MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-098J14
Chromosome	17 (Build37)
Map Location	3,337,263 - 3,522,289
singlet/doublet	doublet
Overlap gene	Tiam2, LOC630810, Tfb1m
Upstream gene	LOC383196, LOC100040029, LOC432993, D030013I16Rik, LOC100040128, 1700024P12Rik, LOC435499, LOC224487, Rbm16, LOC665812, LOC621579, LOC624144
Downstream gene	Cldn20, 1700102H20Rik, Nox3, 4930470H14Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC383196 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383196
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 80 Proteins

name	LOC100040029 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040029
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 153 ESTs, 9 Proteins

name	LOC432993 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:432993
definition	note : synaptojanin 2 binding protein pseudogene pseudo : _no_value

name	D030013I16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328734 MGI:3612472
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	LOC100040128 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040128
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs

name	1700024P12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69392 MGI:1916642
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC435499 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435499
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC224487 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:224487
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins pseudo : _no_value

name	Rbm16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106583 MGI:1925212
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 161 ESTs, 9 Proteins

name	LOC665812 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665812
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins pseudo : _no_value

name	LOC621579 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621579
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 9 Proteins pseudo : _no_value

name	LOC624144 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:624144
definition	note : CD2-associated protein pseudogene pseudo : _no_value

name	Tiam2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24001 MGI:1344338
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC630810 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:630810
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 150 ESTs, 3 Proteins pseudo : _no_value

name	Tfb1m (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224481 MGI:2146851
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cldn20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621628 MGI:3646757
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins

name	1700102H20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68230 MGI:1915480
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs

name	Nox3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224480 MGI:2681162
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930470H14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75815 MGI:1923065
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC383196 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268272 GeneID:383196
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 80 Proteins product : hypothetical LOC383196 transcript_id : XM_001474081.1

name	LOC100040029 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268268 GeneID:100040029
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 153 ESTs, 8 Proteins product : similar to U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, transcript variant 1 transcript_id : XM_001474531.1

name	LOC100040029 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268270 GeneID:100040029
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 71 ESTs, 3 Proteins product : similar to U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, transcript variant 2 transcript_id : XM_001474549.1

name	LOC100040128 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268276 GeneID:100040128
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs product : hypothetical protein LOC100040128 transcript_id : XM_001474127.1

name	1700024P12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94401547 GeneID:69392 MGI:1916642
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 1700024P12 gene transcript_id : XM_898137.2

name	Rbm16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268278 GeneID:106583 MGI:1925212
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 161 ESTs, 9 Proteins product : RNA binding motif protein 16, transcript variant 1 transcript_id : XM_619423.4

name	Tiam2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755267 GeneID:24001 MGI:1344338
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-cell lymphoma invasion and metastasis 2 transcript_id : NM_011878.1

name	Tfb1m (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122568 GeneID:224481 MGI:2146851
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcription factor B1, mitochondrial transcript_id : NM_146074.1

name	Cldn20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82981733 GeneID:621628 MGI:3646757
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins product : claudin 20 transcript_id : XM_888581.1

name	1700102H20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268281 GeneID:68230 MGI:1915480
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs product : RIKEN cDNA 1700102H20 gene transcript_id : XM_001474257.1

name	Nox3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130926 GeneID:224480 MGI:2681162
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NADPH oxidase 3 transcript_id : NM_198958.2

name	4930470H14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268283 GeneID:75815 MGI:1923065
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930470H14 gene transcript_id : XM_001474786.1

name	LOC383196 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268273 GeneID:383196
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474131.1

name	LOC100040029 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268271 GeneID:100040029
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001474599.1

name	LOC100040029 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268269 GeneID:100040029
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001474581.1

name	LOC100040128 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268277 GeneID:100040128
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474177.1

name	1700024P12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94401548 GeneID:69392 MGI:1916642
definition	codon_start : 1 product : hypothetical protein LOC69392 protein_id : XP_903230.2

