BAC Information

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BAC

Clone NameB6Ng01-097L21
Chromosome17 (Build37)
Map Location 32,476,370 - 32,572,899
singlet/doubletdoublet
Overlap geneAkap8l, Wiz, A430107D22Rik, Pglyrp2
Upstream geneSlc37a1, Pde9a, Wdr4, 1500032D16Rik, Pknox1, Cbs, LOC623242, U2af1, Cryaa, Snf1lk, Hsf2bp, Rrp1b, LOC435518, Notch3, Pdxk-ps, Abhd9, Brd4, LOC100043434, LOC100043433, Akap8
Downstream gene4732474A20Rik, EG208285, Cyp4f16, LOC667178, LOC677156, EG631304, Cyp4f15, LOC623809, 9030612M13Rik, Zfp811, 6030490I01Rik, LOC631266, BC066107, Cyp4f14, Cyp4f13, 6030422M01Rik, Zfp472, C920016K16Rik, 1700065O13Rik, 4921501E09Rik, Zfp563, Morc2b, LOC100038859, LOC100038860, LOC100043474, Zfp422-rs1, Olfr63, LOC100043468, Zfp81, Zfp101, 1700029I08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097L21.bB6Ng01-097L21.g
ACCDH908028DH908029
length1,1961,147
definitionDH908028|Mus musculus domesticus DNA, BAC clone: B6Ng01-097L21, 5' end.DH908029|Mus musculus domesticus DNA, BAC clone: B6Ng01-097L21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,571,697 - 32,572,899)(32,476,370 - 32,477,531)
sequence
gaattcaaagccagcctgatctacagaacaagttccagggcagccaaggc
tacacagaaaaaccctattttgaaaaacaaacaacaaaacaaaacaaaga
aactctctcttggacattatcttatccagactaggatggcaatgaattca
atgtgtaactgaatctggcctgaacttctgatcctcctgtctccaactct
ccagtgtcaatgtgcctgtctcctgtgtccctcttttgagggagtgacac
caagttagcctgtgggcagtgggggttatttgcccaggccctcccctcca
ggcccatttactccactcaacctgggccctagcactccctcacggactga
gctcacacatctacataaagtcctgcatcttcatttacaaaacttcttcc
cagttccaggatgagatgcctggatgattaaatctctcccatcccttcca
gaaactcagctcaggacacctattgcctattggagactcctggaggcaga
gagtcagcagctccaacagcaaacagcttttatttcctttggtactctgg
actcctctaatccctgtgctggcctaaaccagcttcaacagcttggcagc
tgctctagatgggcttcagtcccggccctgaggcccggaagcccacagga
atctaggggcgctccagatgaggaaataatggagtcctgtgggcccggat
ttgcctcagatgtgggagccctgacatcaggttaatgagatggattacgc
ccattggctagactctgccatagctggggcctctgagacagatgtgtagg
acagagaaccctgagcacaccctcccacgcactcccagggccctgttcct
caatcccagcccacacagtgtttgcatctctgtgggcctgattccacctt
cacagtgtctatgggaggggctctccttccattctcaaggtggacggaat
gagggcaagtcatgaaactacttactagaagtagaggcagaccaggaatt
gttaaatgttttaatgagtttttactgtttagatttcataacatgcatgc
aattgtttttatcaaatctctctcctccatcaccctccaattctgcttat
tctccttctactcactctcctctcaacttccatgtagttttttaccaggg
agttaacctaatgctgctgtatctcatgaatgtagagatcactcta
gaattcccttatgaaatgggggaccagcacacaagactccttcctaccca
aggacatatgaatcgtgaatggtttaaggtgtgatttgaacatgatcttt
cttctgagattagatactcagaagatgtatgtgctcctagaaacagtcct
tcccccgtgctcctgtaagtaagcccaattcaactagagcggattggatt
ttatgttttggtgccatacctagggtatagattagacatttgttcatagt
gctccaggaaaagtcatgcaacatactctttcacccaacgggaacagaga
aacagatggtccagaaaccatgccttaacagagagggctacaaagtcctt
gatgcatcatctaggagtacgatgcattagggaagggcaatcagcaaccc
cccagaatcaagcatggtgatgtacatctgcaattctggaacttcagagg
tggaggcagaaggacctgtacaatcaagacaagtattggctacatagtaa
gtcccagaccaccctgggatacagagtgagaccttactttaaaaacccga
ggggtcagaggcaggcagaactctgtgagttcaaggccattatggttcat
acagaagtttcaggctagaagactgttacagatttttgagactgtctcaa
aaaacagagcaaacaacaaaacacttttttggaaaaaaaaaaaaggtctt
tgaaagaaccacctggatcataaactaaatatactctaggtttgatgata
tgtagtaaaaattgattccttcaggagagtaaagtccaaagtgcaaaaag
cacatgagaatcaagagtcaatgggagtccccagagggacaggcagggca
cctcctagtgtgaccccagtcacttcctagtccatggtatctctgctcta
ttgacagccaaaccacacttatcttttgggcaggaaaccattacagtgag
agacagcagaatgaatgacagagaaacagggaaactaaataaaccgaatg
gtacatcttgcattggactgataaacaaaccaagagatgattgaaacact
taagaattctagaagactgctacatttaatactgtgacttgaaagtccaa
gcaacactccctcctaggatgggaaacctaacatggtctatgcaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_32571697_32572899
seq2: B6Ng01-097L21.b_49_1244 (reverse)

