BAC Information

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BAC

Clone NameB6Ng01-102K19
Chromosome17 (Build37)
Map Location 77,581,764 - 77,582,911
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043886, EG624348
Downstream geneLOC545234, LOC100043887, LOC668795, LOC383275
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102K19.bB6Ng01-102K19.g
ACCDH911497DH911498
length1,2291,148
definitionDH911497|Mus musculus domesticus DNA, BAC clone: B6Ng01-102K19, 5' end.DH911498|Mus musculus domesticus DNA, BAC clone: B6Ng01-102K19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaagaatcattattttcagatgacatgatagtaaacatagttga
cttcaaaaatgttatcagagaactcctacagtagatgaaaactctcagca
aagagactaagtacaacgtgaacttagaaattaataactcctctatagat
gatatataaacaggctgagaaagaaatcagggatacaacacccttcacat
taacataaagtatgttggtataatctaactaaccatgtgaaaaacttata
agacaagaacttcaaatctctgaagactgaaattgaagaagatatcagaa
aatggaaagatcttccatgctcatggattgttaggattgatatagtaaaa
atgtccatctcaccaaatgcaatgtgcatattcaatgcaatttccatcga
aatttcaacataattcttcatagatcttgacagaacaattttcaatttca
aatggaaaagccaaaaaccaaagatagccaaaacaatcctattaaataaa
agaactggaagtatcacaatccttgagttcaagctctgttatagagcaat
agtaataaaaactgcattgtattggtattggaacagacaggttgataaat
ggaatcaaatggaagaaataaccccgtatgtaggcttagatttctcaaaa
cctactttaattagggttccttaacatttcagcttcccttctgtgaactc
tgtgtctctaagtgggctgtcttgtctggccccaggggggagaggatgtg
cctaatcctgcagtgatttgatatgcctggatgggttggcatcctggtta
tcctccccttctcagaggagaagagggggagaaaagaggggctgactgtg
ggagactgggatgataggaggctgtggtcaggaggcaaagtgaataaata
agtacattaatggaagaaaaatgcagcattcaccttgggtggcataattc
ttaaggcagggcctctgtgcagtatataagtagagaaagtgaagcaaagg
ttaacatttgtaaattagttcatgctctatctctctggaccctgaatgtg
atttactagatgcttaaaaatatttgctgccttaactcaccggaataggg
agctatgccagttaaacaatttggttctcttaagttttcatgtttggggt
tttaccgtagcaacgaatggaactcacaatggaaattccagcaatcgcaa
agggccctttctattatctcctccttaga
gaattctatgaacagtgcctcttaagaaaactatagttttctttagatca
atatataattctgtgtgatattctcactgtttctgtcaatgtccattcat
aatgtctgggatttttcagccatgtaaaatctgacaggatataatttttt
cctctgtctgggattgataagaaacacatcttccagataaccatattttg
ttctagtcttactttggcacatgctcaatattttttttgaattattctgc
ttacactcttacttctaataactatagatttacctgagattgtaaacaga
aaatgtcaaaatctagacaggtaatattcatgcttttttttctttatata
tatctgcataatttagattagctgatcttatttgaaagtatgtagggaca
agttatgatttattatcttcaagtgttaccatatagcttatatgccccat
tgtctcatattatacaaaaaaaaaactgaattacataatttattagcttt
tggggggttccttgagcacactaaccaatatatatttaaagtgatgctac
ttaataatatacatcctaaataattttctttcattataaattacaagttc
agtgtgtcagcattgtctttcctgattttctcatctgctttttcgattgc
tatctccaataacagattcactcacctttgagaaatgagtaactagtcat
tatctaccaaaatcttattaataaccctatgtaaatatatcattaaatgc
atggctaaaagtgaagtttgatttataaataggcttcaaagagaattttc
atttcaaagccttattagaaaacaaatgtaacagaaaaatagagaattcc
agttcttgagtgtcattatactcaaaattatccacaaaacccaaacctgt
gattggacatttatcatactccttgtatcctggtgtttggttgaggtatc
atgctagtgtttatcccactcagaaccctttcacttgagatttgtttcag
tgttatacatgctacattccaaaataaatccctacattggccagtcttca
cataagaaatgaagtgttttgaagtactccattgctagaaagactccgtc
acaggaagaaggttttaagtttggagtaggggtggatagaacctgctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_77581764_77582911
seq2: B6Ng01-102K19.g_68_1215

seq1  GAATTCTATGAACAGTGCCTCTTAAGAAAACTATAGTTTTCTTTAGATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGAACAGTGCCTCTTAAGAAAACTATAGTTTTCTTTAGATCA  50

seq1  ATATATAATTCTGTGTGATATTCTCACTGTTTCTGTCAATGTCCATTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAATTCTGTGTGATATTCTCACTGTTTCTGTCAATGTCCATTCAT  100

seq1  AATGTCTGGGATTTTTCAGCCATGTAAAATCTGACAGGATATAATTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTGGGATTTTTCAGCCATGTAAAATCTGACAGGATATAATTTTTT  150

