BAC Information

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BAC

Clone NameB6Ng01-093B15
Chromosome17 (Build37)
Map Location 75,357,363 - 75,358,331
singlet/doubletsinglet
Overlap genenone
Upstream geneSrd5a2, Memo1, EG668716, 2810410M20Rik, LOC668773, LOC668775, Spast, Slc30a6, Nlrc4, LOC100043883, LOC624159, Yipf4, Birc6, Ttc27
Downstream geneLOC100043672, Ltbp1, EG621988, Rasgrp3, 2810405J04Rik, LOC668787, LOC100043885
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093B15.bB6Ng01-093B15.g
ACCDH904680DH904681
length9671,021
definitionDH904680|Mus musculus domesticus DNA, BAC clone: B6Ng01-093B15, 5' end.DH904681|Mus musculus domesticus DNA, BAC clone: B6Ng01-093B15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttccttcgtctgccagtaccctatctagggtgacagacagttct
tcatatcccatcaaggaaagccatgcaacagtctcctcccacagatctga
gatgttgctgggaaaggcaaggcttgtgtccctgtgctctgcctgggata
ctgtggatccagacagagccacttagtccatttttataacagagtaccag
acactgggtagcttaaaacaaacaaaaatgtatccgcttgtagtcctaaa
gtctggaaagtctaaaattgaggagtgggcccttggtgaaggctgtttca
ctgtgtagtctataagaagaggtagaagtaagggaaaagaccagccaaac
ttgccaataagagatccattctcttgaccatggcattgatctgctcactt
cactatgatggcctaactagctctcattagcccctcttcccaacacggtc
gtactggggattaaggtctcatacccatcttggcagggtttggtggggga
ttgtgaggtctaaatgttgatgccaggaaaacaggcagttcacaggagga
caggaggttaaagagaattcaaggagacatagactaaggcaaacattatg
gggcctgacagattgctcagtagctaagcacaccagctgctcttccagag
gacctggactcaatttcctggaacccataataccagctcacaatggtctg
taactccattcccagaggctctgatgtctttagggcctcagtgggcacca
gcaatgtacatggtgcacacacatacatgcaggcaaaacacctatacaca
ttttttgttggtggttgtggttgagtttgtaggggaaacagcccctcaga
gtcatctcaaaacatacctggatatcaagttccagcacaaaggagattga
gaccaggctagtctcaaactcatagcgatccacctgcctctgcttcagag
tggctggattaacataa
gaattctccactaaacccatctggttctgggcttttttggttggaagact
attagtgactgcttttatttatttaggggttatgggactgtttagatggt
ttatttaatcctgttttaactttggcaccttatatatgtctagaaaattg
tccatttcatccagattttccaatttagttgagtataaacttttgtagta
gaatctgatgactttttgaatttccacagtttccattgttatgtctccct
tttcatttctgattttgttaattaggatactgtctctgtgccctctggtt
agtctggcaaagggtttatctatcttgttgattttctcaaagaaccagct
cctggatttgttgattctttgtatagttctttttgtttctatttgttgat
ttcagccctgagtttgattatttcttaccatctactcctcttgggtgtat
tttcttttttgttctagagctttcaggtgtactgtcaagctgctagtgta
agctctctctagtttccttttggggggcacttagagctatgcattttcct
cttaccactgctttcattgtgtcccataagttttgctatgatgtgttttc
atttttattaaattctagaaagtctttaatttctttctttatttcttcct
tgatcaacttatcattgtgtagagcattgttcagtttccatgtgtatgtg
tgttttctgttggtttggtggaatttatgaccagccttagtccgtagtga
tctgatagggtgcatggggataatttcatcttcttatatctgttgaggcc
tgtttatggcccattattatggtcaattttggagaaggtaccatgaggtg
ctgaagaagatatattcttttgttttaggatgaaatgttctatagatatt
ctgttagatccatcggatcatacttgggtaagtttcacgtgtcctgatag
tttcggtttcatgatctggcatgctgaagaggggggtgttaagtctccca
tatggtgggggtgtgatgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_75357363_75358331
seq2: B6Ng01-093B15.b_48_1014 (reverse)

seq1  TTATGTTTAAATCCAG-CACTCATGAAGCAGAGGCAGGTGGATCGCTATG  49
      |||||||  ||||||| ||||| |||||||||||||||||||||||||||
seq2  TTATGTT--AATCCAGCCACTC-TGAAGCAGAGGCAGGTGGATCGCTATG  47

