BAC Information

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BAC

Clone NameB6Ng01-106F07
Chromosome17 (Build37)
Map Location 92,253,257 - 92,254,349
singlet/doubletsinglet
Overlap genenone
Upstream geneNrxn1, EG668871, LOC668872, LOC627235, LOC100043741, LOC100043742
Downstream geneEG640442, LOC627395, LOC676141, LOC668877
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106F07.bB6Ng01-106F07.g
ACCDH914102DH914103
length1,2701,088
definitionDH914102|Mus musculus domesticus DNA, BAC clone: B6Ng01-106F07, 5' end.DH914103|Mus musculus domesticus DNA, BAC clone: B6Ng01-106F07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacaggtaaaacacctcaaataagagttaaaataagagtaaaga
tatttggcttgttgctgttatttcctttaaaagcagattcggttatctat
ccttttatcctatcattcttataactccttttttttcttttcttctcctc
cctcttcccctaaaattatatggaagagaaagaaggataaaggaaagaaa
tagaaagagagaaagaaatcaatgaatctagcctcttttagtttatttcc
tcccagacaattgaaaacttaaaaccaacccatgtaaaacaacaaacatc
cattatttactgaatgaccaaaaacagtcaactcattttggggggaaagg
gtgtcattttcatagattttctgcttgctgtttggaagcaatagtctttt
ggaccctaagaaaactgggatattggccaagttcttggacagttggctgt
atcatttcttatcttgtggattggaaaagtggagggcttaactgaagtcc
tggcttaaacagatggtaaagctggaccatctgagttacccacactgaaa
ctgtgtaggattaagatctttgagggaacagtatttgatggagtctatga
ggtaggattaactgggtcatttgtcatgttttcttggatctctggtcctt
ttactctgaaaacatataaacttccaaaggtaatttgctgcattaccaca
tgtataaaaatctgtggtgtgcataacacagctaaagaaatttctttgtt
ctatatttgagcaggataaagggatttattaatatataaatcaggttggg
ctgattaaccaaacagtaatataaatttccacccatgccatatgatgaaa
ggcatataatagtaaatcctgagttttcatagtcaaaagatatattagct
acacagacacgttttcatgtctcagccagtctcagagatgttgctatgta
gaggaattaccattcatgttacctattttgttgtgtctttgttcttttca
tttctgtagtcagatgtcagagattatccctaatctaatcttattaattt
agtggatcatagattttctacccatgaacaaaggagaaaatcgtacccta
gtgcacttattccttttttcaatcagacgttatcacatatacatgctagc
tatcagaagttcccttcaaatacatttggagatccgagagaataccctta
ttgggaggatcatctaagagatcattgagtggctccctgtaatggggaat
tagccctcaaactactgaca
gaattcattagagcagaagaaaggagttccacaggaacgacatttcatgg
tgactcctttcaaaaaattgtaaagttttattaggctgctgcacctgcaa
agacacactggtggtcactgaataaaagtgaggattttgtcaatattctg
tgttctgttcttggcatcagcctcagtctcatccagctctgtgatccttt
tggatatttagtctccctgcacttggctcagaggcacctctgctaccagg
cataggaaatacacacaattcttaatcaggcaccctgtgaaaatggagtt
gtcaggaaacatttttgaaaacttactagggtacaagcagttttgaactt
cgccattattgggtcatcttcttttgaagttttcaagggtgaaaattgta
atagggcaatagggggttaaccccattcttcctcaatgtttttttcttcc
tccctatataatctagtcttcaaatgtctctattttcttgatgaagaatt
agtgccatattccacagtttttgctgtttctttctccatatagtatccgt
gttgtcaagactatactgacccttatttaactttaagcttttgtggccta
aagggtgtagtgagtagtgttggtgttacagccttcagtattctctaatt
cagcatatgtctcagatttgttgttcaggactgctgcggtttccccctcc
aactacagtattataactagcctctctcatgttgataagtctggttcatt
gtctctcctctttatccaacttcaatagatttataatatttctaaaactg
taacatttttggtcctctcccatggcataagtcttcttctctaagagaca
gtagaaaaggagctggctaacttccagaatttgctgttgtttttcttttt
cttgctaattatttgcttagaacttatgcctcttgtgaatagcatcaagg
atcttgaaaaatgtcctcacaagtaactatctacctgcttgtgtttaaac
cccaaatttcctcggttatctcttcattaaacattatttcggcagggtac
ttcattctgtaatcatgtccatgggaggagaaaaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_92253257_92254349
seq2: B6Ng01-106F07.g_69_1156

seq1  GAATTCATTAGAGCAGAAGAAAGGAGTTCCACAGGAACGACATTTCATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGAGCAGAAGAAAGGAGTTCCACAGGAACGACATTTCATGG  50

seq1  TGACTCCTTTCAAAAAATTGTAAAGTTTTATTAGGCTGCTGCACCTGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCTTTCAAAAAATTGTAAAGTTTTATTAGGCTGCTGCACCTGCAA  100

