BAC Information

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BAC

Clone NameB6Ng01-109N07
Chromosome17 (Build37)
Map Location 76,036,007 - 76,037,034
singlet/doubletsinglet
Overlap genenone
Upstream geneBirc6, Ttc27, LOC100043672, Ltbp1, EG621988, Rasgrp3, 2810405J04Rik
Downstream geneLOC668787, LOC100043885, LOC100043886
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109N07.bB6Ng01-109N07.g
ACCDH916627DH916628
length7711,009
definitionDH916627|Mus musculus domesticus DNA, BAC clone: B6Ng01-109N07, 5' end.DH916628|Mus musculus domesticus DNA, BAC clone: B6Ng01-109N07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgaaattcttaggcaaatggatggaactagaaaatatcatcct
gagtaatttaacacagtcacaaaagaacagacatggtatgtactcattga
taagtggatattagcccagagtctctgaatacccaagacacaattcacag
accacatgaagctcaagaagaagggagaccaaagtatggatactttggtc
cttcttagaagtgggaacaaaatacccgtgggaggagttgcagagacaaa
gcatggagcagagactgaagaatgaccatccacagactgccccacctggg
gatccatctcatatacagtcaccaaacccagacactattctgggtgccaa
caagtgcttgttaaaaggattctgatatagctctctcctgagaggctcta
ctagtgcctgacaaatacataggtggaagttctcagccaaccatgggact
gagcacagggttcccaatgaaggaactagagaaagggcccaaggagctga
aggggtttgtagtttcataggtggaacaacaaaatgaatcaaccagtacc
cccaaagctcccagggacgaaatcaccaaccaaagagtacacatggaggg
acccatggctccaaacacatttgtaacagaagatggccttgtcagacatc
attgggaggagaggctcttggtcctgtaaaggctctatgccccagtgtag
gggaatgccagggccaggaagcaggagtacataggttggtgagcagagga
aggggggatgatagggaggtt

gaattccaggccaaactgggatatatagagtaactctattattcgtaaat
ttataaaatataaagagaaagaaatactatttcttttttttacccaccac
aaacctctgaaaatattttatgtttgaaagagggcaatcctataggtcat
aaagcagtttcagataaaatattagtggtcaacattgcaaacctcatgga
gaaaacagcattcctcacctttctgttttgtggatgaagctctgataaga
cattaattactctttgctacttctaccatgtttcgattaatcttggtaaa
gaaagctagcaatccataaaagaagtttaaaaaccagcagaagagagtgg
agtttctcactttctttctgcctatcctgacatcttaaatctattcaaac
cacaccgagagttctgcttcgaatgtaaaccgtgatgcatggaacattga
gaattatgtcatacaaaaagaattatcttcatacaaaagcatctacaaca
gatgcatcctctgatgcttttgtatgaagcatctgtcatgctgcaggccg
ggttggtatctatggtctgtgctgctgcaggctgctattggcaaggaaac
ttctgttgaaattctatcaatgacaacagtcgcatagctgagcgtgagag
acgttgaaggcaactttgacacccccaccctgaccgacaacaaaaacaaa
taaaaatgaaacagttcagatagtgactgaagagagcccttaaccacgat
aaagatggtgaagtagagctctctccatcattgatggcctctggtggtag
tcaggaatagaggggtggataagggaccagttgtcttaaaggggttggct
ggacactgggagttcgatcatgctccattaaggatagggcaacacaattg
gactttttttttttgagggggagggtaaacctggagatgggagtgatgta
tgggagcattgtatgaattctcaataattcatagtattatgttggggaaa
tgaagttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_76036007_76037034
seq2: B6Ng01-109N07.g_67_1075

seq1  GAATTCCAGGCCAAACTGGGATATATAGAGTAACTCTATTATTCGTAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCCAAACTGGGATATATAGAGTAACTCTATTATTCGTAAAT  50

seq1  TTATAAAATATAAAGAGAAAGAAATACTATTTCTTTTTTTTACCCACCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAATATAAAGAGAAAGAAATACTATTTCTTTTTTTTACCCACCAC  100

seq1  AAACCTCTGAAAATATTTTATGTTTGAAAGAGGGCAATCCTATAGGTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCTGAAAATATTTTATGTTTGAAAGAGGGCAATCCTATAGGTCAT  150

