BAC Information

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BAC

Clone NameB6Ng01-088L18
Chromosome17 (Build37)4 (Build37)
Map Location 92,914,726 - 92,915,771147,060,083 - 147,060,183
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100043741, LOC100043742, EG640442, LOC627395
Downstream geneLOC676141, LOC668877, LOC100043746, LOC100043747, LOC100043748, LOC100043907, Adcyap1, LOC676157, LOC627503
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088L18.bB6Ng01-088L18.g
ACCDH901508DH901509
length1,117335
definitionDH901508|Mus musculus domesticus DNA, BAC clone: B6Ng01-088L18, 5' end.DH901509|Mus musculus domesticus DNA, BAC clone: B6Ng01-088L18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(92,914,726 - 92,915,771)(147,060,083 - 147,060,183)
sequence
gaattcttgtaacacaatgaaaaacaggacagagatttatgtaaacatct
cattagaagccatgcatgaaagaagagaaaggaaacttacaagagaatgt
actccactgacctagaataaagtacttaataaattctttagatgtgagag
agaagtttctaagtaaacagcattatgaaaattcactaagagatatatcc
attctatgactttctttagttggtagagaagcttggagacttcaaaaggg
acagggtctaaatttaaaagtaaaacagacatagactaagctgtcaataa
gaatctctaggcaaaattttcacagataaaataaaagaaaaatatacaac
aacatcactatatattccattaatcacagtttggtagaaacattactaaa
attgtataaatgtctttatgtataaaacaaaatgattgccaaagataacc
cccaaagacaaaacaggttatggagcttatttgtgcaaatgtataaatga
cagataagggaaggcaacattagcaggctgagaattttgttatttagtat
aatgaaaaaaagaaaaaaaaaagaaaatccttaccttcctgaaagcaaat
taaaagtcagtcataattcattagattttgttagcattttatctaagctc
tgccccacagttacctggcaacaagtgtgcctgaccccctccactctctc
ttgctctagctttcttgattctactcagtcctctctgcccttgcctctct
ctgtctctttctctgtctctgtctctgtctctctctgtctctctctgtgt
ctctcagtctctgtctccgtctctctgtctctgtctctctgtctctctct
gtctctctgtctctgtctctctctctgtctctctgtgtctctgtctctgt
ctctgtctctctctctccctaccttctcaaataacttccctcctcatacc
ctttataaactctatatctatattataccccttctgtggctgtaccttag
aggaagatgcctcagcatgtgccttcagagacacccttctcccgtactgc
atcttctaccaaacatatcccttgcttcttttttttttaataaaaccaac
agtaggagtccatgtgg
ctctttctgtgtctttgaagaactgtgttggggttttgatggatattgtt
aaagtattgtaatttgattttttttttgacagtatcactttctgaggaaa
ctccagattgatttccagagtggttgtaagagtttgcaaccccaccagaa
atctaggagtgttcttctttctccacatcctctccaacacatgttttcac
ctacagttttgatattagccattctgatcggtgtaaggtggaatctgggt
tggttttgttttgttttgttttgttttgttttgttttgttttgttttgtt
ttgttttgttttgttttgttttgttttgtttttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_92914726_92915771
seq2: B6Ng01-088L18.b_125_1162 (reverse)

seq1  CCACATGGGCTCCTACTGTTGTGTTTTATTAAAAAAGATAAGGAAGCCAG  50
      |||||||| |||||||||||| |||||||||||||  | || ||||| ||
seq2  CCACATGGACTCCTACTGTTG-GTTTTATTAAAAA--AAAAAGAAGCAAG  47

seq1  GGATATGTTTGGTAG-AGATGCAGTACGGGGAGAAGGGTGTCTCTGAAGG  99
      ||||||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  GGATATGTTTGGTAGAAGATGCAGTAC-GGGAGAAGGGTGTCTCTGAAGG  96

seq1  CACATGCTGAGGCATCTTTTCCTCCTAAGGTACCAGCCACAGAAGGGGTA  149
      ||||||||||||||||  ||||| |||||||| |||||||||||||||||
seq2  CACATGCTGAGGCATC--TTCCT-CTAAGGTA-CAGCCACAGAAGGGGTA  142

seq1  TAATATAGATATAGAGTTTATTAAGGGTATGAGGAGGGAAGTTATTTGAG  199
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TAATATAGATATAGAGTTTATAAAGGGTATGAGGAGGGAAGTTATTTGAG  192

seq1  AAGGTAGGGGAGAGAGAGAGACAGAGACAGAGACAGAGACACAGAGAGAC  249
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTA-GGGAGAGAGAGAGACAGAGACAGAGACAGAGACACAGAGAGAC  241