seq1  TAGA-TGATC-CTACATCCATGAGATACAGGCAGCATTTAGTGTTAACTC  48
      |||| ||||| |||||| ||||||||||| |||||| |||| ||||||||
seq2  TAGAGTGATCTCTACATTCATGAGATACA-GCAGCA-TTAG-GTTAACTC  47

seq1  ACTGGGTTAAAAAAAATTTACAT-GAAATTGGGAGG-GAGTTGAGTAGTA  96
       ||||  |||||||    ||||| ||| ||| |||| ||| ||||||| |
seq2  CCTGG--TAAAAAA---CTACATGGAAGTTGAGAGGAGAG-TGAGTAGAA  91

seq1  GGAGATAAGGCAGGAATTGGA-GGTGATGGGAGAGAGAGATTTGATTAAA  145
      |||||  | ||| |||||||| ||||||||  |||||||||||||| |||
seq2  GGAGAATAAGCA-GAATTGGAGGGTGATGGAGGAGAGAGATTTGATAAAA  140

seq1  ACACATTGCATGCATG-TATGAAATTCTTAAACAGTAAAAACTCATTTAA  194
      ||| |||||||||||| ||||||||   ||||||||||||||||| ||||
seq2  ACA-ATTGCATGCATGTTATGAAAT--CTAAACAGTAAAAACTCA-TTAA  186

seq1  AACATTTAACAAATTCCTGGTCTGCCTCTACTTCTAGTAAGTAGTTTCAT  244
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AACATTTAAC-AATTCCTGGTCTGCCTCTACTTCTAGTAAGTAGTTTCAT  235

seq1  GACTTGCCCTCATTCCGTCCACCTTGAGAATGGAAGGAGAGCCCCTCCCA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGCCCTCATTCCGTCCACCTTGAGAATGGAAGGAGAGCCCCTCCCA  285

seq1  TAGACACTGTGAAGGTGGAATCAGG-CCACAGAGATGC-AACACTGTGTG  342
      ||||||||||||||||||||||||| |||||||||||| |||||||||||
seq2  TAGACACTGTGAAGGTGGAATCAGGCCCACAGAGATGCAAACACTGTGTG  335

seq1  GGCTGGGATTGAGGAACAGGGCCCTGGGAGTGCGTGGGAGGGTGTGCTCA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGGATTGAGGAACAGGGCCCTGGGAGTGCGTGGGAGGGTGTGCTCA  385

seq1  GGGTTCTCTGTCCTACACATCTGTCTCAGAGGCCCCAGCTATGGCAGAGT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTCTGTCCTACACATCTGTCTCAGAGGCCCCAGCTATGGCAGAGT  435

seq1  CTAGCCAATGGGCGTAATCCATCTCATTAACCTGATGTCAGGGCTCCCAC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCAATGGGCGTAATCCATCTCATTAACCTGATGTCAGGGCTCCCAC  485

seq1  ATCTGAGGCAAATCCGGGCCCACAGGACTCCATTATTTCCTCATCTGGAG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGGCAAATCCGGGCCCACAGGACTCCATTATTTCCTCATCTGGAG  535

seq1  CGCCCCTAGATTCCTGTGGGCTTCCGGGCCTCAGGGCCGGGACTGAAGCC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCTAGATTCCTGTGGGCTTCCGGGCCTCAGGGCCGGGACTGAAGCC  585

