BAC Information

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BAC

Clone NameB6Ng01-096K20
Chromosome17 (Build37)
Map Location 70,926,372 - 71,060,510
singlet/doubletdoublet
Overlap geneDlgap1
Upstream geneLOC100043630, LOC623112, LOC623143
Downstream geneTgif1, LOC668724, LOC546695, LOC240156, Mylc2b, 2900073G15Rik, Myom1, Lpin2, Emilin2, LOC100043644, Smchd1, LOC100043879, Ndc80, LOC668740, Spdya, LOC623451, Wdr43
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096K20.bB6Ng01-096K20.g
ACCDH907259DH907260
length934679
definitionDH907259|Mus musculus domesticus DNA, BAC clone: B6Ng01-096K20, 5' end.DH907260|Mus musculus domesticus DNA, BAC clone: B6Ng01-096K20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,926,372 - 70,927,303)(71,059,833 - 71,060,510)
sequence
gaattccctgaatctactcatctccctcattctcaccaagcttcaaagtc
ttgggtttattttgtattccattgtgggtcaattctattgtgaattaaat
tgcatttagggacttccatcacatggagacttaactatcaatctcttata
aagtgatttttttcacacaaaattaccttctgaatcaaacccccgacgcc
cccagaaaaccctacaagctttcatttggccagtgtgtctctgtctccat
attaataggcatgttctgtacatatttatttagtctatcctaaattgttt
accctgacagccatatccctgtaagtctcaacactctcattttatatttg
aaagcctgaagttagaagatgttcatttaattcacccgaaaaccacaagt
ctggaaatgagattggtgccatccgacctaattccaaaatctgtacactt
tgctgtagcttattccttcctgtcagtgagcttcatgaggaagaattacg
tcatagcaaggccctcattcctcccctgtccctttgtaggtgttcatacg
acaaacttcatttcacttcacacttactgaggacttactagataccagtc
gttcattgcagagcttcgctgagtagcgtgtgcagacgaaatcacacatc
atttataatcaaatgttttagaattctaagataaattggcactcataatt
gctctccagatcatttgtttcaaattgcagataattgacagaaacttctc
cttcttttttttccccccttcatatttgattttcgtgaaaatgctttcta
cagttctatggttaagtataaaaattttaaaacaagaacaaaggtagagc
aaagaataaaatgacacctgcccattcaccaccttcaaaccttgcacatc
gggagtgggtgggttggtgagcaagggggagtgg
gaattccaaaggttctgatccccagctccactttgaagagaactgtagac
atatcttgtttagcagagagatgtccagtaagacccagtggtaggccaca
aagatgaacagaaccaggggccacacctttggatggacaaggttcagggc
aagttcaatgggcacagtcataaaatgggctgagaagttgatggaaaatg
gacaactcagaacatgtgacaaaattctgatgagtagacccaagagtggt
gaaaaaattgtccctaagggaccaggcctgggctcctcagctgaggaatg
ggaagcctgtgggtttcagaacagccgctggccactgatcactatggtgc
ctcgtctagaatggaagtgtttgttctgatatggacaggcatgccctcca
aaggcacttgcgtggaaagcttagtcctcaaggcaatgcagagggctggg
atgtcaagagtgattgagtcagaaggatatttggctaatcaataagtgtc
tcgagccactgatagattcataattgaatagactgcggggaggtagtgga
tgctatgaaaggaaaggtgggtctgtggtggcgtgtttgtatcatggtgg
cagggtggggcacaatggttgaggattgctcaccttaaagaagctaaaaa
aaaagggtggtggtggaaggagggaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_70926372_70927303
seq2: B6Ng01-096K20.b_45_978

seq1  GAATTCCCTGAATCTACTCATCTCCCTCATTCTCACCAAGCTTCAAAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGAATCTACTCATCTCCCTCATTCTCACCAAGCTTCAAAGTC  50

seq1  TTGGGTTTATTTTGTATTCCATTGTGGGTCAATTCTATTGTGAATTAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTTATTTTGTATTCCATTGTGGGTCAATTCTATTGTGAATTAAAT  100

seq1  TGCATTTAGGGACTTCCATCACATGGAGACTTAACTATCAATCTCTTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTAGGGACTTCCATCACATGGAGACTTAACTATCAATCTCTTATA  150

seq1  AAGTGATTTTTTTCACACAAAATTACCTTCTGAATCAAACCCCCGACGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATTTTTTTCACACAAAATTACCTTCTGAATCAAACCCCCGACGCC  200

seq1  CCCAGAAAACCCTACAAGCTTTCATTTGGCCAGTGTGTCTCTGTCTCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAAAACCCTACAAGCTTTCATTTGGCCAGTGTGTCTCTGTCTCCAT  250

seq1  ATTAATAGGCATGTTCTGTACATATTTATTTAGTCTATCCTAAATTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATAGGCATGTTCTGTACATATTTATTTAGTCTATCCTAAATTGTTT  300

seq1  ACCCTGACAGCCATATCCCTGTAAGTCTCAACACTCTCATTTTATATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGACAGCCATATCCCTGTAAGTCTCAACACTCTCATTTTATATTTG  350

seq1  AAAGCCTGAAGTTAGAAGATGTTCATTTAATTCACCCGAAAACCACAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTGAAGTTAGAAGATGTTCATTTAATTCACCCGAAAACCACAAGT  400

seq1  CTGGAAATGAGATTGGTGCCATCCGACCTAATTCCAAAATCTGTACACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAATGAGATTGGTGCCATCCGACCTAATTCCAAAATCTGTACACTT  450