name	Rbm16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268279 GeneID:106583 MGI:1925212
definition	codon_start : 1 exception : unclassified translation discrepancy note : overriding stop codons product : similar to mKIAA1116 protein isoform 1 protein_id : XP_619423.4 transl_except : (pos:3115399..3115401,aa:OTHER) transl_except : (pos:3145085..3145087,aa:OTHER) transl_except : (pos:3145121..3145123,aa:OTHER) transl_except : (pos:3162966..3162968,aa:OTHER) transl_except : (pos:3162969..3162971,aa:OTHER) transl_except : (pos:3162978..3162980,aa:OTHER) transl_except : (pos:3163098..3163100,aa:OTHER) transl_except : (pos:3164156..3164158,aa:OTHER) transl_except : (pos:3164216..3164218,aa:OTHER) transl_except : (pos:3167973..3167975,aa:OTHER) transl_except : (pos:3169331..3169333,aa:OTHER) transl_except : (pos:3171123..3171125,aa:OTHER) transl_except : (pos:3171147..3171149,aa:OTHER) transl_except : (pos:3177094..3177096,aa:OTHER) transl_except : (pos:3177196..3177198,aa:OTHER) transl_except : (pos:3177208..3177210,aa:OTHER) transl_except : (pos:3177678..3177680,aa:OTHER) transl_except : (pos:3178343..3178345,aa:OTHER) transl_except : (pos:3185121..3185123,aa:OTHER) transl_except : (pos:3185762..3185764,aa:OTHER) transl_except : (pos:3185834..3185836,aa:OTHER) transl_except : (pos:3187602..3187604,aa:OTHER) transl_except : (pos:3187614..3187616,aa:OTHER) transl_except : (pos:3187680..3187682,aa:OTHER) transl_except : (pos:3187686..3187688,aa:OTHER) transl_except : (pos:3187719..3187721,aa:OTHER) transl_except : (pos:3187737..3187739,aa:OTHER) transl_except : (pos:3190159..3190161,aa:OTHER) transl_except : (pos:3191824..3191826,aa:OTHER) transl_except : (pos:3191851..3191853,aa:OTHER) transl_except : (pos:3193071..3193073,aa:OTHER) transl_except : (pos:3195781..3195783,aa:OTHER) transl_except : (pos:3195802..3195804,aa:OTHER) transl_except : (pos:3195817..3195819,aa:OTHER) transl_except : (pos:3195955..3195957,aa:OTHER) transl_except : (pos:3196760..3196762,aa:OTHER) transl_except : (pos:3196796..3196798,aa:OTHER) transl_except : (pos:3196943..3196945,aa:OTHER) transl_except : (pos:3197045..3197047,aa:OTHER) transl_except : (pos:3197129..3197131,aa:OTHER) transl_except : (pos:3197168..3197170,aa:OTHER) transl_except : (pos:3197186..3197188,aa:OTHER) transl_except : (pos:3197189..3197191,aa:OTHER) transl_except : (pos:3197369..3197371,aa:OTHER) transl_except : (pos:3197459..3197461,aa:OTHER) transl_except : (pos:3197525..3197527,aa:OTHER) transl_except : (pos:3197558..3197560,aa:OTHER) transl_except : (pos:3197597..3197599,aa:OTHER) transl_except : (pos:3197612..3197614,aa:OTHER) transl_except : (pos:3197624..3197626,aa:OTHER) transl_except : (pos:3198131..3198133,aa:OTHER) transl_except : (pos:3198164..3198166,aa:OTHER) transl_except : (pos:3198182..3198184,aa:OTHER)

name	Tiam2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755268 GeneID:24001 MGI:1344338
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0005096 - GTPase activator activity [Evidence IDA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005057 - receptor signaling protein activity [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : RAS-related C3 botulinum substrate 1, guanine nucleotide exchange factor 1 product : T-cell lymphoma invasion and metastasis 2 protein_id : NP_036008.1

