BAC Information

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BAC

Clone NameB6Ng01-104G21
Chromosome17 (Build37)
Map Location 91,323,376 - 91,520,408
singlet/doubletdoublet
Overlap geneNrxn1, EG668871, LOC668872
Upstream genenone
Downstream geneLOC627235, LOC100043741, LOC100043742
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104G21.bB6Ng01-104G21.g
ACCDH912733DH912734
length9511,075
definitionDH912733|Mus musculus domesticus DNA, BAC clone: B6Ng01-104G21, 5' end.DH912734|Mus musculus domesticus DNA, BAC clone: B6Ng01-104G21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,519,458 - 91,520,408)(91,323,376 - 91,324,455)
sequence
gaattcaaagtccatacaagtaatcatatgtacaatcatagtttccagtt
aatgtaaagatacagtaggtaaattagtgcaaaagtagttttaattttgt
tttaagctgttgctagctattttgatgagtgactcccacccaagtctatt
ctgtctactcattgactggcactctgaaagccctggctttcttttgaatt
gcttaaatgttcatgtgtacttaagtcacaagtgaaatgttaaaagtata
gctaagtatcagaaaagtcagttactcaagtgacttataagtggacatgg
agtacaatggagtcagcttgacacgggccttttcctgatgtgcttgctgt
tcctgtgtcttgggagcaatgactccaacagctcagcataatggggatga
accagaaatggaaggggcactatgcattcaaaagtccaactcagaaagtc
ttaaatctgtgaacattcctcagtgaaaatttagactcagcaacagacct
aaggagtacactgatgttaaaaacacttctctctgcatttcacctgcaag
cttcagaaatactattagcctccaaaggatgacaccattgcatacctagc
aagtgttggctgaaaggaccctgatatagctgtctcttgtgagactaggc
tggggcctagcaaacacataagtggatgctcacagtcaggtattggatgg
atcacagggcccccaatggaggagctagagaaagtacccaaggagctaaa
gagatctgcaaccctgtaggtgcaacaacattatgaactaaccagtaacc
cggtgctcttgactctagctgcatatgtatcaaaagatggcctagtcggc
catcaattggaaagagaggcacactggacacgcaaactttatatgcccca
gtacaggggaatgccagggccaacaaatgggaatgggtgggtagggaagt
g
gaattcagcaccctcagaatatattcagaagtaccaatgcacatgaaatt
aaaaatgaaaaataattttaaaagagtgttacaatatgctctaaaatata
gtaatggtacaggaattccaatagtctctttttaaaaagggtaatgagct
aaatataaggaatgataaaaattcccctttttttcaggtgatttttctga
aatgcctttgtagctaagataaatgattataccattactgaactttcaga
tcagagatacctcctgaatgtagccccaaataaaggtcttcaagatgctt
ccacaatgttgaataactgagcaaatctggtgcgctttaaatctattgag
gtttagagctgatctgtttcagagtcaccaagatcagatttttcgcagaa
tgaaggtcaaatgtaggtttttttctcttacatcttgtagcttcactgtg
cattagctcacatctttctaaagatgaagctccaagcccccatatatttt
cggagcttagtaaaatggttttgacacatttatatatatttaggatgttt
ttgagggtaaagcccagactatcttgttcccttctctgactctgacatta
ttatcgggagactaagaagaataacactgggtagactgtttgccagactg
gataatgacctgatatattatagaaaccctagttagggttagaaaaactg
tagaatgccactgttcgatcaagactgtttgaagtatagtactgagttaa
aataaaagtcttgttagacctggtgatcctgtgataggagatttttgtct
cattagcaccagcacggaaaagttctgatccacctccggctgaaatgcca
agcttgaagctgttgtgtgcagctggctctgcaggcttccaagtcagtga
tcacggcatgtaacagcaggattatatctctgagtcccattgtccggaag
agctcacttgggctattccagtattactcaaaaggccactgggatcactg
gggaaaagcagcacatatgaaaaaagggcaagggaatcttttttcctttc
atatgaaattgggaatcatccaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_91519458_91520408
seq2: B6Ng01-104G21.b_46_996 (reverse)

seq1  CACTTCCCTACCCACCCATTCCCATTTGTTGGCCCTGGCATTCCCCTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCCTACCCACCCATTCCCATTTGTTGGCCCTGGCATTCCCCTGTA  50

