BAC Information

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BAC

Clone NameB6Ng01-107P07
Chromosome17 (Build37)
Map Location 33,043,272 - 33,043,599
singlet/doubletsinglet
Overlap geneCyp4f14
Upstream geneHsf2bp, Rrp1b, LOC435518, Notch3, Pdxk-ps, Abhd9, Brd4, LOC100043434, LOC100043433, Akap8, Akap8l, Wiz, A430107D22Rik, Pglyrp2, 4732474A20Rik, EG208285, Cyp4f16, LOC667178, LOC677156, EG631304, Cyp4f15, LOC623809, 9030612M13Rik, Zfp811, 6030490I01Rik, LOC631266, BC066107
Downstream geneCyp4f13, 6030422M01Rik, Zfp472, C920016K16Rik, 1700065O13Rik, 4921501E09Rik, Zfp563, Morc2b, LOC100038859, LOC100038860, LOC100043474, Zfp422-rs1, Olfr63, LOC100043468, Zfp81, Zfp101, 1700029I08Rik, LOC100042953, Adamts10, Myo1f, Zfp414, Pram1, Hnrpm, March2, Rab11b, Angptl4, Ankrd47, Rps28, Ndufa7, Cd320, LOC100042967, LOC630219, LOC100042970
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107P07.bB6Ng01-107P07.g
ACCDH915270DH915271
length1,229328
definitionDH915270|Mus musculus domesticus DNA, BAC clone: B6Ng01-107P07, 5' end.DH915271|Mus musculus domesticus DNA, BAC clone: B6Ng01-107P07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacagtggagatacaccttatgtgtgtaagcagtgtggcaaagcc
tttgttcgttcctcacaccttcttgtccatgaaaggactcacactggaga
gaaaccttatacatgtaagcattgtgggaaagccttcagtcatcacagtg
cctgctacagacacgaagtaattcacactgaagagaaaccctatgtctgt
aagcagtgtgggaaagcattcacttgttctacatcccttcgcaatcacgg
aagaattcacactggagaaaaaccttacgcatgtaagcagtgtggcaaat
ccttcatccaacgagatgcttgctacaatcacgaaagaactcatactgga
gagaagccctatgtgtgtaagcagtgtgggaaagcatttacatggtccac
atgccttcgcaaccatgaaaggactcacactggagagaaaccttacacat
gtaagcattgtgggaaagccttcacccattccagtacccggtatagtcat
gaaagaattcatactggagagaaaccatacgtatgtaaaaagtgtggcaa
ggcattcattcattccagtcatcttatcagccatgaaaagatccacactg
gagagaaaccgtatccatgcaagcattgtgggaaagccttcattcaacgg
aaggcgtgtcacaatcatgaaagaactcatactggagagaaaccctatgc
atgtaaatattgtgaaaaagcatttaggtgttccacataccttcggaacc
atgaaagaactcacactggagagaaaccttatatatgtaagcattgtgga
aaagcctttacacatcagagtgcccgttaccgtcatgaacgaattcacac
tggagagaaaccctacgtgtgtaaaaatgtgggaaagcattcagtgattg
tagctaccttgtgaagcatgaaagattccattggagagaaactttacaac
atgtaagaatcaagaagcttttatgtgttccacatttctttaaacacaca
aaagagctgaaagaagaagagctgagaactttacagcagtgtatctggtg
gacttgtcttgtgcacaaccttatatgcatgaaaaaatgtgagaaacagc
tcacaagagaggcctcgctataaagtgctgtacttagcttgaattgagtc
gttccagggaacctattggtgatgaatatcccaatttacctggatcatgg
taacttgtgacctcccaacaacctccctc
caaagatgctgatgagacagatgatacctgtgggagaagaggtgggggag
ggggcgtgttcacgacaagactctgctgcttgcccaggacccctttcccc
atacggcacctttgggaatggtccggccatctgggagcagaatgtcctgg
gtgcagcatcgggagatgaccgtgactgggggatgcagtcgcagactctc
cttgatgcacatggtcaggaagggtagctgggccaggtcgtccctaagga
aaccccttcaactattaaccagggatcaaaaggaggctgacagttcatgt
ggatcagtgaaatattttctcacagtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_33043272_33043599
seq2: B6Ng01-107P07.g_74_401

seq1  CAAAGATGCTGATGAGACAGATGATACCTGTGGGAGAAGAGGTGGGGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATGCTGATGAGACAGATGATACCTGTGGGAGAAGAGGTGGGGGAG  50

seq1  GGGGCGTGTTCACGACAAGACTCTGCTGCTTGCCCAGGACCCCTTTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCGTGTTCACGACAAGACTCTGCTGCTTGCCCAGGACCCCTTTCCCC  100

seq1  ATACGGCACCTTTGGGAATGGTCCGGCCATCTGGGAGCAGAATGTCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGGCACCTTTGGGAATGGTCCGGCCATCTGGGAGCAGAATGTCCTGG  150

seq1  GTGCAGCATCGGGAGATGACCGTGACTGGGGGATGCAGTCGCAGACTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGCATCGGGAGATGACCGTGACTGGGGGATGCAGTCGCAGACTCTC  200

seq1  CTTGATGCACATGGTCAGGAAGGGTAGCTGGGCCAGGTCGTCCCTAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGCACATGGTCAGGAAGGGTAGCTGGGCCAGGTCGTCCCTAAGGA  250

seq1  AACCCCTTCAACTATTAACCAGGGATCAAAAGGAGGCTGACAGTTCATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCTTCAACTATTAACCAGGGATCAAAAGGAGGCTGACAGTTCATGT  300

seq1  GGATCAGTGAAATATTTTCTCACAGTGT  328
      ||||||||||||||||||||||||||||
seq2  GGATCAGTGAAATATTTTCTCACAGTGT  328