name	Tfb1m (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122569 CCDS:CCDS28363.1 GeneID:224481 MGI:2146851
definition	GO_function : GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]; GO:0008649 - rRNA methyltransferase activity [Evidence IEA] GO_process : GO:0000154 - rRNA modification [Evidence IEA] codon_start : 1 product : transcription factor B1, mitochondrial protein_id : NP_666186.1

name	Cldn20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82981734 GeneID:621628 MGI:3646757
definition	codon_start : 1 product : similar to Claudin-20 protein_id : XP_893674.1

name	1700102H20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268282 GeneID:68230 MGI:1915480
definition	codon_start : 1 product : hypothetical protein LOC68230 protein_id : XP_001474307.1

name	Nox3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39652622 CCDS:CCDS28364.1 GeneID:224480 MGI:2681162
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0050660 - FAD binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0009629 - response to gravity [Evidence IMP]; GO:0001659 - thermoregulation [Evidence IMP] codon_start : 1 note : head-tilt product : NADPH oxidase 1 protein_id : NP_945196.1

name	4930470H14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268284 GeneID:75815 MGI:1923065
definition	codon_start : 1 product : hypothetical protein LOC75815 protein_id : XP_001474836.1

name	LOC435499 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435499
definition	number : 1 pseudo : _no_value

name	LOC435499 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435499
definition	number : 2 pseudo : _no_value

name	LOC435499 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435499
definition	number : 3 pseudo : _no_value

name	LOC224487 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:224487
definition	number : 1 pseudo : _no_value

name	D030013I16Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149268265 GeneID:328734 MGI:3612472
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D030013I16 gene pseudo : _no_value transcript_id : XR_035109.1

name	LOC665812 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268275 GeneID:665812
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : similar to Ribosomal protein L34 pseudo : _no_value transcript_id : XR_031837.1

name	LOC621579 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268274 GeneID:621579
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 9 Proteins product : similar to myosin:SUBUNIT=regulatory light chain pseudo : _no_value transcript_id : XR_031828.1

name	LOC630810 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268280 GeneID:630810
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 150 ESTs, 3 Proteins product : similar to hCG2015272 pseudo : _no_value transcript_id : XR_031899.1

