seq1  TCAG-AAAAAATGAGACTAACAGAGTGGAAAAAATCAATGG-AAAAGACT  146
      |||| |||||||||| ||||||||||||||||| ||||||| ||||||||
seq2  TCAGAAAAAAATGAGCCTAACAGAGTGGAAAAATTCAATGGAAAAAGACT  140

seq1  TATAGTCTAAAGAAGCTTGG-ATGGAGAAAGCTCAAA-TCAGTTAA-GAC  193
       ||||||||||||||||||| ||| |||||||||||| |||||||| |||
seq2  AATAGTCTAAAGAAGCTTGGAATGAAGAAAGCTCAAATTCAGTTAAGGAC  190

seq1  ATAAGAACTAAAGTATATCATGTAGACGCCCACCAAAACAAA-GATGACC  242
      |||||||||||||||| ||||||||||||||||||||||||| |||||||
seq2  ATAAGAACTAAAGTATTTCATGTAGACGCCCACCAAAACAAAGGATGACC  240

seq1  TACAAACTAAATATAATTATGAAGCAGACAGGTTGATAGGTATGGCAATA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACTAAATATAATTATGAAGCAGACAGGTTGATAGGTATGGCAATA  290

seq1  TAACTTAAGGCACATTACCAAAGCCAACAGACAGGACCTACAAATCTTAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTAAGGCACATTACCAAAGCCAACAGACAGGACCTACAAATCTTAA  340

seq1  AATTAAGGGGAAATGAACCAAAGTGACTCCCCCCACAGAGGTAGAGATTA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGGGGAAATGAACCAAAGTGACTCCCCCCACAGAGGTAGAGATTA  390

seq1  CAAGAGAAGAAATAGAGAAAATACATAAATTCCTTGGACATGAACATACC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAAGAAATAGAGAAAATACATAAATTCCTTGGACATGAACATACC  440

seq1  AGTGATTCATGCAACATACCAGTGATTCATGCAACATACCAGTGATTCAC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTCATGCAACATACCAGTGATTCATGCAACATACCAGTGATTCAC  490

seq1  TGAAAGTAATATAGCCATAACATGGAGTAAAATTAAGAATGACATGCAGA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTAATATAGCCATAACATGGAGTAAAATTAAGAATGACATGCAGA  540

seq1  AATATGAAGGATGCCTTGCAAAGAAAACCAGACTTGAACATAATTATCAT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAAGGATGCCTTGCAAAGAAAACCAGACTTGAACATAATTATCAT  590

seq1  GGAATAAGCAATCATAGACTACATTTTAATTACACAATCCAAATTGATTG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAAGCAATCATAGACTACATTTTAATTACACAATCCAAATTGATTG  640

seq1  TGTAGAACAATTAAACACATTTAAGAAACAACATGCATGCACAATAGTTG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAACAATTAAACACATTTAAGAAACAACATGCATGCACAATAGTTG  690

seq1  ATGTCTTCACAGGATTAGGTCTGGATAAATCAAGACCCAAACCAGACCAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTCACAGGATTAGGTCTGGATAAATCAAGACCCAAACCAGACCAA  740

seq1  AAACTAACAAGATTTACATTGTGATCATGGATTTCAGACTATGGTATGCC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAACAAGATTTACATTGTGATCATGGATTTCAGACTATGGTATGCC  790

seq1  TCTACTAATATAAAGTGATCAAGGAATCAATTACACTAGTAAAATCATAC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTAATATAAAGTGATCAAGGAATCAATTACACTAGTAAAATCATAC  840

seq1  AGAGACTGGCAAAAAAAAATCTTGACATAATGTGGGAATTCTACTTGGCC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTGGCAAAAAAAAATCTTGACATAATGTGGGAATTCTACTTGGCC  890

seq1  TATAACCCAACAGCAGCAGGCAGTATTGAAAGTTTCAATGGGTTACTTAA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACCCAACAGCAGCAGGCAGTATTGAAAGTTTCAATGGGTTACTTAA  940

seq1  AATAAAATTAATAGCACATAAAGATACACCACTTTACAAAGCTCTGGCAA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATTAATAGCACATAAAGATACACCACTTTACAAAGCTCTGGCAA  990

seq1  AAGCTATCTTTGAACTAAATATCAGGCTTAGAATGAACAGACAATCTCAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATCTTTGAACTAAATATCAGGCTTAGAATGAACAGACAATCTCAA  1040

seq1  TTTGAGGAAGTCCTCAGCACTGCCTTGAACTGTAGGGCTAAACAGTGTGG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGAAGTCCTCAGCACTGCCTTGAACTGTAGGGCTAAACAGTGTGG  1090

seq1  GTCTCCAGGGAGGGAGTGAGAATGTAAGGAAAGAGACAAGTTAAGGAATG  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCAGGGAGGGAGTGAGAATGTAAGGAAAGAGACAAGTTAAGGAATG  1140

seq1  ACACCAAATAGATCTGATAGGCCTTGTTTATTTTCAAAAACCACTCAGCT  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAAATAGATCTGATAGGCCTTGTTTATTTTCAAAAACCACTCAGCT  1190

seq1  TATAAAGCTACAAACCACAATTATAAAGTGGAATTC  1228
      ||||||||||||||||||||||||||||||||||||
seq2  TATAAAGCTACAAACCACAATTATAAAGTGGAATTC  1226