BAC Information

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BAC

Clone NameB6Ng01-077J01
Chromosome17 (Build37)
Map Location 66,306,191 - 66,502,390
singlet/doubletdoublet
Overlap geneAnkrd12, 5430411C19Rik, Ndufv2, ORF19, Ddx11
Upstream geneE130009J12Rik, LOC668655, LOC674701, Vapa, Txndc2, Rab31, Ppp4r1, Ralbp1, LOC100043873, LOC100043592, Twsg1
Downstream geneLOC100043599, LOC100043875, 1110012J17Rik, LOC100043876, Rab12, 9130404H23Rik, Ptprm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077J01.bB6Ng01-077J01.g
ACCDH893505DH893506
length492616
definitionDH893505|Mus musculus domesticus DNA, BAC clone: B6Ng01-077J01, 5' end.DH893506|Mus musculus domesticus DNA, BAC clone: B6Ng01-077J01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,306,191 - 66,306,688)(66,501,775 - 66,502,390)
sequence
catctgtgttttcaggggctggaactacaggcaggctgctgggctagccc
agtgtttccatggatgctggtgatctgaactcaggtcctcttgctcacct
agaaactaggctttaaaaaacggagtcatctcagctgcacacattgttct
ttgaaggccagacccacgacgtgaggaggaaagaaggcaaggcaaggcaa
tgggatgaatgccaccggagaccaagccacgggcagccgcactggttcat
cctcctttgcctctgtgaccatattctgtggccctgcggttgcgcaactg
aagcgtgaggaatccgctgatattttgcttggggcccgacttcagaaatg
tgctctctgatattaatcaccaggagagtgagcataattggctggctctg
aagcaaaggctggaagataccagcggacaacagatccaactgaacttgag
ccaggaggaggagcaggagcaggagcagggggagggggaggg
gaattcctaagtgatcttcacgtatcactggaacctgagaggttggaaaa
gctggcaggcctcggccaagcagcctaggcttgtcctgcagatgaccctc
tctaggcacgaggagtctccaggtttccagcaagggcagaaaccgtgtgg
tagggcctccttgtgtacacagagaaagatatccaggccaagccttccac
tgtgcttagggcatgagcacagtagtagtgagatcagtttctgggaatcc
tttaacctgggtccaggttgagttcccatagaggactacatagagcaact
tcaggaaggaggactgggttggactgaagataaggggaggagccctgcac
tgaaatgctgtctcccagcacttggctgatcagtgagtgggagggagtgg
atgacatggagtggatgcgtgtttagcacttggctgatcagtgagtggga
gggagtggatgcgtgtttagggctgggctgggcactttgacctttatgtt
ttggtatgaacacggatacccagacacataccctggctgtcatgttaaaa
taagagttctccataaagagctcatgtacatgtgtcctgcagcttccaag
ggaggccaaacatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_66306191_66306688
seq2: B6Ng01-077J01.b_45_542

seq1  GAATTCCATCTGTGTTTTCAGGGGCTGGAACTACAGGCAGGCTGCTGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTGTGTTTTCAGGGGCTGGAACTACAGGCAGGCTGCTGGGC  50

seq1  TAGCCCAGTGTTTCCATGGATGCTGGTGATCTGAACTCAGGTCCTCTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCAGTGTTTCCATGGATGCTGGTGATCTGAACTCAGGTCCTCTTGC  100

seq1  TCACCTAGAAACTAGGCTTTAAAAAACGGAGTCATCTCAGCTGCACACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTAGAAACTAGGCTTTAAAAAACGGAGTCATCTCAGCTGCACACAT  150

seq1  TGTTCTTTGAAGGCCAGACCCACGACGTGAGGAGGAAAGAAGGCAAGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTTGAAGGCCAGACCCACGACGTGAGGAGGAAAGAAGGCAAGGCA  200

seq1  AGGCAATGGGATGAATGCCACCGGAGACCAAGCCACGGGCAGCCGCACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATGGGATGAATGCCACCGGAGACCAAGCCACGGGCAGCCGCACTG  250