clone name	MSMg01-360F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483O05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-505B05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-260A05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-057F23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-340O07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-103J03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-520D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101K19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-151A12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-511F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450P15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-315F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100B22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-342E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-194E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078B24
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-098J14.b	B6Ng01-098J14.g
ACC	DH908642	DH908643
length	720	1,102
definition	DH908642\|Mus musculus domesticus DNA, BAC clone: B6Ng01-098J14, 5' end.	DH908643\|Mus musculus domesticus DNA, BAC clone: B6Ng01-098J14, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(3,337,263 - 3,337,979)	(3,521,180 - 3,522,289)
sequence	gaattcttcttgtaaaagcccagggaagttggcagtctttgggtgctttt gggagggtattgtggagggtgccaagtggcacatagctactgtatgcttg gaaaatgttaacaaggggctgggctcctctgaatgtgtgtcttggccttt agagatagctgccatgttggaagaagcatcttttaaaaccaaatgtagac cttgggcatcctccaaggggagtgttgtaaatatagccaggctgatactc aggggttttctttgtagaaagaaaagaagggggtgtttaataagaaccgt gaagtgtttgagcagagaccatgatttcaaagaggtgctcttctcctcca ggccatgttcctgtcaatattgtgtttctagtcctggttctctctgtacc tcccccatagtgtggagcccctcctctcaaggccacttgtggggagggat ggtactaggatagagactgctgtattgcacacgataggcaaacactccgg ctgagctacaccggctgtcccctttacagccttttattttgagagagaac ttattagccactctcaaactctctgtagctcaagctggccttgaacttat gatcttttttgccttagcctgccaagcatctcaaattatgattctgtgca gctaggccaggctggttttgattattatttattacttttttttgtttttc tgggttttgtttgtttttga	gaattctacattttgaagtagtgaccatcaggctctggtctagtggccac cattatagatagttagaactagctgggatttctgtaaccatccaaaactt agcttcttgtgaacgcagagaaaatcgaggcattgaagggttcatgagaa gcactagagagcccatgctcctgtggaaggcaagtgacagagcgtggggt gagaacatctatttgccagacatgcaagaagccctcgatttgatcgtcaa gactgggaaaagagggctggtgagatggctcagtgggttagagcacccga ctgctcttccaaaggtccagagttcaaatcccagcaaccacatggtggct cacaaccatctgtaacaagatctgaccccctcttctggagtgtctgaaga cagctacaatgtagtttacatataataaataaataaataaatctttaaaa aaaagactggggaaagcttaatcacattgtgccatatgtttgattttaat gattgttctcaataaaggttgatgtaggagtggtgcaccttacgcccttg atagagcccaagatcaagcagccattcaagctggtagaaaaagttgtcca gaatgcgtttcagtttcgaaggaaatattgccaccgagggcttgggtaag aatcctttttgactttatggcgcttaaaaggcatgtatgattctggctct tagtttaggtcctgtggttagcagcatgtcaccaccactgaggaaacacc ctgggttcaccttagatgccatatataggtttggttttgtcttaaataca acctaaaacccacaagtctaaagtttttgctgacttgttgctagaaaggt cttggcttctgtcaggactcattttgtatgagtactgtctcttgttcttt aaggacacacttgagaactagaaagcaaatatattcttcttagcagcata atgtcatcatagactgtcttcccactttcactcagcagggagcccttttg ttctgtcaggcttgctgctcttcacaggccatgggcctcccgaaaaaaaa gtcaagtcatgccccgcaggcaacacacaatttcctatctagagttcaca gt
