BAC Information

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BAC

Clone NameB6Ng01-095I08
Chromosome17 (Build37)
Map Location 62,348,322 - 62,459,125
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC433129, EG620725, LOC100043560
Downstream geneEfna5, Fbxl17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095I08.bB6Ng01-095I08.g
ACCDH906443DH906444
length914450
definitionDH906443|Mus musculus domesticus DNA, BAC clone: B6Ng01-095I08, 5' end.DH906444|Mus musculus domesticus DNA, BAC clone: B6Ng01-095I08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,348,322 - 62,349,235)(62,458,670 - 62,459,125)
sequence
gaattcttagcaatttctctacaatgtttggaaatgggtcctcactcatc
tatgcccctccatcctttgagatagcgtcttcaagcttgaaagaagcata
tgtatcaggtgttttaggtgataatactatcatggaatttagccagcaat
cagactttctttataatcttttttaacttgaatatcccgagaccattttc
cttctaaataaatatttccctttatttatagtacatgctgaccggttata
aattttatatgattttctctgcatggaaatacatttaatccaataatttc
tttaaaagatttattatctttactttaggtgtatgagcatttcgtggagg
tcataaataagagggcatctgatcacctggactagaatcacagagcgtta
ttacctacagtgaggatgctgcagattcagtctaggtcctctggaagaac
agctgagctatctctccgggccctcaaatactaagagtaaacttttattt
gctaaaatgccaccaaagtgtttaccagtgttattgctttttctttgaat
tggttgggtacaacacatttgtctacttataatattttctcttatgtaga
ttccattgtactgttctgatgaaactaagtataatgtgatctgaattaat
cttagttggatgaataacttaaagtcagtgttctggaaattttcatctat
taatttttataattgctgatctgtcatagacattcatttattttcttcta
taacttcaatttctgtgtatgtgaaacattttctcaaatattctatatat
acaatgcttttacttgaattctcatccatacacacaagtataatgcacac
acttgcgctacaaatgcatttgtgtgtgtgcatgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtg
tctacttcacatgtctgccaaagatgttacctttttatttattattagtt
tacaaaagatgcctttcagtagcctttatcctagaagtcatgcttgtttc
tacctatggtctctgtatcttcaaaaggctatctcatcagtgttctgcat
gtaatggatagctcagctttaaaaagtttgttttgttctttttttacttt
gttgagtaaattgttgcaggaatgaacaaatgatcggattagctgtatca
tttttttaaagcaagttaattatgattagtcaaggaaacttctgctcagt
cctaactgtttacctcatactctaaacaattaaagctgtaaattatcacc
acttgaaacttacctttatattttcactagctgttatctgttcacctctg
ttcaagtagtgtatgaagcaagaataatgctgttgtggggggggggggca

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_62348322_62349235
seq2: B6Ng01-095I08.b_43_956

seq1  GAATTCTTAGCAATTTCTCTACAATGTTTGGAAATGGGTCCTCACTCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGCAATTTCTCTACAATGTTTGGAAATGGGTCCTCACTCATC  50

seq1  TATGCCCCTCCATCCTTTGAGATAGCGTCTTCAAGCTTGAAAGAAGCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCCCTCCATCCTTTGAGATAGCGTCTTCAAGCTTGAAAGAAGCATA  100

seq1  TGTATCAGGTGTTTTAGGTGATAATACTATCATGGAATTTAGCCAGCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCAGGTGTTTTAGGTGATAATACTATCATGGAATTTAGCCAGCAAT  150

seq1  CAGACTTTCTTTATAATCTTTTTTAACTTGAATATCCCGAGACCATTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTTTCTTTATAATCTTTTTTAACTTGAATATCCCGAGACCATTTTC  200

seq1  CTTCTAAATAAATATTTCCCTTTATTTATAGTACATGCTGACCGGTTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAAATAAATATTTCCCTTTATTTATAGTACATGCTGACCGGTTATA  250

seq1  AATTTTATATGATTTTCTCTGCATGGAAATACATTTAATCCAATAATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATATGATTTTCTCTGCATGGAAATACATTTAATCCAATAATTTC  300

seq1  TTTAAAAGATTTATTATCTTTACTTTAGGTGTATGAGCATTTCGTGGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGATTTATTATCTTTACTTTAGGTGTATGAGCATTTCGTGGAGG  350

seq1  TCATAAATAAGAGGGCATCTGATCACCTGGACTAGAATCACAGAGCGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAATAAGAGGGCATCTGATCACCTGGACTAGAATCACAGAGCGTTA  400