seq1  CCTCTGTCTGGGATTGATAAGAAACACATCTTCCAGATAACCATATTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTCTGGGATTGATAAGAAACACATCTTCCAGATAACCATATTTTG  200

seq1  TTCTAGTCTTACTTTGGCACATGCTCAATATTTTTTTTGAATTATTCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTCTTACTTTGGCACATGCTCAATATTTTTTTTGAATTATTCTGC  250

seq1  TTACACTCTTACTTCTAATAACTATAGATTTACCTGAGATTGTAAACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACTCTTACTTCTAATAACTATAGATTTACCTGAGATTGTAAACAGA  300

seq1  AAATGTCAAAATCTAGACAGGTAATATTCATGCTTTTTTTTCTTTATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCAAAATCTAGACAGGTAATATTCATGCTTTTTTTTCTTTATATA  350

seq1  TATCTGCATAATTTAGATTAGCTGATCTTATTTGAAAGTATGTAGGGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGCATAATTTAGATTAGCTGATCTTATTTGAAAGTATGTAGGGACA  400

seq1  AGTTATGATTTATTATCTTCAAGTGTTACCATATAGCTTATATGCCCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGATTTATTATCTTCAAGTGTTACCATATAGCTTATATGCCCCAT  450

seq1  TGTCTCATATTATACAAAAAAAAAACTGAATTACATAATTTATTAGCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCATATTATACAAAAAAAAAACTGAATTACATAATTTATTAGCTTT  500

seq1  TGGGGGGTTCCTTGAGCACACTAACCAATATATATTTAAAGTGATGCTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGGTTCCTTGAGCACACTAACCAATATATATTTAAAGTGATGCTAC  550

seq1  TTAATAATATACATCCTAAATAATTTTCTTTCATTATAAATTACAAGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAATATACATCCTAAATAATTTTCTTTCATTATAAATTACAAGTTC  600

seq1  AGTGTGTCAGCATTGTCTTTCCTGATTTTCTCATCTGCTTTTTCGATTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTCAGCATTGTCTTTCCTGATTTTCTCATCTGCTTTTTCGATTGC  650

seq1  TATCTCCAATAACAGATTCACTCACCTTTGAGAAATGAGTAACTAGTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCCAATAACAGATTCACTCACCTTTGAGAAATGAGTAACTAGTCAT  700

seq1  TATCTACCAAAATCTTATTAATAACCCTATGTAAATATATCATTAAATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTACCAAAATCTTATTAATAACCCTATGTAAATATATCATTAAATGC  750

seq1  ATGGCTAAAAGTGAAGTTTGATTTATAAATAGGCTTCAAAGAGAATTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTAAAAGTGAAGTTTGATTTATAAATAGGCTTCAAAGAGAATTTTC  800

seq1  ATTTCAAAGCCTTATTAGAAAACAAATGTAACAGAAAAATAGAGAATTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAAGCCTTATTAGAAAACAAATGTAACAGAAAAATAGAGAATTCC  850

seq1  AGTTCTTGAGTGTCATTATACTCAAAATTATCCACAAAACCCAAACCTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTGAGTGTCATTATACTCAAAATTATCCACAAAACCCAAACCTGT  900

seq1  GATTGGACATTTATCAATACTCCTTGTATCCTGGTGTTTGGTTTGAGGTA  950
      ||||||||||||||| ||||||||||||||||||||||||| ||||||||
seq2  GATTGGACATTTATC-ATACTCCTTGTATCCTGGTGTTTGG-TTGAGGTA  948

seq1  TCATGCTAGTGTTTATTCCAACTCAGAACCCTTTCACTTGAGATTTGTTT  1000
      ||||||||||||||| ||| ||||||||||||||||||||||||||||||
seq2  TCATGCTAGTGTTTA-TCCCACTCAGAACCCTTTCACTTGAGATTTGTTT  997

seq1  CAGTGTTATACATGCTACATT-CAAAATAAATCACTACATTGCCAAGTTC  1049
      ||||||||||||||||||||| ||||||||||| |||||||| | || ||
seq2  CAGTGTTATACATGCTACATTCCAAAATAAATCCCTACATTGGCCAG-TC  1046

seq1  TTCACATAAGAATTGAAGGTGTTTGAAGTACTCCA-TGCTAGGAAAGGAC  1098
      |||||||||||| |||||   |||||||||||||| ||||||  || |||
seq2  TTCACATAAGAAATGAAGTGTTTTGAAGTACTCCATTGCTAG--AAAGAC  1094

seq1  T-CGTCAACAGAAGAGTGTTTT-AGTTTGGAGTAGGGGTGGAT-GAA-CT  1144
      | |||||   |||||  ||||| |||||||||||||||||||| ||| ||
seq2  TCCGTCACAGGAAGAAGGTTTTAAGTTTGGAGTAGGGGTGGATAGAACCT  1144

seq1  GCTT  1148
      ||||
seq2  GCTT  1148