seq1  TGCTGTAGCTTATTCCTTCCTGTCAGTGAGCTTCATGAGGAAGAATTACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTAGCTTATTCCTTCCTGTCAGTGAGCTTCATGAGGAAGAATTACG  500

seq1  TCATAGCAAGGCCCTCATTCCTCCCCTGTCCCTTTGTAGGTGTTCATACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGCAAGGCCCTCATTCCTCCCCTGTCCCTTTGTAGGTGTTCATACG  550

seq1  ACAAACTTCATTTCACTTCACACTTACTGAGGACTTACTAGATACCAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTTCATTTCACTTCACACTTACTGAGGACTTACTAGATACCAGTC  600

seq1  GTTCATTGCAGAGCTTCGCTGAGTAGCGTGTGCAGACGAAATCACACATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTGCAGAGCTTCGCTGAGTAGCGTGTGCAGACGAAATCACACATC  650

seq1  ATTTATAATCAAATGTTTTAGAATTCTAAGATAAATTGGCACTCATAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAATCAAATGTTTTAGAATTCTAAGATAAATTGGCACTCATAATT  700

seq1  GCTCTCCAGATCATTTGTTTCAAATTGCAGATAATTGACAGAAACTTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCCAGATCATTTGTTTCAAATTGCAGATAATTGACAGAAACTTCTC  750

seq1  CTTCTTTTTTTTCCCCCCTTCATATTTGATTTTCGTGAAAATGC-TTCTA  799
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTTCTTTTTTTTCCCCCCTTCATATTTGATTTTCGTGAAAATGCTTTCTA  800

seq1  CAGTTCTATGGTTAAGTATAAAAATTTTAAAACAAGAACAAAGGTAGAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTATGGTTAAGTATAAAAATTTTAAAACAAGAACAAAGGTAGAGC  850

seq1  AAAGAATAAAATGACACCTGCCCATTCACCACCTTCAAACCTTGCACATC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATAAAATGACACCTGCCCATTCACCACCTTCAAACCTTGCACATC  900

seq1  GGGAGTGGGTGGGTTGGTGAGC-AGGGGGAGTGG  932
      |||||||||||||||||||||| |||||||||||
seq2  GGGAGTGGGTGGGTTGGTGAGCAAGGGGGAGTGG  934

seq1: chr17_71059833_71060510
seq2: B6Ng01-096K20.g_68_746 (reverse)

seq1  TCCTTCCCTCCTTCCACCACCACCCTTTTTTTTTAGCTTCTTTAAGGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCCTCCTTCCACCACCACCCTTTTTTTTTAGCTTCTTTAAGGTGA  50

seq1  GCAATCCTCAACCATTGTGCCCCACCCTGCCACCATGATAC-AACACGCC  99
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCAATCCTCAACCATTGTGCCCCACCCTGCCACCATGATACAAACACGCC  100

seq1  ACCACAGACCCACCTTTCCTTTCATAGCATCCACTACCTCCCCGCAGTCT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGACCCACCTTTCCTTTCATAGCATCCACTACCTCCCCGCAGTCT  150

seq1  ATTCAATTATGAATCTATCAGTGGCTCGAGACACTTATTGATTAGCCAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATTATGAATCTATCAGTGGCTCGAGACACTTATTGATTAGCCAAA  200

seq1  TATCCTTCTGACTCAATCACTCTTGACATCCCAGCCCTCTGCATTGCCTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTTCTGACTCAATCACTCTTGACATCCCAGCCCTCTGCATTGCCTT  250

seq1  GAGGACTAAGCTTTCCACGCAAGTGCCTTTGGAGGGCATGCCTGTCCATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACTAAGCTTTCCACGCAAGTGCCTTTGGAGGGCATGCCTGTCCATA  300

seq1  TCAGAACAAACACTTCCATTCTAGACGAGGCACCATAGTGATCAGTGGCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAACAAACACTTCCATTCTAGACGAGGCACCATAGTGATCAGTGGCC  350

seq1  AGCGGCTGTTCTGAAACCCACAGGCTTCCCATTCCTCAGCTGAGGAGCCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGCTGTTCTGAAACCCACAGGCTTCCCATTCCTCAGCTGAGGAGCCC  400

seq1  AGGCCTGGTCCCTTAGGGACAATTTTTTCACCACTCTTGGGTCTACTCAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGGTCCCTTAGGGACAATTTTTTCACCACTCTTGGGTCTACTCAT  450

seq1  CAGAATTTTGTCACATGTTCTGAGTTGTCCATTTTCCATCAACTTCTCAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTTTGTCACATGTTCTGAGTTGTCCATTTTCCATCAACTTCTCAG  500

seq1  CCCATTTTATGACTGTGCCCATTGAACTTGCCCTGAACCTTGTCCATCCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTTATGACTGTGCCCATTGAACTTGCCCTGAACCTTGTCCATCCA  550

seq1  AAGGTGTGGCCCCTGGTTCTGTTCATCTTTGTGGCCTACCACTGGGTCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGTGGCCCCTGGTTCTGTTCATCTTTGTGGCCTACCACTGGGTCTT  600

seq1  ACTGGACATCTCTCTGCTAAACAAGATATGTCTACAGTTCTCTTCAAAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGACATCTCTCTGCTAAACAAGATATGTCTACAGTTCTCTTCAAAGT  650

seq1  GGAGCTGGGGATCAGAACCTTTGGAATTC  678
      |||||||||||||||||||||||||||||
seq2  GGAGCTGGGGATCAGAACCTTTGGAATTC  679