BAC Information

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BAC

Clone NameB6Ng01-108F19
Chromosome17 (Build37)
Map Location 59,564,094 - 59,565,298
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC620408, EG545216, LOC668648, 2610034M16Rik, Nudt12, 4930505H01Rik, LOC100043537
Downstream geneLOC100043542
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108F19.bB6Ng01-108F19.g
ACCDH915567DH915568
length1,1841,223
definitionDH915567|Mus musculus domesticus DNA, BAC clone: B6Ng01-108F19, 5' end.DH915568|Mus musculus domesticus DNA, BAC clone: B6Ng01-108F19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatggcctgtaactcctgtttcaatggatctaatgctcttttct
gatctccacagggacaaggtacacacacagcaaacattcatatatgtagg
caaaataaaagtaaatgaagatatacactttaaaatttcaaatgtttaca
ttgatctctgaggaaaatacaagaaacagggagaacactaaacaaatata
cacatatattttcctacaaataaatgttgggttaataaatactttgaact
aagtaaaatgaagtttaaaactataaaacgagggtattttattgactcaa
gtaaaatgagctttatttttaagtaaaaattaaatttagcacctcttgga
gtttgcgtgtgttgagtcagatataagagtgtttgtatatatataaaact
ggtgctccactacagttcacaaagctccagaagctaatggatggtcacgg
ggattgctcatgagagcataaaccttaacaggcagtgctgtgggaggatt
tgttttctatcaagccaccctttgttattctggcatttgtcttctccaag
aatttgtgaagccgtgctgaagactccaacacctcttcacatgatgcttt
cttctctatctgcagaagatatccctatggcagacagtatgagagacaca
ggtgttcacttcacatgaactttagaaaaggaaacacctcccacgctcaa
attctattttaagaaataaaattagagaaatgcagtatagatttgtggtg
ttatatttctattgcttctttttcatatatatatatatatatatatattt
ttttttttttttgagacagggtttctctgtgtagccctgactgtcctgga
actcactttgtagaccaagctggccttgaactcagaaatccccctgcttc
tgcctcccaagtgctgggattaaaggtgtgcaccaccactcacagctttc
tataaacttaaagagaaatttagtacatacttacatttgcaataaaaaaa
ataatcattctctatggcaaactcactatagcacacacaacctttacaat
atgagatgcgattcatgaaagcagcctctccgcacagtgactgggtatga
gaacacacattcttttgtttgtaagcactgtctctggatcctctttcctt
ctatgccaattgaacacacttcactggtctctaa
gaattcctgtgtttaagcccatcatgtttttttgcgtgaagttgttctca
tcctatggctttcacagcgtttcttcagaaattataatgtcttttcagac
atggattacaaggaaattcaatgtagttttattcacacctccctaataga
taataatgtcaaatatttatttgtttattattaactcatactgtattttg
agaactttgtttatttccttgtgccatttactgatttggatttttgtatt
ttgaatagttacttttatgagttctttgcgtattctgtaaattaattcac
catcagatcaacacttaaccaaatatagcctcaaattctatgtgctatcc
attatttttgtcctcagctaagcataagtttattattacattgagtcatg
ttagttaattttaattttcttcttcaaattacacacaaaaatatataata
aactaatgatttactttagaatatttataagctaatttttctttacaaca
ttaaactgataaaacataaatatattttaaatagtgcacataagttctgc
tataaaatataaagctcaacaaacacatacagacatagacacacacaata
ttgtacacacatgaatctcatttttttcaatggatgccatattatacaaa
atacttgtaaggttaaaaactgtgctttcataacatattatgagacttta
actctccagggatgccattggggtttatggtttggtaacctatggagcct
gcccttaagagtggttcgtttctccatgaaaactctgttggtaaaaaaat
aatttccatttgggagtggttatcaatagggcatatcttctgggttagac
acaagccttttgtacactactcctctcagcactgggacatatctggacga
aagggctctgtgacacttacagtctctgagttatatgtgcgtcagtcctg
tatttctggagatcatttcgttcatgtcttccatgtctctcagctctaca
atgtcctactctacgtctgcagttctagtcagaggatggtataatggaag
acatccatttagactgagtccagatctctcaagcattcactatgtcatgg
tggaactttattttgtacggatattgcaagaacttctctgatgttgctga
agagattcgtactaggtacgaatcctagacttatgtcacttgttcgagca
tagaatgtgttcactaggctgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_59564094_59565298
seq2: B6Ng01-108F19.b_45_1228

seq1  GAATTCAATGGCCTGTAACTCCTGTTTCAATGGATCTAATGCTCTTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGGCCTGTAACTCCTGTTTCAATGGATCTAATGCTCTTTTCT  50

seq1  GATCTCCACAGGGACAAGGTACACACACAGCAAACATTCATATATGTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCCACAGGGACAAGGTACACACACAGCAAACATTCATATATGTAGG  100

seq1  CAAAATAAAAGTAAATGAAGATATACACTTTAAAATTTCAAATGTTTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAAAAGTAAATGAAGATATACACTTTAAAATTTCAAATGTTTACA  150

