BAC Information

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BAC

Clone NameB6Ng01-090A05
Chromosome17 (Build37)
Map Location 39,984,943 - 39,985,287
singlet/doubletsinglet
Overlap geneLOC672857
Upstream geneLOC100043297, LOC100043300, EG668200, LOC627695
Downstream geneLOC634967, Pgk2, Crisp3, Crisp1, LOC668229, LOC100043756, EG433107, EG619517, Crisp2, Rhag
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090A05.bB6Ng01-090A05.g
ACCDH902430DH902431
length1,038366
definitionDH902430|Mus musculus domesticus DNA, BAC clone: B6Ng01-090A05, 5' end.DH902431|Mus musculus domesticus DNA, BAC clone: B6Ng01-090A05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcttcacaatgataggaagagccgacatcgaaggatcaaaaag
cgacgtcgctatgaacgcttggccgccacaagccagttatccctgtggta
acttttctgacacctcctgcttaaaacccaaaaggtcagaaggatcgtga
ggccccgctttcacggtctgtattcgtactgaaaatcaagatcaagcgag
cttttgcccttctgctccacgggaggtttctgtcctccctgagctcgcct
taggacacctgcgttaccgtttgacaggtgtaccgccccagtcaaactcc
ccacctggcactgtccccggagcgggtcgcgcccgcccgcacgcgcggga
cggacgcttggcgccagaagcgagagcccctcggggctcgcccccccgcc
tcaccgggtcagtgaaaaaacgatgagagtagtggtatttcaccggcggc
ccgcgaggccggcgtgccccgaccccgacgcgaggacggggccgggcgcc
gggggcctcccacttattctacacctctcatgtctcttcaccgtgccaga
ctagagtcaagctcaacagggtcttctttccccgctgattccgccaagcc
cgttcccttggctgtggtttcgctggatagtaggtagggacagtgggaat
ctcgttcatccattcatgcgcgtcactaattagatgacgaggcatttggc
taccttaagagagtcatagttactcccgccgtttacccgcgcttcattga
atttcttcactttgacattcagagcactgggcagaaatcacatcgcgtca
acacccgccgcgggccttcgcgatgctttgttttaattaaacagccggat
tctcctggtccgcaccagttctaagtcggctgctaggcgccggccgaggc
gagcgccgcgcggaaaacggcggcccggggggcggacccggcgggggaac
accgacgcggagtttccctccacacgcgcgggacgcctgccgctcggcac
gcacttcgggagaggcgatggggggtgtggagcgagtc
ccagtaagtgcgggtcataagcttgcgttgattaagtccctgccctttgt
acacaccgcccgtcgctactaccgattggatggtttagtgaggccctcgg
atcggccccgccggggtcggcccacggccctggcggagcgctgagaagac
ggtcgaacttgactatctagaggaagtaaaagtcgtaacaaggtttccgt
aggtgaacctgcggaaggatcattaacgggagactgtggaggagcggcgg
cgtggcccgctctccccgtcttgtgtgtgtcctcgccgggaggcgcgtgc
gtcccgggtcccgtcgcccgcgtgtggagcgaggtgtctggagtgaggtg
agagaaggggtgggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_39984943_39985287
seq2: B6Ng01-090A05.g_68_439

seq1  GAATTCCCAGTAAGTGCGGGCCATAAGCTTGCGTTGATTAAGTCCCTGCC  50
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATTAAGTCCCTGCC  50

seq1  CTTTGTACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGA---  97
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  CTTTGTACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGAGGC  100

seq1  ------------------------GGCCCACGGCCCTGGTGGAGCGCTGA  123
                              ||||||||||||||| ||||||||||
seq2  CCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTGGCGGAGCGCTGA  150

seq1  GAAGACGGTCGAACTTGACTATCTAGAGGAAGTAAAAGTCGTAACAAGGT  173
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACGGTCGAACTTGACTATCTAGAGGAAGTAAAAGTCGTAACAAGGT  200

seq1  TTCCGTAGGTGAACCTGCGGAAGGATCATTAACGGGAGACTGTGGAGGAG  223
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGTAGGTGAACCTGCGGAAGGATCATTAACGGGAGACTGTGGAGGAG  250

seq1  CGGCGGCGTGGCTCGCTCTCCCCGTCTTGTGTGTGTCCTCGCCGGGAGGC  273
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CGGCGGCGTGGCCCGCTCTCCCCGTCTTGTGTGTGTCCTCGCCGGGAGGC  300

seq1  GCGTGCGTCCCGGGTCCCGTCGCCCGCGTGTGGAGCGAGGTGTCTGGAGT  323
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGCGTCCCGGGTCCCGTCGCCCGCGTGTGGAGCGAGGTGTCTGGAGT  350

seq1  GAGGTGAGAGAAGGGGTGGGTG  345
      ||||||||||||||||||||||
seq2  GAGGTGAGAGAAGGGGTGGGTG  372