seq1  TTACCTACAGTGAGGATGCTGCAGATTCAGTCTAGGTCCTCTGGAAGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTACAGTGAGGATGCTGCAGATTCAGTCTAGGTCCTCTGGAAGAAC  450

seq1  AGCTGAGCTATCTCTCCGGGCCCTCAAATACTAAGAGTAAACTTTTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGCTATCTCTCCGGGCCCTCAAATACTAAGAGTAAACTTTTATTT  500

seq1  GCTAAAATGCCACCAAAGTGTTTACCAGTGTTATTGCTTTTTCTTTGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAATGCCACCAAAGTGTTTACCAGTGTTATTGCTTTTTCTTTGAAT  550

seq1  TGGTTGGGTACAACACATTTGTCTACTTATAATATTTTCTCTTATGTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGGTACAACACATTTGTCTACTTATAATATTTTCTCTTATGTAGA  600

seq1  TTCCATTGTACTGTTCTGATGAAACTAAGTATAATGTGATCTGAATTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTGTACTGTTCTGATGAAACTAAGTATAATGTGATCTGAATTAAT  650

seq1  CTTAGTTGGATGAATAACTTAAAGTCAGTGTTCTGGAAATTTTCATCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTGGATGAATAACTTAAAGTCAGTGTTCTGGAAATTTTCATCTAT  700

seq1  TAATTTTTATAATTGCTGATCTGTCATAGACATTCATTTATTTTCTTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTATAATTGCTGATCTGTCATAGACATTCATTTATTTTCTTCTA  750

seq1  TAACTTCAATTTCTGTGTATGTGAAACATTTTCTCAAATATTCTATATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCAATTTCTGTGTATGTGAAACATTTTCTCAAATATTCTATATAT  800

seq1  ACAATGCTTTTACTTGAATTCTCATCCATACACACAAGTATAATGCACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCTTTTACTTGAATTCTCATCCATACACACAAGTATAATGCACAC  850

seq1  ACTTGCGCTACAAATGCATTTGTGTGTGTGCATGTGTGTGTGTGTGTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCGCTACAAATGCATTTGTGTGTGTGCATGTGTGTGTGTGTGTGTG  900

seq1  TGTGTGTGTGTGTG  914
      ||||||||||||||
seq2  TGTGTGTGTGTGTG  914

seq1: chr17_62458670_62459125
seq2: B6Ng01-095I08.g_67_522 (reverse)

seq1  TGCCCCCCCCCCCCACAACAGCATTATTCTTGCTTCATACACTACTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCCCCCCCCCACAACAGCATTATTCTTGCTTCATACACTACTTGAA  50

seq1  CAGAGGTGAACAGATAACAGCTAGTGAAAATATAAAGGTAAGTTTCAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTGAACAGATAACAGCTAGTGAAAATATAAAGGTAAGTTTCAAGT  100

seq1  GGTGATAATTTACAGCTTTAATTGTTTAGAGTATGAGGTAAACAGTTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATAATTTACAGCTTTAATTGTTTAGAGTATGAGGTAAACAGTTAGG  150

seq1  ACTGAGCAGAAGTTTCCTTGACTAATCATAATTAACTTGCTTTAAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCAGAAGTTTCCTTGACTAATCATAATTAACTTGCTTTAAAAAAA  200

seq1  TGATACAGCTAATCCGATCATTTGTTCATTCCTGCAACAATTTACTCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACAGCTAATCCGATCATTTGTTCATTCCTGCAACAATTTACTCAAC  250

seq1  AAAGTAAAAAAAGAACAAAACAAACTTTTTAAAGCTGAGCTATCCATTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAAAAAAAGAACAAAACAAACTTTTTAAAGCTGAGCTATCCATTAC  300

seq1  ATGCAGAACACTGATGAGATAGCCTTTTGAAGATACAGAGACCATAGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAACACTGATGAGATAGCCTTTTGAAGATACAGAGACCATAGGTA  350

seq1  GAAACAAGCATGACTTCTAGGATAAAGGCTACTGAAAGGCATCTTTTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAGCATGACTTCTAGGATAAAGGCTACTGAAAGGCATCTTTTGTA  400

seq1  AACTAATAATAAATAAAAAGGTAACATCTTTGGCAGACATGTGAAGTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATAATAAATAAAAAGGTAACATCTTTGGCAGACATGTGAAGTAGA  450

seq1  GAATTC  456
      ||||||
seq2  GAATTC  456