BAC Information

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BAC

Clone NameB6Ng01-079D24
Chromosome17 (Build37)
Map Location 59,360,196 - 59,495,902
singlet/doubletdoublet
Overlap genenone
Upstream geneCntnap5c, LOC620408, EG545216, LOC668648, 2610034M16Rik, Nudt12, 4930505H01Rik
Downstream geneLOC100043537, LOC100043542
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079D24.bB6Ng01-079D24.g
ACCDH894714DH894715
length1,178360
definitionDH894714|Mus musculus domesticus DNA, BAC clone: B6Ng01-079D24, 5' end.DH894715|Mus musculus domesticus DNA, BAC clone: B6Ng01-079D24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,360,196 - 59,361,368)(59,495,543 - 59,495,902)
sequence
gaattccatgtattcatgtttactaaagaagtaaatattaatgaagttca
caattatctcaatggaaagatttttaaatgcatcataaaatagcttggta
atgaatgaataatcaataaatatcatgctttaactctttctcctttacca
ttgtagtcttattgatctactttggtttgctatgtccataaacaacaatt
actacccgaggctgagataccttctctcaggcttgtatacaattgtgaat
aactgcccaatttaagccttaaataccttgatggaaatctcctgttccct
acaaattctagtagaagaggaattagttggagctagataacaataaattt
ggaaaataaactcacttttgccatataagtatatttatcatcttaattac
tatatgctgctttaccctaggcatggtaacttctttgtttctcaacttaa
ggaactgttgtttaaagaagttaaattattttagattacagcagccttga
ataataaaaagcattaggtcagagatttccctaaatttcttaagttttgg
tacacataggttgatgcctctcattactatgcccagtacttggaaataat
ataattggatacctaaaagtaagctaactttctctaagcctcagtaactg
gttttgaaactgtcatttaattacattttcccctgccttttcctctcacc
aaccctcttcacatgttcttcctttctctcctttctgttgatagagggaa
gaaaggtgatggtttgagaaggtccttctgtgaaacaatgctgttctccc
aggttttctatctttagttcctgaaccttgccataccaggctgcatgaga
ttatgtaaatcagtgtttcagtatatcctctagcctgtagcttgaaaact
cttcttagcttgggcctttctgtgctttacccaatggagaaaatttcaga
aaatattacttaaaaatagacagattgcatttagccttatgtgaatgttc
tttatgtcatgtcatgtctttactgacctatttcctctgagaaaaactag
gtctgctggagtaaacatcactggtagggtctccatctgagcaatagaaa
tatgatatattcgtcctcatgaaagtcttatttatctttataaaaagttg
acttcattatgtagtcagttacggatta
acagactacggaaaggttattttcaaaagaaagttttcttacaggaccca
ggaacttcagggaagtcttgcagtcctcctgaacatcagagaagggacct
caggagaaggagagggtcatagactggcaccttagggttaatgagcttta
tgggtttgagaaatggggttgataagctgcttcacctgttggacatttca
aggtatccagtgtcttttcagttttgatcaaatgctcaagcagtctcagg
gcagaggcgctcatttgggtgaagagataagaagccaaaagttactctgt
aatctgcctttagcaaaggcaaaatagagtaggagtagagagaagaggag
aggaggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_59360196_59361368
seq2: B6Ng01-079D24.b_47_1224

seq1  GAATTCCATGTATTCATGTTTACTAAAGAAGTAAATATTAATGAAGTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTATTCATGTTTACTAAAGAAGTAAATATTAATGAAGTTCA  50

seq1  CAATTATCTCAATGGAAAGATTTTTAAATGCATCATAAAATAGCTTGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATCTCAATGGAAAGATTTTTAAATGCATCATAAAATAGCTTGGTA  100

seq1  ATGAATGAATAATCAATAAATATCATGCTTTAACTCTTTCTCCTTTACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGAATAATCAATAAATATCATGCTTTAACTCTTTCTCCTTTACCA  150

seq1  TTGTAGTCTTATTGATCTACTTTGGTTTGCTATGTCCATAAACAACAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGTCTTATTGATCTACTTTGGTTTGCTATGTCCATAAACAACAATT  200

seq1  ACTACCCGAGGCTGAGATACCTTCTCTCAGGCTTGTATACAATTGTGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCCGAGGCTGAGATACCTTCTCTCAGGCTTGTATACAATTGTGAAT  250

seq1  AACTGCCCAATTTAAGCCTTAAATACCTTGATGGAAATCTCCTGTTCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCCCAATTTAAGCCTTAAATACCTTGATGGAAATCTCCTGTTCCCT  300

seq1  ACAAATTCTAGTAGAAGAGGAATTAGTTGGAGCTAGATAACAATAAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTCTAGTAGAAGAGGAATTAGTTGGAGCTAGATAACAATAAATTT  350

seq1  GGAAAATAAACTCACTTTTGCCATATAAGTATATTTATCATCTTAATTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATAAACTCACTTTTGCCATATAAGTATATTTATCATCTTAATTAC  400

seq1  TATATGCTGCTTTACCCTAGGCATGGTAACTTCTTTGTTTCTCAACTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGCTGCTTTACCCTAGGCATGGTAACTTCTTTGTTTCTCAACTTAA  450