seq1  GTTCATCCTCCTTTGCCTCTGTGACCATATTCTGTGGCCCTGCGGTTGCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATCCTCCTTTGCCTCTGTGACCATATTCTGTGGCCCTGCGGTTGCG  300

seq1  CAACTGAAGCGTGAGGAATCCGCTGATATTTTGCTTGGGGCCCGACTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGAAGCGTGAGGAATCCGCTGATATTTTGCTTGGGGCCCGACTTCA  350

seq1  GAAATGTGCTCTCTGATATTAATCACCAGGAGAGTGAGCATAATTGGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTGCTCTCTGATATTAATCACCAGGAGAGTGAGCATAATTGGCTG  400

seq1  GCTCTGAAGCAAAGGCTGGAAGATACCAGCGGACAACAGATCCAACTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGAAGCAAAGGCTGGAAGATACCAGCGGACAACAGATCCAACTGAA  450

seq1  CTTGAGCCAGGAGGAGGAGCAGGAGCAGGAGCAGGGGGAGGGGGAGGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGCCAGGAGGAGGAGCAGGAGCAGGAGCAGGGGGAGGGGGAGGG  498

seq1: chr17_66501775_66502390
seq2: B6Ng01-077J01.g_68_683 (reverse)

seq1  TGCTTGTTTGGCCTCCCTTGGAAGCTGCAGGACACATGTACATGAGCTCT  50
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTTTGGCCTCCCTTGGAAGCTGCAGGACACATGTACATGAGCTCT  50

seq1  TTATGGAGAACTCTTCTTTTAACATGACAGCCAGGGTATGTGTCTGGGTA  100
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTATGGAGAACTCTTATTTTAACATGACAGCCAGGGTATGTGTCTGGGTA  100

seq1  TCCGTGTTCATACCAAAACATAAAGGTCAAAGTGCCCAGCCCAGCCCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTGTTCATACCAAAACATAAAGGTCAAAGTGCCCAGCCCAGCCCTAA  150

seq1  ACACGCATCCACTCCCTCCCACTCACTGATCAGCCAAGTGCTAAACACGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGCATCCACTCCCTCCCACTCACTGATCAGCCAAGTGCTAAACACGC  200

seq1  ATCCACTCCATGTCATCCACTCCCTCCCACTCACTGATCAGCCAAGTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTCCATGTCATCCACTCCCTCCCACTCACTGATCAGCCAAGTGCT  250

seq1  GGGAGACAGCATTTCAGTGCAGGGCTCCTCCCCTTATCTTCAGTCCAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGACAGCATTTCAGTGCAGGGCTCCTCCCCTTATCTTCAGTCCAACC  300

seq1  CAGTCCTCCTTCCTGAAGTTGCTCTATGTAGTCCTCTATGGGAACTCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTCCTTCCTGAAGTTGCTCTATGTAGTCCTCTATGGGAACTCAAC  350

seq1  CTGGACCCAGGTTAAAGGATTCCCAGAAACTGATCTCACTACTACTGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACCCAGGTTAAAGGATTCCCAGAAACTGATCTCACTACTACTGTGC  400

seq1  TCATGCCCTAAGCACAGTGGAAGGCTTGGCCTGGATATCTTTCTCTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCCCTAAGCACAGTGGAAGGCTTGGCCTGGATATCTTTCTCTGTGT  450

seq1  ACACAAGGAGGCCCTACCACACGGTTTCTGCCCTTGCTGGAAACCTGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGGAGGCCCTACCACACGGTTTCTGCCCTTGCTGGAAACCTGGAG  500

seq1  ACTCCTCGTGCCTAGAGAGGGTCATCTGCAGGACAAGCCTAGGCTGCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTCGTGCCTAGAGAGGGTCATCTGCAGGACAAGCCTAGGCTGCTTG  550

seq1  GCCGAGGCCTGCCAGCTTTTCCAACCTCTCAGGTTCCAGTGATACGTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGAGGCCTGCCAGCTTTTCCAACCTCTCAGGTTCCAGTGATACGTGAA  600

seq1  GATCACTTAGGAATTC  616
      ||||||||||||||||
seq2  GATCACTTAGGAATTC  616