BAC Information

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BAC

Clone NameB6Ng01-082N02
Chromosome17 (Build37)
Map Location 76,102,757 - 76,258,925
singlet/doubletdoublet
Overlap genenone
Upstream geneBirc6, Ttc27, LOC100043672, Ltbp1, EG621988, Rasgrp3, 2810405J04Rik, LOC668787
Downstream geneLOC100043885, LOC100043886
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082N02.bB6Ng01-082N02.g
ACCDH897263DH897264
length1,115996
definitionDH897263|Mus musculus domesticus DNA, BAC clone: B6Ng01-082N02, 5' end.DH897264|Mus musculus domesticus DNA, BAC clone: B6Ng01-082N02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,257,817 - 76,258,925)(76,102,757 - 76,103,755)
sequence
gaattcttttgctgtagtcccatgtatacctagtgatgacttgaaatata
ccattattcatttattcatctgaacaacataagaatttgtcaaattgaaa
ggttctggcccttcgctcttggaatttttacttttctcagtgctcagcat
caaggcattcattctatgtgacacatttttcctctttgttttcaaatacc
ttcaaaaggaactctacacacaacagccatgagttctctcccttttcagt
cacgtgtcaaatcatctcagtcaggcatccactcagaggagccatctaaa
aaggctcctggaaaggtcaacactcgccagctaattggctaagtggcctt
tccttcagtctttagctgccttaactatgtcatgctgatactgctgacag
actttccatttaaaaaaatatcttcccctttattcttttagcatgcccca
ttccttttctttctggatgtcttgcactatatcctctttgcaaagagtat
tgttgctaaagactcacactgagtctacctctgttgctctctactttgtc
tcctgaaagaccaggttcctttctctgacttcaatcaccaccaatatgta
aacaatccatggaggtatttatcattttccacccttatcgttagctttca
gctctgtatgaaggacctatacctgaataaaggtaatgaaaatcgcttcc
caaagcctactttttctgctttatttttttcaaaataaatctaattataa
tatttgtagactaggtaagtggcatttaatacataatacataatttaata
ataattttaatacataagtcactgttcacaagctaatacagaaatctcag
aaagttttcacaccaacaaaaaaaatgtatcctgttcatctcaatttcat
ggcagggccttaaggaaagtatggcctttagtagtttactaaggactaaa
aaaaaagatgaaaatatgctaccctattacagtcccgagtatttacctta
tatccaggagaatggtaaacgtatgccaaagtgttttattttgaaatagc
caaatctaaagctttcccccactctaactggggggagaaaaaataagaag
gaaatcatggtaacc
gaattcctgtggttcgtagttcatcatgaatcagcagtgtcttgattcat
actttaactctgatttcgtgttcctatgtttctgaggctatctgtctgta
gacttggcatttttgcttaagccttcaaattttgagttcagctaattttc
acatggttaccttgcttgaacctgaatttcttagatccagttttctggct
ttctaattcccaagtccaccatcatacctggcctgggtgttgaacttatt
tgtaaaaaaggcccagcaatgaccattcactaccccacattctgcagaca
ttattagtgcggtgctttctctatagtttcatctatgtggtgtcagcagg
tgaaacttgtaaaagatcagtggaagtgagctataaaaactctcatggta
ttttatttaaccattcttattgcactaaaatgtccagaaaggtgaaagaa
caacaaggtcccaattctctctctacacagagtacaaagccttgcttgga
agcgagtacagggtgcagtgaggcttctcttaatgccatttctttgtatt
tacagtaagagtggagcacaggctgagccaaggcttgtgcatcaatgccc
gtgtttttgtccccaagtcactgattgtaaatcaaccatgtcaccggggc
actcggcactccaattgtctgctcatagagctgggaacttgatctatctt
gattctgtagcctaatggaagctccgttgattgatgaggtaccgtaaatc
caccagatggcctcatccgcgagtaaagcccaaggttctgcatagctggg
taaagtttctaatgtttgctttgctcttgaaccaaaatttctatagtttg
ctggcaagctgtctaaagaaaacttcagcttttgctcgaggaattccaga
atggagggacaaaagggcaaatgaagcatagtcggatttgtcaatctttt
aagaaagtccattttagcaggactatggtacccgatggaacaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_76257817_76258925
seq2: B6Ng01-082N02.b_45_1159 (reverse)

seq1  GGTTA-CATGGTTTCCTTCTTATTTTTTCT--CCCCAGTTAGTGT-GGGT  46
      ||||| |||| |||||||||||||||||||  |||||||||| || ||| 
seq2  GGTTACCATGATTTCCTTCTTATTTTTTCTCCCCCCAGTTAGAGTGGGGG  50

seq1  AAAGCTTTAGATTTGGCTTATTCAAA--TAAACACTTTTGCATACCTTTA  94
      ||||||||||||||||||  ||||||   ||||||||| |||||| ||||
seq2  AAAGCTTTAGATTTGGCTATTTCAAAATAAAACACTTTGGCATACGTTTA  100

