BAC Information

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BAC

Clone NameB6Ng01-088B07
Chromosome17 (Build37)
Map Location 22,860,812 - 22,861,886
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp760, BC043476, 4930515G13Rik, 2610036F08Rik, LOC624960, 3110048L19Rik, 4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010, EG665844, EG210853, LOC671007, EG240038, EG631624, 6330416L07Rik, Zfp758, 1300003B13Rik, EG210876, LOC100042656, EG628185, ENSMUSG00000046088
Downstream geneEG383218, EG433078, LOC100042679, A630033E08Rik, LOC671128, LOC665961, EG434701, LOC665976, LOC100042225, LOC100042234, EG665988, LOC100042248, Zfp40, LOC100042257, LOC100042261, Vmn2r-ps133, EG666002, EG638102, EG619697, EG619775, EG619788, Olfr752-ps1, EG666030, EG381070, Zfp213, Zfp13, Zscan10, LOC666062, Mmp25, LOC665757, BC038613, Thoc6, Hcfc1r1, Tnfrsf12a, Cldn6, Cldn9, EG666080, 1520401A03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088B07.bB6Ng01-088B07.g
ACCDH901036DH901037
length1,2411,061
definitionDH901036|Mus musculus domesticus DNA, BAC clone: B6Ng01-088B07, 5' end.DH901037|Mus musculus domesticus DNA, BAC clone: B6Ng01-088B07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatgactatgttcatagcagccttatttataa
tagccagaaactggaaagaacccagatgcccctcaacagaggaatggata
cagaaaatgtggtacatctacacaatggagtactactcagctattaaaaa
gaatgaatttatgaaattcctagccaaatggatggacctggagagcatca
tcctgagtgaggtaacacaatcacaaaggaactcacacaatatgtactca
ctgataagtggatactagcccaaaacctaggatacccacgatataagata
caatttcctaaacacatgaaactcaagaaaaatgaagactgaagtgtgga
cactatgcccctccttagaagtgggaacaaaacacccatggaaggagtta
cagaaacaaagtttggagctgagatgaaaggatggaccatgtagagactg
ccatatccagggatccaccccataatcagcatccaaacgctgacaccatt
gcatatactagcaagattttatcgaaaggacccagatgtagctgtctctg
tgagactatgcgggtctagcaaacacagagtgatgctcacagtcagctat
tgatggatcacaggcttccaatgagagctagagaaagtaccagagctaag
ggatctcacccttatagttgacacatatgactacagtaccctgactctga
ccttagctgcatatgattcaaagatgcctatcgccacctggaagagcatt
gacggactttgttgccccggtcaggtaaccccaggctagag
gaattctaaacaagccatttcaccaggaatggagcatttctgcataacat
aacaaaatgctgagtctgtatgagattttgaggaactactgaattaaaaa
aaattttttctgaagaacaaaccaaggttttgaaatccattgaaattata
gcaatgaaaacaagagaattggcttgaagaaaggccacgggtgatatcaa
tgggaaatcattaaaaacagacttaaaacacttctgagattctaagtcct
gagaacatcattttaggaaagggcaaatgtgatcattaaagaatagaacc
tatagaaactacaaaaactctcaaaggtagaagttccagaaaataaacct
agagatacaaattttcctgattttacaagaggctaaacataatgaaaatc
atttgtattgatgtgaagacaaaataaagagatgaaaagaatgggagtgt
cattattatcatgaacagtaataaataatacattttagaagactctagaa
cagctgttcccaacctgtggggtttgatcctcggagcgagttgtgggctg
aatgacgctttcacaaggattttctaagaccattggaaaacacacatttc
cagtggtgttaagaactgaaacatcgctcctctgttcatttccagtatgg
tctgctcacatgcagacatatacacatatacatacctggaactgaaataa
aggttgcaggactaaagtggtacagccttagaaagattgagaatgatggc
tggagaatcatttctagagaaacagaatatggcaaaagcattcttatgtc
tccttcacactttcattattattaagttttttctttggagtttgaatttc
acatgataggaaccagtgtttttcaacatgtttgaagtactctgtatttg
cacatgctgtaattgaggttagcacagctctctggaaattaagtatggat
gtctgtcagctcatgtgggatggaaaatatattcgattttatgtatgaga
tgagatgtagatttagtaagtgaaataaaacagtagtgacttacagaaat
gaatagatgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_22860812_22861886
seq2: B6Ng01-088B07.g_69_1129

seq1  GAATTCTAAACAAGCCATTTCACCAGGAATGGAGCATTTCTGCATAACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAACAAGCCATTTCACCAGGAATGGAGCATTTCTGCATAACAT  50

seq1  AACAAAATGCTGAGTCTGTATGAGATTTTGAGGAACTACTGAATTAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATGCTGAGTCTGTATGAGATTTTGAGGAACTACTGAATTAAAAA  100

