BAC Information

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BAC

Clone NameB6Ng01-075O23
Chromosome17 (Build37)
Map Location 57,892,682 - 57,893,117
singlet/doubletsinglet
Overlap genenone
Upstream geneNrtn, Dus3l, Gm546, Rfx2, Acsbg2, 1700061G19Rik, Mllt1, Asah3, Clpp, Alkbh7, Pspn, Gtf2f1, Khsrp, Slc25a41, Slc25a23, Crb3, Dennd1c, Tubb4, Tnfsf9, Cd70, Tnfsf14, C3, Gpr108, Trip10, LOC668635, Vav1, Emr1, EG224916
Downstream geneCntnap5c, LOC674419, LOC620408, EG545216
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075O23.bB6Ng01-075O23.g
ACCDH892353DH892354
length1,1171,079
definitionDH892353|Mus musculus domesticus DNA, BAC clone: B6Ng01-075O23, 5' end.DH892354|Mus musculus domesticus DNA, BAC clone: B6Ng01-075O23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcattttaaaagaaaaatagtctttgccatattattctgtcaaa
ttaataaaaataaattttatatattttgtaacttttttggagtttaaaca
tttttattaattaattaattaattttattacactacatattttattctcc
cccatccacactccaactgctcaacatcccacatctcctccccaccccaa
actgtctctacatgaatgtactcacctcccctacccacctgacctctaaa
tgctccgaggcctccagtctcttgagggttaggtacatcatctctgaatg
aacaaagacctggaagtcttctactgtgtgcgtgttgggggccgcacatc
agctggcgtatgctgcctcttgggtggtccaatgtttgagagatctcggg
gtgcagatcgggactgctggttctacagggtcgcccttctcctcagcttc
ttgcagttttctttaattcaataacaagggtcagctgcttctgtccattg
gttgggtgcaaatatctgcctcagattctttcagctacttattggatctt
tcacagggcagtcaaaagaggtcccagtttgtgagctctccatagcccca
ttaattgtgtcaggccttgggagcattccttgagctggattccactttgg
ccctgttgctgggccttcttttcctcaggttcctatccatttccaaccct
aaaattctttcagacagaaacaattatgggtcagagttttgactgtgggc
tggcaaacccatccctcacttgatgccctgccttcctgctgaaggtggga
tctataagttcccttttcctactgtcaggcatttcatctaaggtccctcc
cattgagtcctgggagtctctcacctctcatgtttctggtgcaatctgga
gggtaccccagccacccatctccagaggtttcctgtttccattctttctg
ttgaccctcagggcttcaccactttccttgtccataccagatcatgttcc
ctctctctgcactccacccccctccatctactttccctctcaatccctcc
cttccctctacacttgtgattacctttctttctcctcttctccccagagg
tggacctgggaggggtc
gaattctcatctgaggaataccgaatggctgagaagtacctaaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaatcctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgttggcgaggatgtggagaaagaggaaaactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggaggttcctca
gaaaattggacatagttctagccttccctcccccagccttactggttcca
ctgtttacacctggatggagtttgctggctcaatcattctgccacaccca
ctactggaacctgcagctttgctgttcggagccttacacatggtcaccct
gctactggattccaagattatttggcagaaatcgggcccctcccccttcc
ttcaaaactgagtgccggaatagtaaaaattgaaccttgagcagagactt
ttgtcttggttccttccttatctcgcacagcccagcccctcttctcttcc
aggtttccaaaatgccttttcaggctagaacccaaacctgtgatctgctg
gccagacacaacacatagtaataccagagggtcccacaatacctctcctg
gcatatatccagaagatgttccaactggtaagaaggacacttgctccact
atgttcatagcagccttatttataatagccagaagttggaaagaacccag
atgcccctcaacagaggaatgaatacagaaaatgtaaatttacataatgg
agctcataaaaatacatactcagctctttaaaagaatgaatttatgaaat
ttcctaggcaaatggatggacctggagggcatcatcctgagtggggtaac
tcaatcacaaagaactcacacaatctgtactcactgataagtggatatag
cccagaaacttagaatacccaagatataggatacatctgcaaacacatga
aactcaggagacacaacccaagtgtggaacaccttttgcctcttcttaga
attgggaacaaaaccaccctatggaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_57892682_57893117
seq2: B6Ng01-075O23.g_706_1148 (reverse)

seq1  TCCTTCCAT-GGGT-GTTTTGTTCCCAATTCTAAGAAGGGGCAAA--GTG  46
      | ||||||| |||| ||||||||||||||||||||||| ||||||  |||
seq2  TTCTTCCATAGGGTGGTTTTGTTCCCAATTCTAAGAAGAGGCAAAAGGTG  50

seq1  -TCCACACTTTGGCCTTCATTTTTCTTGAGTTTCATGCGTTTAGCAAATT  95
       ||||||||| ||   |  | | || ||||||||||| |||| ||| | |
seq2  TTCCACACTTGGG---TTGTGTCTCCTGAGTTTCATGTGTTT-GCAGA-T  95

seq1  GTATCTTATATCTTGGGTATCCTAAGTTTCTGGGCTAATATCCACTTATC  145
      ||||| |||||||||||||| ||||||||||||||| |||||||||||||
seq2  GTATCCTATATCTTGGGTATTCTAAGTTTCTGGGCT-ATATCCACTTATC  144

seq1  AGTGAGTACATATTGTGTGAGTTCCTTTGTGATTGGGTTACCTCACTCAG  195
      |||||||||| |||||||||||| ||||||||||| |||||| |||||||
seq2  AGTGAGTACAGATTGTGTGAGTT-CTTTGTGATTGAGTTACCCCACTCAG  193

seq1  GATGATGCCCTCCAGGTCCAACCATTTGCCTAGG-AATTTCATAAATTCA  244
      |||||||||||||||||||| ||||||||||||| |||||||||||||||
seq2  GATGATGCCCTCCAGGTCCATCCATTTGCCTAGGAAATTTCATAAATTCA  243

seq1  TTCTTTTTAATAGCTGAGTA-GTA----------CTCCATTGTGTAAATG  283
      ||||||| || ||||||||| |||          ||||||| ||||||| 
seq2  TTCTTTTAAAGAGCTGAGTATGTATTTTTATGAGCTCCATTATGTAAATT  293

seq1  TACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTT  333
      |   ||||||||||||| ||||||||||||||||||||||||||||||||
seq2  T---ACATTTTCTGTATTCATTCCTCTGTTGAGGGGCATCTGGGTTCTTT  340

seq1  CCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATG  383
      ||| |||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCAACTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCAAG  390

seq1  TGTCCTTCTTATCGGTTGGGACATCTTCTGGATATATGCCCAGAGAGGTA  433
      ||||||||||| | ||||| ||||||||||||||||||||  ||||||||
seq2  TGTCCTTCTTACCAGTTGGAACATCTTCTGGATATATGCCAGGAGAGGTA  440

seq1  TTG  436
      |||
seq2  TTG  443