seq1  AGTTTGAGACTAGCCTGGTCTCAATCTCCTTTGTGCTGGGAACTTGATAT  99
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGTTTGAGACTAGCCTGGTCTCAATCTCCTTTGTGCT-GGAACTTGATAT  96

seq1  CTAGGTATGTTTTGAGCTGACTCTGAGGGGCTGATTTCCCTTACAAACTC  149
      | |||||||||||||| |||||||||||||||| |||||| |||||||||
seq2  CCAGGTATGTTTTGAGATGACTCTGAGGGGCTG-TTTCCCCTACAAACTC  145

seq1  AACCACAACCACCAAC-AAAAATGTGTATAGGTGTTTTGCCTGCATGTAT  198
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AACCACAACCACCAACAAAAAATGTGTATAGGTGTTTTGCCTGCATGTAT  195

seq1  GTGTGTGCACCATGTACATTGCTGGTGCCCACTGAGGCCCTAAAGACATC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGCACCATGTACATTGCTGGTGCCCACTGAGGCCCTAAAGACATC  245

seq1  AGAGCCTCTGGGAATGGAGTTACAGACCATTGTGAGCTGGTATTATGGGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTCTGGGAATGGAGTTACAGACCATTGTGAGCTGGTATTATGGGT  295

seq1  TCCAGG-AATTGAGTCCAGGTCCTCTGGAAGAGCAGCTGGTGTGCTTAGC  347
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGAAATTGAGTCCAGGTCCTCTGGAAGAGCAGCTGGTGTGCTTAGC  345

seq1  TACTGAGCAATCTGTCAGGCCCCATAATGTTTGCCTTAGTCTATGTCTCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGCAATCTGTCAGGCCCCATAATGTTTGCCTTAGTCTATGTCTCC  395

seq1  TTGAATTCTCTTTAACCTCCTGTCCTCCTGTGAACTGCCTGTTTTCCTGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTCTCTTTAACCTCCTGTCCTCCTGTGAACTGCCTGTTTTCCTGG  445

seq1  CATCAACATTTAGACCTCACAATCCCCCACCAAACCCTGCCAAGATGGGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAACATTTAGACCTCACAATCCCCCACCAAACCCTGCCAAGATGGGT  495

seq1  ATGAGACCTTAATCCCCAGTACGACCGTGTTGGGAAGAGGGGCTAATGAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGACCTTAATCCCCAGTACGACCGTGTTGGGAAGAGGGGCTAATGAG  545

seq1  AGCTAGTTAGGCCATCATAGTGAAGTGAGCAGATCAATGCCATGGTCAAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGTTAGGCCATCATAGTGAAGTGAGCAGATCAATGCCATGGTCAAG  595

seq1  AGAATGGATCTCTTATTGGCAAGTTTGGCTGGTCTTTTCCCTTACTTCTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGATCTCTTATTGGCAAGTTTGGCTGGTCTTTTCCCTTACTTCTA  645

seq1  CCTCTTCTTATAGACTACACAGTGAAACAGCCTTCACCAAGGGCCCACTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCTTATAGACTACACAGTGAAACAGCCTTCACCAAGGGCCCACTC  695

seq1  CTCAATTTTAGACTTTCCAGACTTTAGGACTACAAGCGGATACATTTTTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATTTTAGACTTTCCAGACTTTAGGACTACAAGCGGATACATTTTTG  745

seq1  TTTGTTTTAAGCTACCCAGTGTCTGGTACTCTGTTATAAAAATGGACTAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTAAGCTACCCAGTGTCTGGTACTCTGTTATAAAAATGGACTAA  795

seq1  GTGGCTCTGTCTGGATCCACAGTATCCCAGGCAGAGCACAGGGACACAAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCTGTCTGGATCCACAGTATCCCAGGCAGAGCACAGGGACACAAG  845

seq1  CCTTGCCTTTCCCAGCAACATCTCAGATCTGTGGGAGGAGACTGTTGCAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCCTTTCCCAGCAACATCTCAGATCTGTGGGAGGAGACTGTTGCAT  895

seq1  GGCTTTCCTTGATGGGATATGAAGAACTGTCTGTCACCCTAGATAGGGTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTCCTTGATGGGATATGAAGAACTGTCTGTCACCCTAGATAGGGTA  945

seq1  CTGGCAGACGAAGGAAGAATTC  969
      ||||||||||||||||||||||
seq2  CTGGCAGACGAAGGAAGAATTC  967