seq1  CCATTCTCTGGGAATTAAGGTTAATACTCTGGACCTGTAATA-GGTAGCA  143
      ||||||||  |||  |||||| ||||||| ||| |||||||| |||||||
seq2  CCATTCTCCTGGATATAAGGTAAATACTCGGGA-CTGTAATAGGGTAGCA  149

seq1  TATATTTCATCTTTTTTTTTTAGTCCTTTAGTAAACTACTAAAAGGCATA  193
      ||| ||||||| |||||||||||||| |||||||||||||||| | ||||
seq2  TAT-TTTCATC-TTTTTTTTTAGTCC-TTAGTAAACTACTAAAGGCCATA  196

seq1  ACTTCCTTAA-GCCCTGCCATTAAAATTGAGATGAACAGGATACATTTTT  242
        |||||||| ||||||||| | |||||||||||||||||||||||||||
seq2  CTTTCCTTAAGGCCCTGCCA-TGAAATTGAGATGAACAGGATACATTTTT  245

seq1  TTTGTTGTTGTGAAAACTTTCTGAGATTTCTGTATTAGCTTGTGAACAGT  292
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGGTGTGAAAACTTTCTGAGATTTCTGTATTAGCTTGTGAACAGT  295

seq1  GACTTATGTATT-AAATTATTATTAAATTATGTATTATGTATTAAATGCC  341
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GACTTATGTATTAAAATTATTATTAAATTATGTATTATGTATTAAATGCC  345

seq1  ACTTACCTAGTCTACAAATATTATAATTAGATTTATTTTGAAAAAAATAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACCTAGTCTACAAATATTATAATTAGATTTATTTTGAAAAAAATAA  395

seq1  AGCAGAAAAAGTAGGCTTTGGGAAGCGATTTTCATTACCTTTATTCAGGT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAAAAGTAGGCTTTGGGAAGCGATTTTCATTACCTTTATTCAGGT  445

seq1  ATAGGTCCTTCATACAGAGCTG-AAGCTAACGATAAGGGTGG-AAATGAT  489
      |||||||||||||||||||||| ||||||||||||||||||| |||||||
seq2  ATAGGTCCTTCATACAGAGCTGAAAGCTAACGATAAGGGTGGAAAATGAT  495

seq1  AAATACCTCCATGGATTGTTTACATATTGGTGGTGATTGAAGTCAGAGAA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCTCCATGGATTGTTTACATATTGGTGGTGATTGAAGTCAGAGAA  545

seq1  AGGAACCTGGTCTTTCAGGAGACAAAGTAGAGAGCAACAGAGGTAGACTC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCTGGTCTTTCAGGAGACAAAGTAGAGAGCAACAGAGGTAGACTC  595

seq1  AGTGTGAGTCTTTAGCAACAATACTCTTTGCAAAGAGGATATAGTGCAAG  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGAGTCTTTAGCAACAATACTCTTTGCAAAGAGGATATAGTGCAAG  645

seq1  ACATCCAGAAAGAAAAGGAATGGGGCATGCTAAAAGAATAAAGGGGAAGA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCAGAAAGAAAAGGAATGGGGCATGCTAAAAGAATAAAGGGGAAGA  695

seq1  TATTTTTTTAAATGGAAAGTCTGTCAGCAGTATCAGCATGACATAGTTAA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTAAATGGAAAGTCTGTCAGCAGTATCAGCATGACATAGTTAA  745

seq1  GGCAGCTAAAGACTGAAGGAAAGGCCACTTAGCCAATTAGCTGGCGAGTG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCTAAAGACTGAAGGAAAGGCCACTTAGCCAATTAGCTGGCGAGTG  795

seq1  TTGACCTTTCCAGGAGCCTTTTTAGATGGCTCCTCTGAGTGGATGCCTGA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTTTCCAGGAGCCTTTTTAGATGGCTCCTCTGAGTGGATGCCTGA  845

seq1  CTGAGATGATTTGACACGTGACTGAAAAGGGAGAGAACTCATGGCTGTTG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATGATTTGACACGTGACTGAAAAGGGAGAGAACTCATGGCTGTTG  895

seq1  TGTGTAGAGTTCCTTTTGAAGGTATTTGAAAACAAAGAGGAAAAATGTGT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGAGTTCCTTTTGAAGGTATTTGAAAACAAAGAGGAAAAATGTGT  945

seq1  CACATAGAATGAATGCCTTGATGCTGAGCACTGAGAAAAGTAAAAATTCC  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGAATGAATGCCTTGATGCTGAGCACTGAGAAAAGTAAAAATTCC  995

seq1  AAGAGCGAAGGGCCAGAACCTTTCAATTTGACAAATTCTTATGTTGTTCA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCGAAGGGCCAGAACCTTTCAATTTGACAAATTCTTATGTTGTTCA  1045

seq1  GATGAATAAATGAATAATGGTATATTTCAAGTCATCACTAGGTATACATG  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATAAATGAATAATGGTATATTTCAAGTCATCACTAGGTATACATG  1095