seq1  AGACACACTGGTGGTCACTGAATAAAAGTGAGGATTTTGTCAATATTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACTGGTGGTCACTGAATAAAAGTGAGGATTTTGTCAATATTCTG  150

seq1  TGTTCTGTTCTTGGCATCAGCCTCAGTCTCATCCAGCTCTGTGATCCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGTTCTTGGCATCAGCCTCAGTCTCATCCAGCTCTGTGATCCTTT  200

seq1  TGGATATTTAGTCTCCCTGCACTTGGCTCAGAGGCACCTCTGCTACCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATTTAGTCTCCCTGCACTTGGCTCAGAGGCACCTCTGCTACCAGG  250

seq1  CATAGGAAATACACACAATTCTTAATCAGGCACCCTGTGAAAATGGAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGAAATACACACAATTCTTAATCAGGCACCCTGTGAAAATGGAGTT  300

seq1  GTCAGGAAACATTTTTGAAAACTTACTAGGGTACAAGCAGTTTTGAACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGAAACATTTTTGAAAACTTACTAGGGTACAAGCAGTTTTGAACTT  350

seq1  CGCCATTATTGGGTCATCTTCTTTTGAAGTTTTCAAGGGTGAAAATTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCATTATTGGGTCATCTTCTTTTGAAGTTTTCAAGGGTGAAAATTGTA  400

seq1  ATAGGGCAATAGGGGGTTAACCCCATTCTTCCTCAATGTTTTTTTCTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGCAATAGGGGGTTAACCCCATTCTTCCTCAATGTTTTTTTCTTCC  450

seq1  TCCCTATATAATCTAGTCTTCAAATGTCTCTATTTTCTTGATGAAGAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTATATAATCTAGTCTTCAAATGTCTCTATTTTCTTGATGAAGAATT  500

seq1  AGTGCCATATTCCACAGTTTTTGCTGTTTCTTTCTCCATATAGTATCCGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCATATTCCACAGTTTTTGCTGTTTCTTTCTCCATATAGTATCCGT  550

seq1  GTTGTCAAGACTATACTGACCCTTATTTAACTTTAAGCTTTTGTGGCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCAAGACTATACTGACCCTTATTTAACTTTAAGCTTTTGTGGCCTA  600

seq1  AAGGGTGTAGTGAGTAGTGTTGGTGTTACAGCCTTCAGTATTCTCTAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTGTAGTGAGTAGTGTTGGTGTTACAGCCTTCAGTATTCTCTAATT  650

seq1  CAGCATATGTCTCAGATTTGTTGTTCAGGACTGCTGCGGTTTCCCCCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATATGTCTCAGATTTGTTGTTCAGGACTGCTGCGGTTTCCCCCTCC  700

seq1  AACTACAGTATTATAACTAGCCTCTCTCATGTTGATAAGTCTGGTTCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACAGTATTATAACTAGCCTCTCTCATGTTGATAAGTCTGGTTCATT  750

seq1  GTCTCTCCTCTTTATCCAACTTCAATAGATTTATAATATTTCTAAAACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCCTCTTTATCCAACTTCAATAGATTTATAATATTTCTAAAACTG  800

seq1  TAACA-TTTTGGTCCTCTCCCATGGCATAAGTCTTCTTCTCTAAGAGACA  849
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTTTTGGTCCTCTCCCATGGCATAAGTCTTCTTCTCTAAGAGACA  850

seq1  GTAGAGAAGGAGCTGGCTAACTTCCAGAATTTGCTGTTGTTTTTCTTTTT  899
      ||||| ||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTAGAAAAGGAGCTGGCTAACTTCCAGAATTTGCTGTTGTTTTTC-TTTT  899

seq1  TCTTGCTAATTATTTGCCTTAGAACTTATGCCTCTTGTGAATAGCATCAA  949
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCTTGCTAATTATTTG-CTTAGAACTTATGCCTCTTGTGAATAGCATCAA  948

seq1  GGATCCTGAAAAAATGT-CTCACAAGTAACTATCTACCTGCTTGTGTTTA  998
      ||||| || |||||||| ||||||||||||||||||||||||||||||||
seq2  GGATCTTG-AAAAATGTCCTCACAAGTAACTATCTACCTGCTTGTGTTTA  997

seq1  TACCCCCATATTTCCTCGGTTATCTCTTCATTAACATTTATTTCTGGCAG  1048
       | ||||| |||||||||||||||||||||||||   ||||||| |||||
seq2  -AACCCCAAATTTCCTCGGTTATCTCTTCATTAAACATTATTTC-GGCAG  1045

seq1  TGGTACCTCAATCCTGTAATCATGTCCATGGGAGGAGAAAAAGGA  1093
       ||||| || || ||||||||||||||||||||||||||||||||
seq2  -GGTACTTC-ATTCTGTAATCATGTCCATGGGAGGAGAAAAAGGA  1088