seq1  CTGGGGCATATAAAGTTTGCGTGTCCAGTGTGCCTCTCTTTCCAATTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCATATAAAGTTTGCGTGTCCAGTGTGCCTCTCTTTCCAATTGAT  100

seq1  GGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCACC  150

seq1  GGGTTACTGGTTAGTTCATAATGTTGTTGCACCTACAGGGTTGCAGATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTACTGGTTAGTTCATAATGTTGTTGCACCTACAGGGTTGCAGATCT  200

seq1  CTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGA  250

seq1  TCCATCCAATACCTGACTGTGAGCATCCACTTATGTGTTTGCTAGGCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCAATACCTGACTGTGAGCATCCACTTATGTGTTTGCTAGGCCCC  300

seq1  AGCCTAGTCTCACAAGAGACAGCTATATCAGGGTCCTTTCAGCCAACACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGTCTCACAAGAGACAGCTATATCAGGGTCCTTTCAGCCAACACT  350

seq1  TGCTAGGTATGCAATGGTGTCATCCTTTGGAGGCTAATAGTATTTCTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGGTATGCAATGGTGTCATCCTTTGGAGGCTAATAGTATTTCTGAA  400

seq1  GCTTGCAGGTGAAATGCAGAGAGAAGTGTTTTTAACATCAGTGTACTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCAGGTGAAATGCAGAGAGAAGTGTTTTTAACATCAGTGTACTCCT  450

seq1  TAGGTCTGTTGCTGAGTCTAAATTTTCACTGAGGAATGTTCACAGATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCTGTTGCTGAGTCTAAATTTTCACTGAGGAATGTTCACAGATTTA  500

seq1  AGACTTTCTGAGTTGGACTTTTGAATGCATAGTGCCCCTTCCATTTCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTCTGAGTTGGACTTTTGAATGCATAGTGCCCCTTCCATTTCTGG  550

seq1  TTCATCCCCATTATGCTGAGCTGTTGGAGTCATTGCTCCCAAGACACAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCCCCATTATGCTGAGCTGTTGGAGTCATTGCTCCCAAGACACAGG  600

seq1  AACAGCAAGCACATCAGGAAAAGGCCCGTGTCAAGCTGACTCCATTGTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAAGCACATCAGGAAAAGGCCCGTGTCAAGCTGACTCCATTGTAC  650

seq1  TCCATGTCCACTTATAAGTCACTTGAGTAACTGACTTTTCTGATACTTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTCCACTTATAAGTCACTTGAGTAACTGACTTTTCTGATACTTAG  700

seq1  CTATACTTTTAACATTTCACTTGTGACTTAAGTACACATGAACATTTAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACTTTTAACATTTCACTTGTGACTTAAGTACACATGAACATTTAAG  750

seq1  CAATTCAAAAGAAAGCCAGGGCTTTCAGAGTGCCAGTCAATGAGTAGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCAAAAGAAAGCCAGGGCTTTCAGAGTGCCAGTCAATGAGTAGACA  800

seq1  GAATAGACTTGGGTGGGAGTCACTCATCAAAATAGCTAGCAACAGCTTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGACTTGGGTGGGAGTCACTCATCAAAATAGCTAGCAACAGCTTAA  850

seq1  AACAAAATTAAAACTACTTTTGCACTAATTTACCTACTGTATCTTTACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATTAAAACTACTTTTGCACTAATTTACCTACTGTATCTTTACAT  900

seq1  TAACTGGAAACTATGATTGTACATATGATTACTTGTATGGACTTTGAATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGGAAACTATGATTGTACATATGATTACTTGTATGGACTTTGAATT  950

seq1  C  951
      |
seq2  C  951

seq1: chr17_91323376_91324455
seq2: B6Ng01-104G21.g_68_1142

seq1  GAATTCAGCACCCTCAGAATATATTCAGAAGTACCAATGCACATGAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCACCCTCAGAATATATTCAGAAGTACCAATGCACATGAAATT  50

seq1  AAAAATGAAAAATAATTTTAAAAGAGTGTTACAATATGCTCTAAAATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGAAAAATAATTTTAAAAGAGTGTTACAATATGCTCTAAAATATA  100

seq1  GTAATGGTACAGGAATTCCAATAGTCTCTTTTTAAAAAGGGTAATGAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGGTACAGGAATTCCAATAGTCTCTTTTTAAAAAGGGTAATGAGCT  150

seq1  AAATATAAGGAATGATAAAAATTCCCCTTTTTTTCAGGTGATTTTTCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAAGGAATGATAAAAATTCCCCTTTTTTTCAGGTGATTTTTCTGA  200