seq1  AGAGAGAGAGACAGAGACAGAGAGACAGAGAGAGACAGAGAGACAGAGAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGACAGAGACAGAGAGACAGAGAGAGACAGAGAGACAGAGAC  291

seq1  AGAGAGACGGAGACAGAGACTGAGAGACACAGAGAGAGACAGAGAGAGAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGACGGAGACAGAGACTGAGAGACACAGAGAGAGACAGAGAGAGAC  341

seq1  AGAGACAGAGACAGAGAAAGAGACAGAGAGAGGCAAGGGCAGAGAGGACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGAGACAGAGAAAGAGACAGAGAGAGGCAAGGGCAGAGAGGACT  391

seq1  GAGTAGAATCAAGAAAGCTAGAGCAAGAGAGAGTGGAGGGGGTCAGGCAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGAATCAAGAAAGCTAGAGCAAGAGAGAGTGGAGGGGGTCAGGCAC  441

seq1  ACTTGTTGCCAGGTAACTGTGGGGCAGAGCTTAGATAAAATGCTAACAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTGCCAGGTAACTGTGGGGCAGAGCTTAGATAAAATGCTAACAAA  491

seq1  ATCTAATGAATTATGACTGACTTTTAATTTGCTTTCAGGAAGGTAAGGAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATGAATTATGACTGACTTTTAATTTGCTTTCAGGAAGGTAAGGAT  541

seq1  TTTCTTTTTTTTTTCTTTTTTTCATTATACTAAATAACAAAATTCTCAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTTTTTTCTTTTTTTCATTATACTAAATAACAAAATTCTCAGC  591

seq1  CTGCTAATGTTGCCTTCCCTTATCTGTCATTTATACATTTGCACAAATAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAATGTTGCCTTCCCTTATCTGTCATTTATACATTTGCACAAATAA  641

seq1  GCTCCATAACCTGTTTTGTCTTTGGGGGTTATCTTTGGCAATCATTTTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCATAACCTGTTTTGTCTTTGGGGGTTATCTTTGGCAATCATTTTGT  691

seq1  TTTATACATAAAGACATTTATACAATTTTAGTAATGTTTCTACCAAACTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACATAAAGACATTTATACAATTTTAGTAATGTTTCTACCAAACTG  741

seq1  TGATTAATGGAATATATAGTGATGTTGTTGTATATTTTTCTTTTATTTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAATGGAATATATAGTGATGTTGTTGTATATTTTTCTTTTATTTTA  791

seq1  TCTGTGAAAATTTTGCCTAGAGATTCTTATTGACAGCTTAGTCTATGTCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAAAATTTTGCCTAGAGATTCTTATTGACAGCTTAGTCTATGTCT  841

seq1  GTTTTACTTTTAAATTTAGACCCTGTCCCTTTTGAAGTCTCCAAGCTTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACTTTTAAATTTAGACCCTGTCCCTTTTGAAGTCTCCAAGCTTCT  891

seq1  CTACCAACTAAAGAAAGTCATAGAATGGATATATCTCTTAGTGAATTTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAACTAAAGAAAGTCATAGAATGGATATATCTCTTAGTGAATTTTC  941

seq1  ATAATGCTGTTTACTTAGAAACTTCTCTCTCACATCTAAAGAATTTATTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCTGTTTACTTAGAAACTTCTCTCTCACATCTAAAGAATTTATTA  991

seq1  AGTACTTTATTCTAGGTCAGTGGAGTACATTCTCTTGTAAGTTTCCT  1046
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTTTATTCTAGGTCAGTGGAGTACATTCTCTTGTAAGTTTCCT  1038

seq1: chr4_147060083_147060183
seq2: B6Ng01-088L18.g_162_262 (reverse)

seq1  TGTTGGAGAGGATGCGGAGAAAGAGGAACACTCCTCCATTGCTGGTGGGA  50
      |||||||||||||| ||||||||| ||||||||||  ||| |||||||| 
seq2  TGTTGGAGAGGATGTGGAGAAAGAAGAACACTCCTAGATTTCTGGTGGGG  50

seq1  TTGCAAACCTCTACAACCACTCTGGAAATCAATGTGGAGTTTCCTCAGAA  100
      ||||||||   |||||||||||||||||||||| ||||||||||||||||
seq2  TTGCAAACTCTTACAACCACTCTGGAAATCAATCTGGAGTTTCCTCAGAA  100

seq1  A  101
      |
seq2  A  101