seq1  TTGATCTCTGAGGAAAATACAAGAAACAGGGAGAACACTAAACAAATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTCTGAGGAAAATACAAGAAACAGGGAGAACACTAAACAAATATA  200

seq1  CACATATATTTTCCTACAAATAAATGTTGGGTTAATAAATACTTTGAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATATTTTCCTACAAATAAATGTTGGGTTAATAAATACTTTGAACT  250

seq1  AAGTAAAATGAAGTTTAAAACTATAAAACGAGGGTATTTTATTGACTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAATGAAGTTTAAAACTATAAAACGAGGGTATTTTATTGACTCAA  300

seq1  GTAAAATGAGCTTTATTTTTAAGTAAAAATTAAATTTAGCACCTCTTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATGAGCTTTATTTTTAAGTAAAAATTAAATTTAGCACCTCTTGGA  350

seq1  GTTTGCGTGTGTTGAGTCAGATATAAGAGTGTTTGTATATATATAAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCGTGTGTTGAGTCAGATATAAGAGTGTTTGTATATATATAAAACT  400

seq1  GGTGCTCCACTACAGTTCACAAAGCTCCAGAAGCTAATGGATGGTCACGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTCCACTACAGTTCACAAAGCTCCAGAAGCTAATGGATGGTCACGG  450

seq1  GGATTGCTCATGAGAGCATAAACCTTAACAGGCAGTGCTGTGGGAGGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCTCATGAGAGCATAAACCTTAACAGGCAGTGCTGTGGGAGGATT  500

seq1  TGTTTTCTATCAAGCCACCCTTTGTTATTCTGGCATTTGTCTTCTCCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTATCAAGCCACCCTTTGTTATTCTGGCATTTGTCTTCTCCAAG  550

seq1  AATTTGTGAAGCCGTGCTGAAGACTCCAACACCTCTTCACATGATGCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTGAAGCCGTGCTGAAGACTCCAACACCTCTTCACATGATGCTTT  600

seq1  CTTCTCTATCTGCAGAAGATATCCCTATGGCAGACAGTATGAGAGACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTATCTGCAGAAGATATCCCTATGGCAGACAGTATGAGAGACACA  650

seq1  GGTGTTCACTTCACATGAACTTTAGAAAAGGAAACACCTCCCACGCTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTCACTTCACATGAACTTTAGAAAAGGAAACACCTCCCACGCTCAA  700

seq1  ATTCTATTTTAAGAAATAAAATTAGAGAAATGCAGTATAGATTTGTGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTATTTTAAGAAATAAAATTAGAGAAATGCAGTATAGATTTGTGGTG  750

seq1  TTATATTTCTATTGCTTCTTTTTCATATATATATATATATATATATA-TT  799
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTATATTTCTATTGCTTCTTTTTCATATATATATATATATATATATATTT  800

seq1  TTTTTTTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGACTGTCCTGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGACTGTCCTGGA  850

seq1  ACTCACTTTGTAGACCAAGCTGGCCTTGAACTCAGAAATCCCCCTGCTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTTTGTAGACCAAGCTGGCCTTGAACTCAGAAATCCCCCTGCTTC  900

seq1  TGCCTCCCAAGTGCTGGGATTAAAGGTGTGCACCACCACTCACAGCTTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGCCTCCCAAGTGCTGGGATTAAAGGTGTGCACCACCACTCACAGCTTT-  949

seq1  CTATAAACTTAAAGAGAAATTTAAGTAACAATACTTACATTTGCAATAAA  999
      |||||||||||||||||||||| ||||   ||||||||||||||||||||
seq2  CTATAAACTTAAAGAGAAATTT-AGTA--CATACTTACATTTGCAATAAA  996

seq1  AAAAATAATCATTCTCTATGGCAAACTCCACTATAGCACACACAACCTTT  1049
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AAAAATAATCATTCTCTATGGCAAACT-CACTATAGCACACACAACCTTT  1045

seq1  ACAATAATGAGATGCGGATTCATGAAAAGCAGCCTCTCCGCACAGGTGAC  1099
      ||||| ||||||||| |||||||| ||||||||||||||||||| |||||
seq2  ACAAT-ATGAGATGC-GATTCATG-AAAGCAGCCTCTCCGCACA-GTGAC  1091

seq1  TGGAGTATGAGAACACACATTTCTTTGTTGGTAAGCAGCCTGTCTTCTGG  1149
      ||| |||||||||||||||||  |||||| |||||||  ||||| |||||
seq2  TGG-GTATGAGAACACACATTCTTTTGTTTGTAAGCA--CTGTC-TCTGG  1137

seq1  ATCCCTTCTTCCCTTCTATGCAAAATTGGACACAACACTTTCCACCTGGT  1199
      ||||  |||| ||||||||||  ||||| ||   ||||||  || |||||
seq2  ATCC--TCTTTCCTTCTATGC-CAATTGAAC---ACACTT--CA-CTGGT  1178

seq1  CTCTAA  1205
      ||||||
seq2  CTCTAA  1184