seq1  GGACTACAGCAAAAGAATTC  1109
      ||||||||||||||||||||
seq2  GGACTACAGCAAAAGAATTC  1115

seq1: chr17_76102757_76103755
seq2: B6Ng01-082N02.g_69_1064

seq1  GAATTCCTGTGGTTCGTAGTTCATCATGAATCAGCAGTGTCTTGATTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTGGTTCGTAGTTCATCATGAATCAGCAGTGTCTTGATTCAT  50

seq1  ACTTTAACTCTGATTTCGTGTTCCTATGTTTCTGAGGCTATCTGTCTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAACTCTGATTTCGTGTTCCTATGTTTCTGAGGCTATCTGTCTGTA  100

seq1  GACTTGGCATTTTTGCTTAAGCCTTCAAATTTTGAGTTCAGCTAATTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGGCATTTTTGCTTAAGCCTTCAAATTTTGAGTTCAGCTAATTTTC  150

seq1  ACATGGTTACCTTGCTTGAACCTGAATTTCTTAGATCCAGTTTTCTGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTTACCTTGCTTGAACCTGAATTTCTTAGATCCAGTTTTCTGGCT  200

seq1  TTCTAATTCCCAAGTCCACCATCATACCTGGCCTGGGTGTTGAACTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATTCCCAAGTCCACCATCATACCTGGCCTGGGTGTTGAACTTATT  250

seq1  TGTAAAAAAGGCCCAGCAATGACCATTCACTACCCCACATTCTGCAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAAAGGCCCAGCAATGACCATTCACTACCCCACATTCTGCAGACA  300

seq1  TTATTAGTGCGGTGCTTTCTCTATAGTTTCATCTATGTGGTGTCAGCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGTGCGGTGCTTTCTCTATAGTTTCATCTATGTGGTGTCAGCAGG  350

seq1  TGAAACTTGTAAAAGATCAGTGGAAGTGAGCTATAAAAACTCTCATGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTTGTAAAAGATCAGTGGAAGTGAGCTATAAAAACTCTCATGGTA  400

seq1  TTTTATTTAACCATTCTTATTGCACTAAAATGTCCAGAAAGGTGAAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTAACCATTCTTATTGCACTAAAATGTCCAGAAAGGTGAAAGAA  450

seq1  CAACAAGGTCCCAATTCTCTCTCTACACAGAGTACAAAGCCTTGCTTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGGTCCCAATTCTCTCTCTACACAGAGTACAAAGCCTTGCTTGGA  500

seq1  AGCGAGTACAGGGTGCAGTGAGGCTTCTCTTAATGCCATTTCTTTGTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAGTACAGGGTGCAGTGAGGCTTCTCTTAATGCCATTTCTTTGTATT  550

seq1  TACAGTAAGAGTGGAGCACAGGCTGAGCCAAGGCTTGTGCATCAATGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTAAGAGTGGAGCACAGGCTGAGCCAAGGCTTGTGCATCAATGCCC  600

seq1  GTGTTTTTGTCCCCAAGTCACTGATTGTAAATCAACCATGTCACCGGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTTGTCCCCAAGTCACTGATTGTAAATCAACCATGTCACCGGGGC  650

seq1  ACTCGGCACTCCAATTGTCTGCTCATAGAGCTGGGAACTTGATCTATCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGGCACTCCAATTGTCTGCTCATAGAGCTGGGAACTTGATCTATCTT  700

seq1  GATTCTGTAGCCTAATGGAAGCTCCGTTGATTGATGAGGTACCGTAAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGTAGCCTAATGGAAGCTCCGTTGATTGATGAGGTACCGTAAATC  750

seq1  CACCAGATGGCCTCATCCGCGAGTAAAGCCCAAGGTTCTGCATAGCTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGATGGCCTCATCCGCGAGTAAAGCCCAAGGTTCTGCATAGCTGGG  800

seq1  TAAAGTTTCTAATTGTTTTGCTTTGCTCTTGAACCAAAATTTCTATAGTT  850
      |||||||||||||   ||||||||||||||||||||||||||||||||||
seq2  TAAAGTTTCTAAT--GTTTGCTTTGCTCTTGAACCAAAATTTCTATAGTT  848

seq1  TGCTGGCAAGCTGTCTAAAGGAAAACTTCAGCTTTTGCTCGAGGAATTCC  900
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGCTGGCAAGCTGTCTAAA-GAAAACTTCAGCTTTTGCTCGAGGAATTCC  897

seq1  AGAATGAGGGGAC-AGAGGGCAAATG-AGCATAGTCGGAATTGTCATTTC  948
      ||||||  ||||| | |||||||||| |||||||||||| |||||| |  
seq2  AGAATGGAGGGACAAAAGGGCAAATGAAGCATAGTCGGATTTGTCAAT--  945

seq1  CTTTTAAGACAGTCCATTTTAGCAGGACTATGGTACCGAATGGAACCAGA  998
      ||||||||| |||||||||||||||||||||||||||  ||||||| |||
seq2  CTTTTAAGAAAGTCCATTTTAGCAGGACTATGGTACCCGATGGAACAAGA  995

seq1  A  999
      |
seq2  A  996