seq1  AAAGCAGTTTCAGATAAAATATTAGTGGTCAACATTGCAAACCTCATGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGTTTCAGATAAAATATTAGTGGTCAACATTGCAAACCTCATGGA  200

seq1  GAAAACAGCATTCCTCACCTTTCTGTTTTGTGGATGAAGCTCTGATAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAGCATTCCTCACCTTTCTGTTTTGTGGATGAAGCTCTGATAAGA  250

seq1  CATTAATTACTCTTTGCTACTTCTACCATGTTTCGATTAATCTTGGTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATTACTCTTTGCTACTTCTACCATGTTTCGATTAATCTTGGTAAA  300

seq1  GAAAGCTAGCAATCCATAAAAGAAGTTTAAAAACCAGCAGAAGAGAGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTAGCAATCCATAAAAGAAGTTTAAAAACCAGCAGAAGAGAGTGG  350

seq1  AGTTTCTCACTTTCTTTCTGCCTATCCTGACATCTTAAATCTATTCAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTCACTTTCTTTCTGCCTATCCTGACATCTTAAATCTATTCAAAC  400

seq1  CACACCGAGAGTTCTGCTTCGAATGTAAACCGTGATGCATGGAACATTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCGAGAGTTCTGCTTCGAATGTAAACCGTGATGCATGGAACATTGA  450

seq1  GAATTATGTCATACAAAAAGAATTATCTTCATACAAAAGCATCTACAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATGTCATACAAAAAGAATTATCTTCATACAAAAGCATCTACAACA  500

seq1  GATGCATCCTCTGATGCTTTTGTATGAAGCATCTGTCATGCTGCAGGCCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCATCCTCTGATGCTTTTGTATGAAGCATCTGTCATGCTGCAGGCCG  550

seq1  GGTTGGTATCTATGGTCTGTGCTGCTGCAGGCTGCTATTGGCAAGGAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTATCTATGGTCTGTGCTGCTGCAGGCTGCTATTGGCAAGGAAAC  600

seq1  TTCTGTTGAAATTCTATCAATGACAACAGTCGCATAGCTGAGCGTGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTGAAATTCTATCAATGACAACAGTCGCATAGCTGAGCGTGAGAG  650

seq1  ACGTTGAAGGCAACTTTGACACCCCCACCCTGACCGACAACAAAAACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTGAAGGCAACTTTGACACCCCCACCCTGACCGACAACAAAAACAAA  700

seq1  TAAAAATGAAACAGTTCAGATAGTGACTGAAGAGAGCCCTTAACCACGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGAAACAGTTCAGATAGTGACTGAAGAGAGCCCTTAACCACGAT  750

seq1  AAAGATGGTGAAGTAGAGCTCTCTCCATCATTGATGGCCTCTGGTGGTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGGTGAAGTAGAGCTCTCTCCATCATTGATGGCCTCTGGTGGTAG  800

seq1  TCAGGAATAGAGGGGTGGATAAGGGACCAGTTGTCTTTAAGGGGTTGGCT  850
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCAGGAATAGAGGGGTGGATAAGGGACCAGTTGTCTTAAAGGGGTTGGCT  850

seq1  GGACACTGGGAGTTCGATCATGCTCCATTAAGGATAAGGGCAACACAAAT  900
      ||||||||||||||||||||||||||||||||||| |||||||||| |||
seq2  GGACACTGGGAGTTCGATCATGCTCCATTAAGGAT-AGGGCAACAC-AAT  898

seq1  TGGACTTTTTTTTTTTTTGAGGGGGAGGGTAAACCTGGGAGGAATGGGAA  950
      |||||  ||||||||||||||||||||||||||||| ||||  ||||| |
seq2  TGGAC--TTTTTTTTTTTGAGGGGGAGGGTAAACCT-GGAG--ATGGG-A  942

seq1  GTGAATGTAATTGGGAGGCATTGTATGAAATTCTCAAATAATTTACAAAA  1000
      ||| |||||  ||||| |||||||||| ||||||| |||||||    | |
seq2  GTG-ATGTA--TGGGA-GCATTGTATG-AATTCTC-AATAATT---CATA  983

seq1  GTATTATGTTGGGGAAAAATGAAGTTTA  1028
      ||||||||||||||  ||||||||||||
seq2  GTATTATGTTGGGG--AAATGAAGTTTA  1009


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