BAC Information

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BAC

Clone NameB6Ng01-097N02
Chromosome17 (Build37)
Map Location 55,325,939 - 55,326,476
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc5a7, LOC668529, 1700025K24Rik, Trp53-ps, LOC240117, EG629178, LOC100043833
Downstream geneLOC100043485, LOC677496, St6gal2, LOC383258, Pot1b, Emr4, Zfp119, BC011426, EG433125, BC031441, Ebi3, Ccdc94, Shd, Fsd1, AW049765, Mpnd, Sh3gl1, Chaf1a, Ubxd1, Hdgfrp2, S3-12, 2310076L09Rik, Lrg1, Sema6b, Tnfaip8l1, D17Wsu104e, Dpp9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097N02.bB6Ng01-097N02.g
ACCDH908086DH908087
length382538
definitionDH908086|Mus musculus domesticus DNA, BAC clone: B6Ng01-097N02, 5' end.DH908087|Mus musculus domesticus DNA, BAC clone: B6Ng01-097N02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttttcaggtctgtagttatcccttcaaattgagatctttggttcatctag
gattacctttatgcaaataataggtatgggtttagtttcattattctaag
tgtggatattcagtttctctagtatcactttttgaagatgctgtcttttt
tcactgggtattatttttggcatctgtgacaaatgtcagatggctgtaat
tagaagtcggttttaagtcatttctttcattccattcatctacatgtatg
ttttgattatagagctttgtaatataccttgaaatctggtatgttatttg
tttcagcattgattgttacttctgttcagagatactggtatgtttctttg
tttgtatgtttggtgtgtgtagtggtgtgtgt
gaattctgtagaggtttgtgttcccatgctaattatgctacccaaaaatc
cgtttgccatgtcccacccgtagaactaaaggaagcctgtccacacttag
gtttgcttgtttgtttttttgtttgtttgtttgtttgtttgtttttcgac
agggtttctctgtgtagctctggctgtcctggaactcactttgtagacca
ggctggcctcgaaatcaaaaatctacctgcctctgcctcctgagtgctgg
gattaaaggcatgcaccaccatgcctggccacacttagtttttcactggt
caataaagttactggcagccaacgccctagtcatggagacagaagcatgt
tggtctgcattcagcctgactcagagcaaaacctactggaggtgaaatga
agggagtttgactgtgcttttcccatgccaccaccaggcaggtactgagc
ttcagagaatcctgaggcactgttctggaggtggggaagcagtcagagac
gtgagaaagctgaagctggtatttgttggcttctgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_55325939_55326476
seq2: B6Ng01-097N02.g_70_607

seq1  GAATTCTGTAGAGGTTTGTGTTCCCATGCTAATTATGCTACCCAAAAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAGAGGTTTGTGTTCCCATGCTAATTATGCTACCCAAAAATC  50

seq1  CGTTTGCCATGTCCCACCCGTAGAACTAAAGGAAGCCTGTCCACACTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTGCCATGTCCCACCCGTAGAACTAAAGGAAGCCTGTCCACACTTAG  100

seq1  GTTTGCTTGTTTGTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTCGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTTGTTTGTTTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTCGAC  150

seq1  AGGGTTTCTCTGTGTAGCTCTGGCTGTCCTGGAACTCACTTTGTAGACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTCTCTGTGTAGCTCTGGCTGTCCTGGAACTCACTTTGTAGACCA  200

seq1  GGCTGGCCTCGAAATCAAAAATCTACCTGCCTCTGCCTCCTGAGTGCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCCTCGAAATCAAAAATCTACCTGCCTCTGCCTCCTGAGTGCTGG  250

seq1  GATTAAAGGCATGCACCACCATGCCTGGCCACACTTAGTTTTTCACTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAGGCATGCACCACCATGCCTGGCCACACTTAGTTTTTCACTGGT  300

seq1  CAATAAAGTTACTGGCAGCCAACGCCCTAGTCATGGAGACAGAAGCATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAGTTACTGGCAGCCAACGCCCTAGTCATGGAGACAGAAGCATGT  350

seq1  TGGTCTGCATTCAGCCTGACTCAGAGCAAAACCTACTGGAGGTGAAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTGCATTCAGCCTGACTCAGAGCAAAACCTACTGGAGGTGAAATGA  400

seq1  AGGGAGTTTGACTGTGCTTTTCCCATGCCACCACCAGGCAGGTACTGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTTTGACTGTGCTTTTCCCATGCCACCACCAGGCAGGTACTGAGC  450

seq1  TTCAGAGAATCCTGAGGCACTGTTCTGGAGGTGGGGAAGCAGTCAGAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGAATCCTGAGGCACTGTTCTGGAGGTGGGGAAGCAGTCAGAGAC  500

seq1  GTGAGAAAGCTGAAGCTGGTATTTGTTGGCTTCTGACT  538
      ||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAAAGCTGAAGCTGGTATTTGTTGGCTTCTGACT  538