seq1  CATCTAGAGCAGCTGCCAAGCTGTTGAAGCTGGTTTAGGCCAGCACAGGG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAGAGCAGCTGCCAAGCTGTTGAAGCTGGTTTAGGCCAGCACAGGG  635

seq1  ATTAGAGGAGTCCAGAGTACCAAAGGAAATAAAAGCTGTTTGCTGTTGGA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGGAGTCCAGAGTACCAAAGGAAATAAAAGCTGTTTGCTGTTGGA  685

seq1  GCTGCTGACTCTCTGCCTCCAGGAGTCTCCAATAGGCAATAGGTGTCCTG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGACTCTCTGCCTCCAGGAGTCTCCAATAGGCAATAGGTGTCCTG  735

seq1  AGCTGAGTTTCTGGAAGGGATGGGAGAGATTTAATCATCCAGGCATCTCA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGTTTCTGGAAGGGATGGGAGAGATTTAATCATCCAGGCATCTCA  785

seq1  TCCTGGAACTGGGAAGAAGTTTTGTAAATGAAGATGCAGGACTTTATGTA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAACTGGGAAGAAGTTTTGTAAATGAAGATGCAGGACTTTATGTA  835

seq1  GATGTGTGAGCTCAGTCCGTGAGGGAGTGCTAGGGCCCAGGTTGAGTGGA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGTGAGCTCAGTCCGTGAGGGAGTGCTAGGGCCCAGGTTGAGTGGA  885

seq1  GTAAATGGGCCTGGAGGGGAGGGCCTGGGCAAATAACCCCCACTGCCCAC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGGGCCTGGAGGGGAGGGCCTGGGCAAATAACCCCCACTGCCCAC  935

seq1  AGGCTAACTTGGTGTCACTCCCTCAAAAGAGGGACACAGGAGACAGGCAC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAACTTGGTGTCACTCCCTCAAAAGAGGGACACAGGAGACAGGCAC  985

seq1  ATTGACACTGGAGAGTTGGAGACAGGAGGATCAGAAGTTCAGGCCAGATT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACACTGGAGAGTTGGAGACAGGAGGATCAGAAGTTCAGGCCAGATT  1035

seq1  CAGTTACACATTGAATTCATTGCCATCCTAGTCTGGATAAGATAATGTCC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACACATTGAATTCATTGCCATCCTAGTCTGGATAAGATAATGTCC  1085

seq1  AAGAGAGAGTTTCTTTGTTTTGTTTTGTTGTTTGTTTTTCAAAATAGGGT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAGTTTCTTTGTTTTGTTTTGTTGTTTGTTTTTCAAAATAGGGT  1135

seq1  TTTTCTGTGTAGCCTTGGCTGCCCTGGAACTTGTTCTGTAGATCAGGCTG  1192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTGTAGCCTTGGCTGCCCTGGAACTTGTTCTGTAGATCAGGCTG  1185

seq1  GCTTTGAATTC  1203
      |||||||||||
seq2  GCTTTGAATTC  1196

seq1: chr17_32476370_32477531
seq2: B6Ng01-097L21.g_66_1212

seq1  GAATTCCCTTATGAAATGGGGGACCAGCACACAAGACTCCTTCCTACCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTATGAAATGGGGGACCAGCACACAAGACTCCTTCCTACCCA  50

seq1  AGGACATATGAATCGTGAATGGTTTAAGGTGTGATTTGAACATGATCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATATGAATCGTGAATGGTTTAAGGTGTGATTTGAACATGATCTTT  100

seq1  CTTCTGAGATTAGATACTCAGAAGATGTATGTGCTCCTAGAAACAGTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGAGATTAGATACTCAGAAGATGTATGTGCTCCTAGAAACAGTCCT  150

seq1  TCCCCCGTGCTCCTGTAAGTAAGCCCAATTCAACTAGAGCGGATTGGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCGTGCTCCTGTAAGTAAGCCCAATTCAACTAGAGCGGATTGGATT  200

seq1  TTATGTTTTGGTGCCATACCTAGGGTATAGATTAGACATTTGTTCATAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTTTGGTGCCATACCTAGGGTATAGATTAGACATTTGTTCATAGT  250

seq1  GCTCCAGGAAAAGTCATGCAACATACTCTTTCACCCAACGGGAACAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGGAAAAGTCATGCAACATACTCTTTCACCCAACGGGAACAGAGA  300