quality values	Open. Hide. 32 28 12 19 43 27 38 32 39 39 24 24 34 24 28 42 37 27 37 43 39 27 29 35 35 10 11 12 11 10 10 5 7 9 8 22 37 41 39 49 34 34 41 49 49 40 52 52 52 49 52 52 52 59 43 59 49 38 43 43 41 59 35 52 59 59 49 59 38 26 33 33 26 13 19 18 18 26 27 37 36 45 43 52 43 27 39 49 39 52 45 59 39 45 59 45 39 39 36 44 38 52 49 45 43 38 49 38 34 39 43 43 39 39 39 59 44 49 39 52 59 59 52 44 52 52 52 52 59 45 44 52 45 45 59 39 45 49 52 43 39 45 41 59 39 39 45 41 45 39 45 22 52 39 52 49 39 36 38 49 43 36 39 31 36 49 36 39 45 39 59 52 27 59 45 33 45 39 52 49 43 43 43 38 39 36 41 43 36 37 31 36 37 52 52 45 43 43 59 44 49 49 45 59 44 49 39 49 49 45 52 43 43 36 30 31 36 59 49 52 49 39 35 45 38 35 49 39 43 45 45 45 43 52 38 31 49 52 39 36 36 32 52 41 43 41 33 43 43 39 36 29 59 45 45 39 43 45 41 45 43 41 49 52 38 35 28 49 43 43 43 49 49 44 44 27 59 52 45 59 52 59 59 39 59 45 49 45 52 52 52 43 38 30 52 45 36 36 31 31 36 36 52 33 43 59 49 59 45 37 43 19 33 27 13 43 27 41 39 31 39 43 43 43 35 45 52 49 36 36 39 28 52 33 45 45 52 36 49 59 59 59 52 45 49 52 52 49 39 23 22 27 19 36 27 39 43 36 27 43 41 39 52 43 52 45 59 52 49 59 49 52 37 52 39 41 39 43 43 43 39 39 39 37 28 41 37 30 52 52 59 59 59 59 49 52 45 43 52 59 36 36 37 36 36 43 38 38 33 27 24 36 22 35 36 52 39 41 49 45 49 36 36 41 35 37 36 52 24 43 36 49 27 43 45 59 59 52 59 43 52 43 43 43 52 36 49 49 41 36 41 34 27 43 37 35 43 27 37 38 32 36 18 36 36 59 49 27 35 18 15 20 15 29 15 40 43 25 27 43 36 36 15 52 28 55 41 41 35 35 41 37 36 13 23 11 22 27 30 43 23 36 36 41 13 29 38 36 36 32 32 35 31 43 23 37 37 17 19 22 22 27 32 28 16 24 28 28 22 19 23 30 37 36 52 43 37 37 36 26 37 37 27 37 21 39 18 41 37 26 32 24 21 28 36 52 24 37 43 35 24 49 49 38 34 24 38 38 31 38 38 31 34 25 34 12 22 18 28 37 34 19 14 17 15 14 24 25 22 32 37 32 35 49 37 30 41 43 34 43 32 43 31 33 20 19 26 28 31 31 37 29 31 37 35 23 12 25 21 26 27 14 26 18 31 24 27 21 49 20 26 21 19 11 21 27 21 14 21 14 27 18 31 27 31 35 35 31 32 25 18 25 25 19 18 21 9 12 20 21 24 24 35 24 26 14 11 14 13 29 43 27 31 30 9 8 22 18 18 7 10 15 18 35 35 18 23 27 23 27 27 24 27 34 23 35 29 43 18 39 19 14 19 13 10 10 18 14 15 8 9 16 19 10 17 14 33 24 16 18	Open. Hide. 61 55 55 37 55 50 16 12 19 10 10 16 55 43 30 52 49 41 52 49 52 59 61 61 59 59 59 61 59 59 49 61 52 59 59 59 61 61 59 59 59 59 52 59 61 59 59 59 49 49 39 38 35 28 31 44 27 37 59 49 45 59 59 52 59 59 59 59 59 59 59 59 44 55 61 61 61 59 61 61 59 59 59 61 59 59 59 59 59 59 59 59 59 59 59 59 61 59 59 59 59 41 59 59 61 59 59 59 61 59 59 61 59 59 52 59 52 45 61 52 59 59 61 61 61 61 52 59 59 59 52 52 59 59 61 61 61 59 61 61 59 61 59 59 59 