MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-086M21
Chromosome	17 (Build37)
Map Location	65,032,882 - 65,034,050
singlet/doublet	singlet
Overlap gene	Man2a1
Upstream gene	LOC668677, A930002H24Rik, Fert2, LOC669778, Pja2, LOC100043582
Downstream gene	4930583I09Rik, LOC100043871, E130009J12Rik, LOC668655, LOC674701, Vapa, Txndc2, Rab31
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC668677 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668677
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	A930002H24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320004 MGI:2443151
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	Fert2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14158 MGI:105917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC669778 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669778
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Pja2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224938 MGI:2159342
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100043582 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043582
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Man2a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17158 MGI:104669
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930583I09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78057 MGI:1925307
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC100043871 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043871
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein pseudo : _no_value

name	E130009J12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381107 MGI:2685786
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668655 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668655
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC674701 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674701
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Vapa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30960 MGI:1353561
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Txndc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213272 MGI:2389312
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab31 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106572 MGI:1914603
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A930002H24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94402105 GeneID:320004 MGI:2443151
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : RIKEN cDNA A930002H24 gene transcript_id : XM_484656.4

name	Fert2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83921583 GeneID:14158 MGI:105917
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fer (fms/fps related) protein kinase, testis specific 2 transcript_id : NM_001037997.1

name	Fert2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679772 GeneID:14158 MGI:105917
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fer (fms/fps related) protein kinase, testis specific 2 transcript_id : NM_008000.1

name	Pja2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70778928 GeneID:224938 MGI:2159342
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : praja 2, RING-H2 motif containing transcript_id : NM_144859.2

name	Pja2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70794800 GeneID:224938 MGI:2159342
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : praja 2, RING-H2 motif containing transcript_id : NM_001025309.1

name	LOC100043582 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268780 GeneID:100043582
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100043582 transcript_id : XM_001480456.1

name	Man2a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678789 GeneID:17158 MGI:104669
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mannosidase 2, alpha 1 transcript_id : NM_008549.1

name	4930583I09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94402107 GeneID:78057 MGI:1925307
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 4930583I09 gene transcript_id : XM_128729.3

name	E130009J12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113374161 GeneID:381107 MGI:2685786
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E130009J12 gene transcript_id : NM_001008973.2

name	LOC674701 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268782 GeneID:674701
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) transcript_id : XM_001480470.1

name	Vapa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980695 GeneID:30960 MGI:1353561
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vesicle-associated membrane protein, associated protein A transcript_id : NM_013933.2

name	Txndc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23943823 GeneID:213272 MGI:2389312
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin domain containing 2 (spermatozoa) transcript_id : NM_153519.1

name	Rab31 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19526849 GeneID:106572 MGI:1914603
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB31, member RAS oncogene family transcript_id : NM_133685.1

name	A930002H24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94402106 GeneID:320004 MGI:2443151
definition	codon_start : 1 product : hypothetical protein LOC320004 protein_id : XP_484656.4

name	Fert2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83921584 CCDS:CCDS28936.1 GeneID:14158 MGI:105917
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IDA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IMP]; GO:0051301 - cell division [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IMP]; GO:0046777 - protein amino acid autophosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0007165 - signal transduction [Evidence IDA] codon_start : 1 exception : mismatches in translation note : isoform a is encoded by transcript variant 1 product : fer (fms/fps related) protein kinase, testis specific 2 isoform a protein_id : NP_001033086.1

name	Fert2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679773 CCDS:CCDS28937.1 GeneID:14158 MGI:105917
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IDA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IMP]; GO:0051301 - cell division [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IMP]; GO:0046777 - protein amino acid autophosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0007165 - signal transduction [Evidence IDA] codon_start : 1 exception : mismatches in translation note : isoform b is encoded by transcript variant 2 product : fer (fms/fps related) protein kinase, testis specific 2 isoform b protein_id : NP_032026.1

name	Pja2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450079 CCDS:CCDS29028.1 GeneID:224938 MGI:2159342
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; neurodegeneration associated protein 1; praja2; protein carrying the RING-H2 sequence motif product : ring finger protein 131 isoform b protein_id : NP_659108.1

name	Pja2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70794801 CCDS:CCDS29027.1 GeneID:224938 MGI:2159342
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; neurodegeneration associated protein 1; praja2; protein carrying the RING-H2 sequence motif product : ring finger protein 131 isoform a protein_id : NP_001020480.1

name	LOC100043582 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268781 GeneID:100043582
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480506.1