seq1  GGAACTGTTGTTTAAAGAAGTTAAATTATTTTAGATTACAGCAGCCTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGTTGTTTAAAGAAGTTAAATTATTTTAGATTACAGCAGCCTTGA  500

seq1  ATAATAAAAAGCATTAGGTCAGAGATTTCCCTAAATTTCTTAAGTTTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAAAAGCATTAGGTCAGAGATTTCCCTAAATTTCTTAAGTTTTGG  550

seq1  TACACATAGGTTGATGCCTCTCATTACTATGCCCAGTACTTGGAAATAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATAGGTTGATGCCTCTCATTACTATGCCCAGTACTTGGAAATAAT  600

seq1  ATAATTGGATACCTAAAAGTAAGCTAACTTTCTCTAAGCCTCAGTAACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGGATACCTAAAAGTAAGCTAACTTTCTCTAAGCCTCAGTAACTG  650

seq1  GTTTTGAAACTGTCATTTAATTACATTTTCCCCTGCCTTTTCCTCTCACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAAACTGTCATTTAATTACATTTTCCCCTGCCTTTTCCTCTCACC  700

seq1  AACCCTCTTCACATGTTCTTCCTTTCTCTCCTTTCTGTTGATAGAGGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTCTTCACATGTTCTTCCTTTCTCTCCTTTCTGTTGATAGAGGGAA  750

seq1  GAAAGGTGATGGTTTGAGAAGGTCCTTCTGTGAAACAATGCTGTTCTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTGATGGTTTGAGAAGGTCCTTCTGTGAAACAATGCTGTTCTCCC  800

seq1  AGGTTTTCTATCTTTAGTTCCTGAACCTTGCCATACCAGGCTGCATGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTCTATCTTTAGTTCCTGAACCTTGCCATACCAGGCTGCATGAGA  850

seq1  TTATGTAAATCAGTGTTTCAGTATATCCTCTAGCCTGTAGCTTGAAAAAC  900
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTATGTAAATCAGTGTTTCAGTATATCCTCTAGCCTGTAGCTTG-AAAAC  899

seq1  TCTTCTTAGCTT-GGCCTTTCTGTGCTTTACCCAATGGAGAAAATTTCAG  949
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTAGCTTGGGCCTTTCTGTGCTTTACCCAATGGAGAAAATTTCAG  949

seq1  AAAATATTACTTAAAAATAGACAGATTGCATTTAGCCTTATGTGAATGTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTACTTAAAAATAGACAGATTGCATTTAGCCTTATGTGAATGTT  999

seq1  CTTTATGTCATGTCATGTCTTTACTGACCTATTTCCTCTGAGATAAACTA  1049
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTTTATGTCATGTCATGTCTTTACTGACCTATTTCCTCTGAGAAAAACTA  1049

seq1  GGTCTGCT-GAGTAAACATCACTGGTAGGGTCT-CATCTGAGCAATAG-A  1096
      |||||||| |||||||||||||||||||||||| |||||||||||||| |
seq2  GGTCTGCTGGAGTAAACATCACTGGTAGGGTCTCCATCTGAGCAATAGAA  1099

seq1  ATATGATTATATTCGT-CTCATG-AAGTCTTAATTAATCTTATAAAAGTA  1144
      |||||| ||||||||| |||||| |||||||| |||   ||||||||   
seq2  ATATGA-TATATTCGTCCTCATGAAAGTCTTATTTATCTTTATAAAAAGT  1148

seq1  TGAC-TCATTATGTAGTCAGTTACAGATTA  1173
      |||| ||||||||||||||||||| |||||
seq2  TGACTTCATTATGTAGTCAGTTACGGATTA  1178

seq1: chr17_59495543_59495902
seq2: B6Ng01-079D24.g_75_434 (reverse)

seq1  CTCCCCTCCTCTCCTCTTCTCTCTACTCCTACTCTATTTTGCCTTTGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTCCTCTCCTCTTCTCTCTACTCCTACTCTATTTTGCCTTTGCTA  50

seq1  AAGGCAGATTACAGAGTAACTTTTGGCTTCTTATCTCTTCACCCAAATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGATTACAGAGTAACTTTTGGCTTCTTATCTCTTCACCCAAATGA  100

seq1  GCGCCTCTGCCCTGAGACTGCTTGAGCATTTGATCAAAACTGAAAAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCTCTGCCCTGAGACTGCTTGAGCATTTGATCAAAACTGAAAAGACA  150

seq1  CTGGATACCTTGAAATGTCCAACAGGTGAAGCAGCTTATCAACCCCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATACCTTGAAATGTCCAACAGGTGAAGCAGCTTATCAACCCCATTT  200

seq1  CTCAAACCCATAAAGCTCATTAACCCTAAGGTGCCAGTCTATGACCCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACCCATAAAGCTCATTAACCCTAAGGTGCCAGTCTATGACCCTCT  250

seq1  CCTTCTCCTGAGGTCCCTTCTCTGATGTTCAGGAGGACTGCAAGACTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCCTGAGGTCCCTTCTCTGATGTTCAGGAGGACTGCAAGACTTCC  300

seq1  CTGAAGTTCCTGGGTCCTGTAAGAAAACTTTCTTTTGAAAATAACCTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTTCCTGGGTCCTGTAAGAAAACTTTCTTTTGAAAATAACCTTTC  350

seq1  CGTAGTCTGT  360
      ||||||||||
seq2  CGTAGTCTGT  360