61 61 44 59 59 59 59 59 59 59 59 52 61 59 61 59 59 61 59 59 59 61 59 59 61 61 61 61 61 61 59 61 59 59 61 59 59 59 59 59 61 61 59 59 49 61 52 59 59 59 61 59 61 61 59 61 61 52 59 59 59 49 59 59 61 61 61 61 59 59 59 59 43 39 61 59 59 59 59 52 52 52 49 61 59 52 59 59 59 59 59 52 59 59 59 59 59 52 52 49 45 43 39 45 52 49 61 59 59 61 59 59 61 61 61 61 59 61 59 61 61 59 59 55 61 52 59 59 59 61 59 61 61 59 61 61 61 59 59 61 61 61 59 59 59 59 61 59 61 59 61 59 59 41 59 52 59 61 59 59 61 59 59 59 59 52 52 61 59 61 59 59 61 59 59 61 61 59 59 61 59 49 59 59 59 52 52 59 45 59 59 59 59 59 59 59 52 59 61 61 59 61 61 59 61 59 59 59 59 59 59 59 59 61 61 61 61 52 59 59 59 59 59 49 59 49 43 36 49 59 49 59 59 59 52 55 55 52 52 52 52 61 61 61 55 55 61 52 55 52 55 61 55 52 61 61 52 55 55 55 55 61 55 61 52 61 49 52 41 52 55 55 55 55 52 55 52 55 61 61 61 61 61 61 55 55 55 55 55 55 61 61 61 55 61 61 61 55 55 55 43 50 55 61 61 61 61 61 61 47 61 55 55 61 61 55 55 61 55 50 50 50 50 43 61 50 55 61 50 55 50 55 55 61 49 61 55 61 55 61 61 61 55 47 49 49 55 61 55 55 50 37 43 47 43 53 53 53 53 61 47 53 61 53 61 50 50 61 53 61 61 61 47 32 50 53 61 52 61 61 53 53 61 61 53 61 61 53 39 61 52 45 43 50 52 52 53 39 34 39 50 50 42 50 61 61 53 61 50 61 61 53 61 40 39 61 37 47 61 33 45 39 43 42 27 27 34 42 39 38 42 53 34 33 47 53 52 61 61 45 61 45 61 61 53 61 53 47 52 53 53 50 50 43 53 40 57 53 47 57 43 47 47 53 30 53 47 34 50 52 47 53 27 53 53 45 57 50 53 53 53 50 53 40 53 52 36 16 53 53 52 42 40 47 47 47 47 53 57 53 47 47 53 53 31 57 41 35 45 27 13 46 53 50 47 47 53 34 47 50 45 40 45 52 57 50 31 52 47 36 37 45 45 47 37 53 25 45 39 53 45 20 52 34 53 23 53 45 45 50 43 20 50 37 21 24 38 30 29 30 36 34 10 52 42 52 53 42 53 27 52 50 50 50 30 43 27 25 12 21 18 30 43 39 45 28 45 31 11 37 37 34 37 34 50 31 19 33 34 27 14 23 31 32 37 38 28 28 14 33 52 24 39 23 38 53 33 24 53 19 53 35 38 37 27 16 40 42 28 39 36 40 33 37 37 33 33 53 52 22 53 26 53 46 28 25 8 25 33 35 29 40 33 40 7 20 31 29 19 32 37 45 31 24 44 32 23 20 15 44 35 35 33 20 14 34 23 18 12 19 28 40 33 21 24 40 26 37 30 45 28 46 34 29 30 30 30 32 15 51 46 16 17 23 9 35 31 27 39 21 15 30 32 29 28 48 16 30 23 8 31 31 23 29 29 21 11 30 28 31 23 13 10 24 16 36 11 37 11 27 28 31 22 21 20 19 11 14 20 11 10 21 25 46 29 29 14 9 15 27 14 7 14 21 29 34 33 29 29 19 32 34 28 20 18 20 43 43 29 13 24 18 41 24 7 7 12 14 7 10 8 32 19 25 12 36 17 26 26 12 11 28 15 7 19 20 14 22 8 18 18 29 26 15 29 41 19 35 26 7 9 13 28 29 28 33 38 19 7 22 6 19 19 11 11 21 12 31 31 14 12 8 12 29 14 29 12 14 22 12 29 33 30 19 21 17 9 7 5 14 15 31 12 13 28 14 17 5 13 9 9 20 10 7 15 6 32 12 5 8 19 18 17 19 30 12 6 32 26 25 9 5 10 13 20 16 6 12 10 22 10 11 4 14 6 9 14 31 19 13 10 28 11 13 14 27 14 28 35 6 9 13 8 6 6 6 12 6 17 5 6 5 20 3 7 21 23 12 12 9 26 13 7 4 4 6 4 5 8 6 25 13 8 7 7 8 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr17_3337263_3337979
seq2: B6Ng01-098J14.b_41_760