name	Man2a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678790 CCDS:CCDS28938.1 GeneID:17158 MGI:104669
definition	GO_component : GO:0000139 - Golgi membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004559 - alpha-mannosidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]; GO:0015923 - mannosidase activity [Evidence IEA]; GO:0004572 - mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0006013 - mannose metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : mannosidase 2, alpha 1 protein_id : NP_032575.1

name	4930583I09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20900722 GeneID:78057 MGI:1925307
definition	codon_start : 1 product : hypothetical protein LOC78057 protein_id : XP_128729.1

name	E130009J12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113374162 CCDS:CCDS28940.1 GeneID:381107 MGI:2685786
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : hypothetical protein LOC381107 protein_id : NP_001008973.2

name	LOC674701 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268783 GeneID:674701
definition	codon_start : 1 product : similar to protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) protein_id : XP_001480520.1

name	Vapa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94721328 GeneID:30960 MGI:1353561
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005874 - microtubule [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : vesicle-associated membrane protein, associated protein A (33 kDa); synaptobrevin-associated protein of 33kDa product : vesicle-associated membrane protein, associated protein A protein_id : NP_038961.2

name	Txndc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23943824 GeneID:213272 MGI:2389312
definition	GO_component : GO:0009434 - flagellum (sensu Eukaryota) [Evidence IDA] GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA]; GO:0030508 - thiol-disulfide exchange intermediate activity [Evidence IDA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0006467 - protein thiol-disulfide exchange [Evidence IDA]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 note : spermatid-specific thioredoxin 1 product : thioredoxin domain containing 2 (spermatozoa) protein_id : NP_705739.1

name	Rab31 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526850 GeneID:106572 MGI:1914603
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : Rab31-like protein_id : NP_598446.1

name	LOC668677 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668677
definition	number : 2 pseudo : _no_value

name	LOC668677 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668677
definition	number : 1 pseudo : _no_value

name	LOC669778 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669778
definition	number : 1 pseudo : _no_value

name	LOC669778 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669778
definition	number : 2 pseudo : _no_value

name	LOC669778 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669778
definition	number : 3 pseudo : _no_value

name	LOC668655 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668655
definition	number : 1 pseudo : _no_value

name	LOC668655 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668655
definition	number : 2 pseudo : _no_value

name	LOC100043871 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268889 GeneID:100043871
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : hypothetical protein LOC100043871 pseudo : _no_value transcript_id : XR_035029.1

