BAC Information

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BAC

Clone NameB6Ng01-093O02
Chromosome17 (Build37)
Map Location 60,442,448 - 60,443,294
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043537, LOC100043542
Downstream geneLOC100043549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093O02.bB6Ng01-093O02.g
ACCDH905245DH905246
length8501,201
definitionDH905245|Mus musculus domesticus DNA, BAC clone: B6Ng01-093O02, 5' end.DH905246|Mus musculus domesticus DNA, BAC clone: B6Ng01-093O02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatagttactaactttgttttagaaattattctcagactagataa
cccatttattttcagtgataggtttatgcaatttgagagagggggacaga
aataatcattagatttaaaacttcatttcagccttcaaaattctgctgac
agatggtagactagcagagtcagttccataatcacagttctgagtcagat
gaaaaattttgaatatgaaatgacagtagaaaatgacattaatttcgctg
actttaagaaccactctcccactgtctgggcaaaacctttggttggtagt
tattaaataagaatgtttagctgtgatttttacacagaaaggctattatt
tcatagcaaaataaggatcaatgaatttgaaagaactattatcgttcaaa
tagcacatcttgggaacatatcaccaagctagaaatatattttctgcatt
tcatttgagtttaggaatttattttacagtaagaagttaaaaaaaaaaag
aatcatttcttggcaaatataaaaatccctgaagatatttcctgtaatct
gaatatattaaaataaacattctggcacctgagttgcttatgtgagagga
atgggaaagatgtcaaactatactatgaattactatcagatttgatcttg
tcatacctatttctgattccaagtggctgccattttcaaataacatttta
tggtatgtttcagaagctgactctagttagatgaaaacaccttttttttt
ttgtatttttaaagcagaatagaaaagcataaagggtctaatctggaagc
agattaggatatatatatatatatatataaaatataaaatatatatatat

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagtaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagactgagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctctgtgagactatgccggggcccagcaaaca
cagaagttggatgctcacagtcagctattggatggatcatagggctccca
atggaggagctagagaaagtagctaaggagctaaagggttttgcacccct
ataggtggaacacattatgagctaaccattaccccgggagcctctggact
ctagctggcatttatatcaaaagaatggctagttcgggccattcactggg
aagagaaggcccatggacttgcaactttatactgctcatgatcagtggta
ttaccaggccatatagggagtgatgtggtgtgctagggtagtagggagtt
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_60442448_60443294
seq2: B6Ng01-093O02.b_49_898

seq1  GAATTCATAGTTACTAACTTTGTTTTAGAAATTATTCTCAGACTAGATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGTTACTAACTTTGTTTTAGAAATTATTCTCAGACTAGATAA  50

seq1  CCCATTTATTTTCAGTGATAGGTTTATGCAATTTGAGAGAGGGGGACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTATTTTCAGTGATAGGTTTATGCAATTTGAGAGAGGGGGACAGA  100

seq1  AATAATCATTAGATTTAAAACTTCATTTCAGCCTTCAAAATTCTGCTGAC  150
      |||||||||||                 ||||||||||||||||||||||
seq2  AATAATCATTANNNNNNNNNNNNNNNNNCAGCCTTCAAAATTCTGCTGAC  150

seq1  AGATGGTAGACTAGCAGAGTCAGTTCCATAATCACAGTTCTGAGTCAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGTAGACTAGCAGAGTCAGTTCCATAATCACAGTTCTGAGTCAGAT  200

seq1  GAAAAATTTTGAATATGAAATGACAGTAGAAAATGACATTAATTTCGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATTTTGAATATGAAATGACAGTAGAAAATGACATTAATTTCGCTG  250

seq1  ACTTTAAGAACCACTCTCCCACTGTCTGGGCAAAACCTTTGGTTGGTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAGAACCACTCTCCCACTGTCTGGGCAAAACCTTTGGTTGGTAGT  300

seq1  TATTAAATAAGAATGTTTAGCTGTGATTTTTACACAGAAAGGCTATTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATAAGAATGTTTAGCTGTGATTTTTACACAGAAAGGCTATTATT  350

seq1  TCATAGCAAAATAAGGATCAATGAATTTGAAAGAACTATTATCGTTCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGCAAAATAAGGATCAATGAATTTGAAAGAACTATTATCGTTCAAA  400

seq1  TAGCACATCTTGGGAACATATCACCAAGCTAGAAATATATTTTCTGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACATCTTGGGAACATATCACCAAGCTAGAAATATATTTTCTGCATT  450

seq1  TCATTTGAGTTTAGGAATTTATTTTACAGTAAGAAGTTAAAAAAAAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGAGTTTAGGAATTTATTTTACAGTAAGAAGTTAAAAAAAAAAAG  500

seq1  AATCATTTCTTGGCAAATATAAAAATCCCTGAAGATATTTCCTGTAATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTTCTTGGCAAATATAAAAATCCCTGAAGATATTTCCTGTAATCT  550

seq1  GAATATATTAAAATAAACATTCTGGCACCTGAGTTGCTTATGTGAGAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATATTAAAATAAACATTCTGGCACCTGAGTTGCTTATGTGAGAGGA  600

seq1  ATGGGAAAGATGTCAAACTATACTATGAATTACTATCAGATTTGATCTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAAGATGTCAAACTATACTATGAATTACTATCAGATTTGATCTTG  650

seq1  TCATACCTATTTCTGATTCCAAGTGGCTGCCATTTTCAAATAACATTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACCTATTTCTGATTCCAAGTGGCTGCCATTTTCAAATAACATTTTA  700

seq1  TGGTATGTTTCAGAAGCTGACTCTAGTTAGATGAAAACACC-TTTTTTTT  749
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGGTATGTTTCAGAAGCTGACTCTAGTTAGATGAAAACACCTTTTTTTTT  750

seq1  TTGTATTTTTAAAGCAGAATAGAAAAGCATAAAGGGTCTAATCTGGAAGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTTTAAAGCAGAATAGAAAAGCATAAAGGGTCTAATCTGGAAGC  800

seq1  AGATTAGGATATATATATATATATATAT-ATATAT-ATATATATATATAT  847
      |||||||||||||||||||||||||||| | |||| | ||||||||||||
seq2  AGATTAGGATATATATATATATATATATAAAATATAAAATATATATATAT  850