seq1  GAATTCTTCTTGTAAAAGCCCAGGGAAGTTGGCAGTCTTTGGGTGCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTTGTAAAAGCCCAGGGAAGTTGGCAGTCTTTGGGTGCTTTT  50

seq1  GGGAGGGTATTGTGGAGGGTGCCAAGTGGCACATAGCTACTGTATGCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGTATTGTGGAGGGTGCCAAGTGGCACATAGCTACTGTATGCTTG  100

seq1  GAAAATGTTAACAAGGGGCTGGGCTCCTCTGAATGTGTGTCTTGGCCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGTTAACAAGGGGCTGGGCTCCTCTGAATGTGTGTCTTGGCCTTT  150

seq1  AGAGATAGCTGCCATGTTGGAAGAAGCATCTTTTAAAACCAAATGTAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATAGCTGCCATGTTGGAAGAAGCATCTTTTAAAACCAAATGTAGAC  200

seq1  CTTGGGCATCCTCCAAGGGGAGTGTTGTAAATATAGCCAGGCTGATACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGCATCCTCCAAGGGGAGTGTTGTAAATATAGCCAGGCTGATACTC  250

seq1  AGGGGTTTTCTTTGTAGAAAGAAAAGAAGGGGGTGTTTAATAAGAACCGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTTTTCTTTGTAGAAAGAAAAGAAGGGGGTGTTTAATAAGAACCGT  300

seq1  GAAGTGTTTGAGCAGAGACCATGATTTCAAAGAGGTGCTCTTCTCCTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTTTGAGCAGAGACCATGATTTCAAAGAGGTGCTCTTCTCCTCCA  350

seq1  GGCCATGTTCCTGTCAATATTGTGTTTCTAGTCCTGGTTCTCTCTGTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATGTTCCTGTCAATATTGTGTTTCTAGTCCTGGTTCTCTCTGTACC  400

seq1  TCCCCCATAGTGTGGAGCCCCTCCTCTCAAGGCCACTTGTGGGGAGGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCATAGTGTGGAGCCCCTCCTCTCAAGGCCACTTGTGGGGAGGGAT  450

seq1  GGTACTAGGATAGAGACTGCTGTATTGCACACGATAGGCAAACACACCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGTACTAGGATAGAGACTGCTGTATTGCACACGATAGGCAAACACTCCGG  500

seq1  CTGAGCTACACCGGCTGTCCCCTTTACAGCCTTTTATTTTGAGAGAGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTACACCGGCTGTCCCCTTTACAGCCTTTTATTTTGAGAGAGAAC  550

seq1  TTATTAGCCACTCTCAAACTCTCTGTAGCTCAAGCTGGCCTTGAACTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGCCACTCTCAAACTCTCTGTAGCTCAAGCTGGCCTTGAACTTAT  600

seq1  GATC-TTTTTGCCTTAGCCTGCCAAGCATCTCAAATTATGATTCTGTGCA  649
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTTTTGCCTTAGCCTGCCAAGCATCTCAAATTATGATTCTGTGCA  650

seq1  GCTAGGCCAGGCTGGTTTTGATTATTATTTATTACTTTTTTT--GTTTTC  697
      ||||||||||||||||||||||||||||||||||||||||||   |||||
seq2  GCTAGGCCAGGCTGGTTTTGATTATTATTTATTACTTTTTTTTGTTTTTC  700

seq1  TGGTTTTGTTTTGTTTTTGA  717
      ||| |||  |||||||||||
seq2  TGGGTTTTGTTTGTTTTTGA  720

seq1: chr17_3521180_3522289
seq2: B6Ng01-098J14.g_65_1166 (reverse)

seq1  ACTGTGAAACCTACTAGATAAGAAATTGGTGTGGTTGCTGCGGGGCCATG  50
      ||||||||  || ||||||| |||||| ||||| |  |||||||| ||||
seq2  ACTGTGAA--CT-CTAGATAGGAAATT-GTGTGTTGCCTGCGGGG-CATG  45

seq1  ACTTGGACTTATTTTTCGGGAGGCCCCATGGGCCTGTGAAGAGCAGCAAG  100
      |||| ||||| |||||||||||| ||||| ||||||||||||||||||||
seq2  ACTT-GACTTTTTTTTCGGGAGG-CCCAT-GGCCTGTGAAGAGCAGCAAG  92

seq1  CCTGACAGAACAAAAGGGCTCCCTGCTGAGTGAAGGTGGGAAGACAGTCT  150
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCTGACAGAACAAAAGGGCTCCCTGCTGAGTGAAAGTGGGAAGACAGTCT  142

seq1  ATGATGACATTATGGCTGCTAAGAAG-ATATATTTGCTTTCTAGTTCTCA  199
      ||||||||||||| |||||||||||| |||||||||||||||||||||||
seq2  ATGATGACATTAT-GCTGCTAAGAAGAATATATTTGCTTTCTAGTTCTCA  191