clone name	MSMg01-418J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327A14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-361G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153I24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-136P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125E23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-304B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092E14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-353O07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-157O20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-467E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207I17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-474I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012H17
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-086M21.b
ACC	DH900105
length	1,149
definition	DH900105\|Mus musculus domesticus DNA, BAC clone: B6Ng01-086M21, 5' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcttatataaatttaaataatgcatgcaaatgaagttgatcatgtt ggtgatcatgttattaattgtgactgtgacctaacataatttacttcagt gacatcagtaacctgctgtgcatggttaattcccaaggcttggtgagttg gaattcatagattttgtatagcagcaaatacataagaattaccatgtagg aaccttgaataaattgtcccaagggatgtttgatttcagaaagatttttt tctttctgtttctcctatactctattttctaagaaactgactgtagtgtc tccaaggacattagtgcagggtgtgcgggtaagtcaggtgacttgaagac tgaatttcatctattcaggaaaaacaagagttaacctcatcatcatgcag gccagaaggccatgcactgttgcatgaccatttataaaggcagcttttat ataaggtggattttctgaaacagcactaagaatcaaagtcatgtaataat aacttcataaacccaagaatggaaaaatttcacgtaaatgcttcgtttta cttcatttgtgatgttgcaacagaaaactgaattttaatgaccataaatc taaatggttcatgctctggaggtttgaaagtccaaggcagatttgctgcg tcttaggatggacttgtgctgaatcatcctgtcatgttgagtcagtcatc ccatactgccgagtcattcatcccatactgctgagtcagtcatcccatac tgccgagtcagtcatcccatactgctgagtcattcatcccatactgctga gtcagtcatcccaaactgctgagtcagtcatcccatggtagattagcaag tgattgaggtggcaaatgcaacattttaccagaaactgctttccaatagt gaacctctgatactaggcagtccgctcatgatggcaaagccctgattgcc caaacagatcttcaagttctcagcattccacaactgtttacttacttata atagaacattcaaaccatggcagaatggtttagctgagataaatttatta aactaccatttacagatttactgaaatggtttactttagtaagctggatg caatatccctatcccatattttcttttctccatcttcctttcacttttt
quality values	Open. Hide. 61 47 22 30 61 50 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 49 47 19 20 16 19 22 12 13 22 18 26 55 37 44 59 59 61 61 59 61 61 61 61 61 61 59 55 55 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 59 59 59 59 59 50 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 47 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 57 50 53 57 53 57 57 57 57 57 53 57 57 57 57 53 57 57 47 52 57 57 57 57 53 46 47 53 52 47 47 57 57 57 53 57 53 57 57 46 40 57 53 53 57 57 57 57 57 57 57 57 42 32 57 46 57 57 57 57 57 57 53 53 52 43 38 47 26 47 53 57 53 43 41 57 57 53 53 57 53 57 53 57 53 57 50 50 25 57 37 41 57 57 53 52 53 46 57 53 57 53 57 50 43 34 43 53 45 53 57 53 53 57 52 53 37 52 57 45 53 53 53 30 50 52 39 52 50 53 44 53 50 57 41 37 50 53 52 36 57 47 38 32 52 31 38 50 40 39 46 37 37 53 42 57 52 37 52 39 53 39 57 44 53 52 43 27 39 40 33 38 34 53 35 52 33 57 53 37 38 40 40 40 53 45 57 36 48 23 29 36 44 30 40 48 37 48 33 57 53 37 41 41 48 36 53 29 48 40 43 12 32 30 30 31 40 38 36 48 30 46 31 36 48 48 47 30 46 38 48 32 44 17 29 29 29 29 29 48 29 48 35 51 47 29 51 32 29 31 46 34 36 29 48 20 29 29 29 29 37 33 30 31 30 51 43 29 33 43 43 24 43 30 25 10 28 43 27 36 30 32 29 29 38 35 29 29 29 20 18 16 18 36 31 29 29 46 26 28 40 28 23 32 29 29 43 51 51 29 29 26 30 25 34 46 51 29 19 21 30 27 29 44 36 20 31 16 20 27 35 27 35 35 24 30 16 30 29 29 27 29 34 20 25 31 34 11 17 17 28 33 34 34 27 28 18 27 35 35 31 31 33 38 27 26 26 20 25 51 38 16 28 51 26 20 29 25 20 20 28 14 35 17 15 35 18 18 15 22 20 21 16 5 23 6 7 7 44 12 6 18 25 31 28 26 31 23 21 23 18 28 9 14 7 15 12 20 30 10 34 22 14 24 11 23 20 20 11 14 7 3 4 6 9 14 5 21 15 10 11 19 25 20 10 42 10 11 19 11 11 19 15 7 10 8 10 30 6 17 18 7 30 24 13 14 14 19 4 9 9 7 7 7 23 15 5 23 4 4 11 11 3 24 10 15 6 6 16 18 15 13 26 13 19 22 6 11 26 7 26 17 10 27 11 11 12 20 9 3 11 13 7 24 18 10 7 17 23 18 14 10 8 16 10 3 1 3 5 9 14 18 19 7 17 18 4 13 4 9 2 3 5 4 4 13 24 9 4 3 5 6 25 13 13 5 4 13 13 4 7 5 9 15 6 10 9 3 4 15 13 13 30 18 8 5 3 4 13 13 24 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr17_65032882_65034050
seq2: B6Ng01-086M21.b_47_1195

seq1  GAATTCTTATATAAATTTAAATAATGCATGCAAATGAAGTTGATCATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATATAAATTTAAATAATGCATGCAAATGAAGTTGATCATGTT  50

seq1  GGTGATCATGTTATTAATTGTGACTGTGACCTAACATAATTTACTTCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATCATGTTATTAATTGTGACTGTGACCTAACATAATTTACTTCAGT  100

seq1  GACATCAGTAACCTGCTGTGCATGGTTAATTCCCAAGGCTTGGTGAGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCAGTAACCTGCTGTGCATGGTTAATTCCCAAGGCTTGGTGAGTTG  150

seq1  GAATTCATAGATTTTGTATAGCAGCAAATACATAAGAATTACCATGTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGATTTTGTATAGCAGCAAATACATAAGAATTACCATGTAGG  200

seq1  AACCTTGAATAAATTGTCCCAAGGGATGTTTGATTTCAGAAAGATTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGAATAAATTGTCCCAAGGGATGTTTGATTTCAGAAAGATTTTTT  250

seq1  TCTTTCTGTTTCTCCTATACTCTATTTTCTAAGAAACTGACTGTAGTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGTTTCTCCTATACTCTATTTTCTAAGAAACTGACTGTAGTGTC  300