seq1  AATGCCTTTGTAGCTAAGATAAATGATTATACCATTACTGAACTTTCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCTTTGTAGCTAAGATAAATGATTATACCATTACTGAACTTTCAGA  250

seq1  TCAGAGATACCTCCTGAATGTAGCCCCAAATAAAGGTCTTCAAGATGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGATACCTCCTGAATGTAGCCCCAAATAAAGGTCTTCAAGATGCTT  300

seq1  CCACAATGTTGAATAACTGAGCAAATCTGGTGCGCTTTAAATCTATTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAATGTTGAATAACTGAGCAAATCTGGTGCGCTTTAAATCTATTGAG  350

seq1  GTTTAGAGCTGATCTGTTTCAGAGTCACCAAGATCAGATTTTTCGCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGAGCTGATCTGTTTCAGAGTCACCAAGATCAGATTTTTCGCAGAA  400

seq1  TGAAGGTCAAATGTAGGTTTTTTTCTCTTACATCTTGTAGCTTCACTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTCAAATGTAGGTTTTTTTCTCTTACATCTTGTAGCTTCACTGTG  450

seq1  CATTAGCTCACATCTTTCTAAAGATGAAGCTCCAAGCCCCCATATATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGCTCACATCTTTCTAAAGATGAAGCTCCAAGCCCCCATATATTTT  500

seq1  CGGAGCTTAGTAAAATGGTTTTGACACATTTATATATATTTAGGATGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGCTTAGTAAAATGGTTTTGACACATTTATATATATTTAGGATGTTT  550

seq1  TTGAGGGTAAAGCCCAGACTATCTTGTTCCCTTCTCTGACTCTGACATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGTAAAGCCCAGACTATCTTGTTCCCTTCTCTGACTCTGACATTA  600

seq1  TTATCGGGAGACTAAGAAGAATAACACTGGGTAGACTGTTTGCCAGACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCGGGAGACTAAGAAGAATAACACTGGGTAGACTGTTTGCCAGACTG  650

seq1  GATAATGACCTGATATATTATAGAAACCCTAGTTAGGGTTAGAAAAACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATGACCTGATATATTATAGAAACCCTAGTTAGGGTTAGAAAAACTG  700

seq1  TAGAATGCCACTGTTCGATCAAGACTGTTTGAAGTATAGTACTGAGTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGCCACTGTTCGATCAAGACTGTTTGAAGTATAGTACTGAGTTAA  750

seq1  AATAAAAGTCTTGTTAGACCTGGTGATCCTGTGATAGGAGATTTTTGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAGTCTTGTTAGACCTGGTGATCCTGTGATAGGAGATTTTTGTCT  800

seq1  CATTAGCACCAGCACGGAAAAGTTCTGATCCACCTCCGGCTGAAATGCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGCACCAGCACGGAAAAGTTCTGATCCACCTCCGGCTGAAATGCCA  850

seq1  AGCTTGAAGCTGTTGTGTGCAGCTGGCTCTGCAGGCTTCCAAGTCAGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGAAGCTGTTGTGTGCAGCTGGCTCTGCAGGCTTCCAAGTCAGTGA  900

seq1  TCACGGCATGTAAACAGCAGGATTAGTATCTCTGAGTCCCCATTGTACGG  950
      ||||||||||| ||||||||||||| ||||||||||| |||||||| |||
seq2  TCACGGCATGT-AACAGCAGGATTA-TATCTCTGAGT-CCCATTGTCCGG  947

seq1  AAGAGCCCACTTGGCTTATTCCAGTAATACTCAAAAGGCCACTGGATCCA  1000
      |||||| |||||||  |||||||||| ||||||||||||||||||   ||
seq2  AAGAGCTCACTTGGGCTATTCCAGTATTACTCAAAAGGCCACTGGGATCA  997

seq1  CTGGGGAAAAGGCAGCAGATATGAAGAAAGGGCAAAGGGAACTTTTTCCC  1050
      |||||||||| |||||| ||||||| ||||||| |||||||  ||||  |
seq2  CTGGGGAAAA-GCAGCACATATGAAAAAAGGGC-AAGGGAATCTTTTTTC  1045

seq1  CTTTCACTATG-AATTTGGAATCATTCAGGC  1080
      |||||| |||| |||| |||||||| |||||
seq2  CTTTCA-TATGAAATTGGGAATCATCCAGGC  1075