seq1  AGTGTGTCCTTAAAGGAC-AGAGACAGTAACTCATACAAACTGAGTCCTG  248
      ||||||||||||||| || ||||||||| ||||||||||| |||||||||
seq2  AGTGTGTCCTTAAAGAACAAGAGACAGT-ACTCATACAAAATGAGTCCTG  240

seq1  ACAGAAGCCAAGACCTTTCTAGCAACAAGTCAGCAAAAACTTTAGACTTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGCCAAGACCTTTCTAGCAACAAGTCAGCAAAAACTTTAGACTTG  290

seq1  TGGGTTTTAGGTTGTATTTAAGACAAAACCAAACCTATATATGGCATCTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTTAGGTTGTATTTAAGACAAAACCAAACCTATATATGGCATCTA  340

seq1  AGGTGAACCCAGGGTGTTTCCTCAGTGGTGGTGACATGCTGCTAACCACA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAACCCAGGGTGTTTCCTCAGTGGTGGTGACATGCTGCTAACCACA  390

seq1  GGACCTAAACTAAGAGCCAGAATCATACATGCCTTTTAAGCGCCATAAAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTAAACTAAGAGCCAGAATCATACATGCCTTTTAAGCGCCATAAAG  440

seq1  TCAAAAAGGATTCTTACCCAAGCCCTCGGTGGCAATATTTCCTTCGAAAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAGGATTCTTACCCAAGCCCTCGGTGGCAATATTTCCTTCGAAAC  490

seq1  TGAAACGCATTCTGGACAACTTTTTCTACCAGCTTGAATGGCTGCTTGAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACGCATTCTGGACAACTTTTTCTACCAGCTTGAATGGCTGCTTGAT  540

seq1  CTTGGGCTCTATCAAGGGCGTAAGGTGCACCACTCCTACATCAACCTTTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGCTCTATCAAGGGCGTAAGGTGCACCACTCCTACATCAACCTTTA  590

seq1  TTGAGAACAATCATTAAAATCAAACATATGGCACAATGTGATTAAGCTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAACAATCATTAAAATCAAACATATGGCACAATGTGATTAAGCTTT  640

seq1  CCCCAGTCTTTTTTTTAAAGATTTATTTATTTATTTATTATATGTAAACT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTCTTTTTTTTAAAGATTTATTTATTTATTTATTATATGTAAACT  690

seq1  ACATTGTAGCTGTCTTCAGACACTCCAGAAGAGGGGGTCAGATCTTGTTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTAGCTGTCTTCAGACACTCCAGAAGAGGGGGTCAGATCTTGTTA  740

seq1  CAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGACCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGACCT  790

seq1  TTGGAAGAGCAGTCGGGTGCTCTAACCCACTGAGCCATCTCACCAGCCCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGAGCAGTCGGGTGCTCTAACCCACTGAGCCATCTCACCAGCCCT  840

seq1  CTTTTCCCAGTCTTGACGATCAAATCGAGGGCTTCTTGCATGTCTGGCAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCCAGTCTTGACGATCAAATCGAGGGCTTCTTGCATGTCTGGCAA  890

seq1  ATAGATGTTCTCACCCCACGCTCTGTCACTTGCCTTCCACAGGAGCATGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGTTCTCACCCCACGCTCTGTCACTTGCCTTCCACAGGAGCATGG  940

seq1  GCTCTCTAGTGCTTCTCATGAACCCTTCAATGCCTCGATTTTCTCTGCGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTAGTGCTTCTCATGAACCCTTCAATGCCTCGATTTTCTCTGCGT  990

seq1  TCACAAGAAGCTAAGTTTTGGATGGTTACAGAAATCCCAGCTAGTTCTAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGAAGCTAAGTTTTGGATGGTTACAGAAATCCCAGCTAGTTCTAA  1040

seq1  CTATCTATAATGGTGGCCACTAGACCAGAGCCTGATGGTCACTACTTCAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTATAATGGTGGCCACTAGACCAGAGCCTGATGGTCACTACTTCAA  1090

seq1  AATGTAGAATTC  1110
      ||||||||||||
seq2  AATGTAGAATTC  1102

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Alignment Information