seq1  TCCAAGGACATTAGTGCAGGGTGTGCGGGTAAGTCAGGTGACTTGAAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGACATTAGTGCAGGGTGTGCGGGTAAGTCAGGTGACTTGAAGAC  350

seq1  TGAATTTCATCTATTCAGGAAAAACAAGAGTTAACCTCATCATCATGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTCATCTATTCAGGAAAAACAAGAGTTAACCTCATCATCATGCAG  400

seq1  GCCAGAAGGCCATGCACTGTTGCATGACCATTTATAAAGGCAGCTTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAAGGCCATGCACTGTTGCATGACCATTTATAAAGGCAGCTTTTAT  450

seq1  ATAAGGTGGATTTTCTGAAACAGCACTAAGAATCAAAGTCATGTAATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGTGGATTTTCTGAAACAGCACTAAGAATCAAAGTCATGTAATAAT  500

seq1  AACTTCATAAACCCAAGAATGGAAAAATTTCACGTAAATGCTTCGTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCATAAACCCAAGAATGGAAAAATTTCACGTAAATGCTTCGTTTTA  550

seq1  CTTCATTTGTGATGTTGCAACAGAAAACTGAATTTTAATGACCATAAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTGTGATGTTGCAACAGAAAACTGAATTTTAATGACCATAAATC  600

seq1  TAAATGGTTCATGCTCTGGAGGTTTGAAAGTCCAAGGCAGATTTGCTGCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGTTCATGCTCTGGAGGTTTGAAAGTCCAAGGCAGATTTGCTGCG  650

seq1  TCTTAGGATGGACTTGTGCTGAATCATCCTGTCATGTTGAGTCAGTCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGGATGGACTTGTGCTGAATCATCCTGTCATGTTGAGTCAGTCATC  700

seq1  CCATACTGCCGAGTCATTCATCCCATACTGCTGAGTCAGTCATCCCATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACTGCCGAGTCATTCATCCCATACTGCTGAGTCAGTCATCCCATAC  750

seq1  TGCCGAGTCAGTCATCCCATACTGCTGAGTCATTCATCCCATACTGCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGAGTCAGTCATCCCATACTGCTGAGTCATTCATCCCATACTGCTGA  800

seq1  GTCAGTCATCCCAAACTGCTGAGTCAGTCATCCCATGGTAGATTAGCAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTCATCCCAAACTGCTGAGTCAGTCATCCCATGGTAGATTAGCAAG  850

seq1  TGATTGAGGTGGCAAATGCAACATTTTACCAGAAACTGCTTTCCAATAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGAGGTGGCAAATGCAACATTTTACCAGAAACTGCTTTCCAATAGT  900

seq1  GAACCTCTGATACTAGGCAGTCCGCTCATGATGGCAAAGCCCTGATTGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTCTGATACTAGGCAGTCCGCTCATGATGGCAAAGCCCTGATTGCC  950

seq1  CAAACAGATCTTCAGGTTCTCAGCATTCCAC-ACTGTTTACTTACTTAAT  999
      |||||||||||||| |||||||||||||||| ||||||||||||||| ||
seq2  CAAACAGATCTTCAAGTTCTCAGCATTCCACAACTGTTTACTTACTT-AT  999

seq1  ATAAGAACATTCAAACCATGGCAGATGGTTTTAGCTTGAGATAAATTTAT  1049
      |  ||||||||||||||||||||||  | |||||| ||||||||||||| 
seq2  AATAGAACATTCAAACCATGGCAGAATGGTTTAGC-TGAGATAAATTTA-  1047

seq1  TTAAACTACCA-TTACAGATTTACCTGAAAGTGGTTTTACTTTTTAGTAA  1098
      ||||||||||| ||||||||||| |||||| ||| |||||  ||||||||
seq2  TTAAACTACCATTTACAGATTTA-CTGAAA-TGG-TTTAC--TTTAGTAA  1092

seq1  GACATTGATTGGCAAATAATCCTCTTATCCCATATTTTTCTTTTCTCCCA  1148
      |   | |||  ||||   |||  | ||||||||| ||||||||||| |||
seq2  G--CTGGAT--GCAA--TATC--CCTATCCCATA-TTTTCTTTTCT-CCA  1132

seq1  TTCCTTCCCTTTTCACTTTTT  1169
      |  |||||  |||||||||||
seq2  T--CTTCC--TTTCACTTTTT  1149

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information