seq1  AAATTTTTTCTGAAGAACAAACCAAGGTTTTGAAATCCATTGAAATTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTTTCTGAAGAACAAACCAAGGTTTTGAAATCCATTGAAATTATA  150

seq1  GCAATGAAAACAAGAGAATTGGCTTGAAGAAAGGCCACGGGTGATATCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGAAAACAAGAGAATTGGCTTGAAGAAAGGCCACGGGTGATATCAA  200

seq1  TGGGAAATCATTAAAAACAGACTTAAAACACTTCTGAGATTCTAAGTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAATCATTAAAAACAGACTTAAAACACTTCTGAGATTCTAAGTCCT  250

seq1  GAGAACATCATTTTAGGAAAGGGCAAATGTGATCATTAAAGAATAGAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACATCATTTTAGGAAAGGGCAAATGTGATCATTAAAGAATAGAACC  300

seq1  TATAGAAACTACAAAAACTCTCAAAGGTAGAAGTTCCAGAAAATAAACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAACTACAAAAACTCTCAAAGGTAGAAGTTCCAGAAAATAAACCT  350

seq1  AGAGATACAAATTTTCCTGATTTTACAAGAGGCTAAACATAATGAAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATACAAATTTTCCTGATTTTACAAGAGGCTAAACATAATGAAAATC  400

seq1  ATTTGTATTGATGTGAAGACAAAATAAAGAGATGAAAAGAATGGGAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATTGATGTGAAGACAAAATAAAGAGATGAAAAGAATGGGAGTGT  450

seq1  CATTATTATCATGAACAGTAATAAATAATACATTTTAGAAGACTCTAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTATCATGAACAGTAATAAATAATACATTTTAGAAGACTCTAGAA  500

seq1  CAGCTGTTCCCAACCTGTGGGGTTTGATCCTCGGAGCGAGTTGTGGGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTTCCCAACCTGTGGGGTTTGATCCTCGGAGCGAGTTGTGGGCTG  550

seq1  AATGACGCTTTCACAAGGATTTTCTAAGACCATTGGAAAACACACATTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACGCTTTCACAAGGATTTTCTAAGACCATTGGAAAACACACATTTC  600

seq1  CAGTGGTGTTAAGAACTGAAACATCGCTCCTCTGTTCATTTCCAGTATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTGTTAAGAACTGAAACATCGCTCCTCTGTTCATTTCCAGTATGG  650

seq1  TCTGCTCACATGCAGACATATACACATATACATACCTGGAACTGAAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCACATGCAGACATATACACATATACATACCTGGAACTGAAATAA  700

seq1  AGGTTGCAGGACTAAAGTGGTACAGCCTTAGAAAGATTGAGAATGATGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGCAGGACTAAAGTGGTACAGCCTTAGAAAGATTGAGAATGATGGC  750

seq1  TGGAGAATCATTTCTAGAGAAACAGAATATGGCAAAAGCATTCTTATGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAATCATTTCTAGAGAAACAGAATATGGCAAAAGCATTCTTATGTC  800

seq1  TCCTTCACACTTTCATTATTATTAAGTTTTTTCTTTGGAGTTTGAATTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCACACTTTCATTATTATTAAGTTTTTTCTTTGGAGTTTGAATTTC  850

seq1  ACATGATAGGAACCAGTGTTTTTCAACATGTTTGAAGTACTCTGTATTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATAGGAACCAGTGTTTTTCAACATGTTTGAAGTACTCTGTATTTG  900

seq1  CACATGCTGTAAATTGAGGTTAGCAACAGCTCTCTGGAAATTAAGTTATG  950
      |||||||||| ||||||||||||| |||||||||||||||||||| ||||
seq2  CACATGCTGT-AATTGAGGTTAGC-ACAGCTCTCTGGAAATTAAG-TATG  947

seq1  GATGTCTGTCAGCCTCCATGTGGGATGGAAAAATATATTCGGATTTTATT  1000
      |||||||||||||   |||||||||||| ||||||||||| ||||||| |
seq2  GATGTCTGTCAGC--TCATGTGGGATGG-AAAATATATTC-GATTTTA-T  992

seq1  GTATGAGATGAGAATGTAGATTTAGTAAAGTGAAAATTAAAAACAGTAGT  1050
      |||||||||||| ||||||||||||| ||||||||    |||||||||||
seq2  GTATGAGATGAG-ATGTAGATTTAGT-AAGTGAAA---TAAAACAGTAGT  1037

seq1  GACTTTACAGATATGAATAGATGAC  1075
      ||| ||||||| |||||||||||||
seq2  GAC-TTACAGAAATGAATAGATGAC  1061