seq1  AACAGATGGTCCAGAAACCATGCCTTAACAGAGAGGGCTACAAAGTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATGGTCCAGAAACCATGCCTTAACAGAGAGGGCTACAAAGTCCTT  350

seq1  GATGCATCATCTAGGAGTACGATGCATTAGGGAAGGGCAATCAGCAACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCATCATCTAGGAGTACGATGCATTAGGGAAGGGCAATCAGCAACCC  400

seq1  CCCAGAATCAAGCATGGTGATGTACATCTGCAATTCTGGAACTTCAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAATCAAGCATGGTGATGTACATCTGCAATTCTGGAACTTCAGAGG  450

seq1  TGGAGGCAGAAGGACCTGTACAATCAAGACAAGTATTGGCTACATAGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCAGAAGGACCTGTACAATCAAGACAAGTATTGGCTACATAGTAA  500

seq1  GTCCCAGACCACCCTGGGATACAGAGTGAGACCTTACTTTAAAAACCCGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGACCACCCTGGGATACAGAGTGAGACCTTACTTTAAAAACCCGA  550

seq1  GGGGTCAGAGGCAGGCAGAACTCTGTGAGTTCAAGGCCATTATGGTTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCAGAGGCAGGCAGAACTCTGTGAGTTCAAGGCCATTATGGTTCAT  600

seq1  ACAGAAGTTTCAGGCTAGAAGACTGTTACAGATTTTTGAGACTGTCTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGTTTCAGGCTAGAAGACTGTTACAGATTTTTGAGACTGTCTCAA  650

seq1  AAAACAGAGCAAACAACAAAACACTTTTTTGGAAAAAAAAAAAAGGTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGAGCAAACAACAAAACACTTTTTTGGAAAAAAAAAAAAGGTCTT  700

seq1  TGAAAGAACCACCTGGATCATAAACTAAATATACTCTAGGTTTGATGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAACCACCTGGATCATAAACTAAATATACTCTAGGTTTGATGATA  750

seq1  TGTAGTAAAAATTGATTCCTTCAGGAGAGTAAAGTCCAAAGTGCAAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTAAAAATTGATTCCTTCAGGAGAGTAAAGTCCAAAGTGCAAAAAG  800

seq1  CACATGAGAATCAAGAGTCAATGGGAGTCCCCAGAGGGACAGGCAGGGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGAGAATCAAGAGTCAATGGGAGTCCCCAGAGGGACAGGCAGGGCA  850

seq1  CCTCCTAGTGTGACCCCAGTCACTTCCTAGTCCATGGTATCTCTGCTCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTAGTGTGACCCCAGTCACTTCCTAGTCCATGGTATCTCTGCTCTA  900

seq1  TTGACAGCCAAACCACACTTATC-TTTGGGCAGGAAACCAACCACAGTGA  949
      ||||||||||||||||||||||| ||||||||||||||| |  |||||||
seq2  TTGACAGCCAAACCACACTTATCTTTTGGGCAGGAAACC-ATTACAGTGA  949

seq1  GAAGACAGCAGAATGAATGACAGAGAAACAGGGAAACTAAATAAACCGAA  999
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-AGACAGCAGAATGAATGACAGAGAAACAGGGAAACTAAATAAACCGAA  998

seq1  TGGGTACCATC-TGCATTTGACTGTATAAAACAAACCAGGGAGATGATGG  1048
      | |||| |||| |||||| ||||| || ||||||||||  |||||||| |
seq2  T-GGTA-CATCTTGCATTGGACTG-AT-AAACAAACCA-AGAGATGATTG  1043

seq1  AAACCACCTAAGAAATTCTAGAAGACTGCTACATTTAATAAACTGTGACA  1098
      ||| ||| |||| ||||||||||||||||||||||||||  |||||||| 
seq2  AAA-CACTTAAG-AATTCTAGAAGACTGCTACATTTAAT--ACTGTGACT  1089

seq1  TGAGAGTTCACAAAGCAA-ACACCCTCTCAGGATGGGAAAAACTAAACCA  1147
      ||| |||   | |||||| || |||||  |||||||| ||| ||||  ||
seq2  TGAAAGT---CCAAGCAACACTCCCTCCTAGGATGGG-AAACCTAA--CA  1133

seq1  TGTGTCTATGCAACA  1162
      || ||||||||||||
seq2  TG-GTCTATGCAACA  1147