BAC Information

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BAC

Clone NameB6Ng01-109N15
Chromosome17 (Build37)
Map Location 22,430,032 - 22,430,998
singlet/doubletsinglet
Overlap geneEG631624
Upstream geneV1rf3, A830058L05Rik, Zfp54, Zfp51, Zfp53, LOC100042508, Zfp52, BC049807, Zfp760, BC043476, 4930515G13Rik, 2610036F08Rik, LOC624960, 3110048L19Rik, 4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010, EG665844, EG210853, LOC671007, EG240038
Downstream gene6330416L07Rik, Zfp758, 1300003B13Rik, EG210876, LOC100042656, EG628185, ENSMUSG00000046088, EG383218, EG433078, LOC100042679, A630033E08Rik, LOC671128, LOC665961, EG434701, LOC665976, LOC100042225, LOC100042234, EG665988, LOC100042248, Zfp40, LOC100042257, LOC100042261, Vmn2r-ps133, EG666002
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109N15.bB6Ng01-109N15.g
ACCDH916643DH916644
length9671,213
definitionDH916643|Mus musculus domesticus DNA, BAC clone: B6Ng01-109N15, 5' end.DH916644|Mus musculus domesticus DNA, BAC clone: B6Ng01-109N15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttctaaattgcatgcacaccttgtgggggaatattgaccact
gaaatgcacgtgaatgcattcataagtagaatattaccatgtaggacaca
cctgtctttaaatggaatgtccatgtgctaaatgttctaagccagtggtt
ctaggcctttctaatgctgaaaccttttaatacagtacaaggaactcatg
aattaatatatgtacatggggtaggcctatctgtagattgatataaaaga
ggtgtatcagtccctaaggcaatcagaaatacatgatttagggtagcctt
aggtgactcttgtgaaagagtctatgccccaaggcatcatgaccctaagg
ttgagaactgttctaggcaatgccaaggcagaatcatcaagatgcaggta
tggcagaaactctctgagggctgctactcataggaggatatgcatgaaga
taaagtgaatcatttccacagtactcgcagatttataaaggactcattct
atatcatcttttgcctgagtatattttattccatatcttatttaatcttc
atggctccatgggaaaacataattttcagagcaataataccgattatgat
aatgcaattgtaaaatgaaacagaatttagtattttctctatttttatat
gtttcatagcttttagtaaggatttgcagtatttttttcagcatctactt
ttttttaactttacccaatatttatttttaaggcacattttattagatat
tttcttcatttacatttcaagtgctatccccagagcccccataccctccc
cacaccctgctccccaaccaacccactccagcttcctaacacgggcattc
ccctgtagtgagccatatgatcttcataatactaagggaccctcctccca
ttgatggccgactatgacatcctctgatacctatgcaactagagacacag
ttgggggggggggttat
gaattctctcatgaattctaagaccacttttgagggtaaagcatttgtca
cattcactacatttgtaaggattctctcctgtatgcattctctgatgagt
tacaagactgtattttttgataaagcatttgtcacattcactacatttgt
agggtttctctccggtatgaattctctgatgaattataagttggcctttc
tgggtaaaagatttgtcacattcactacatttgtaaggtttctctcctgt
atgaattctctgatgaattctaagctctcctttcagggtaaagcatttgc
cacatgcattacatttgtaaggtttctctcctgtatgaattttctgatga
ataataagaatgtatttatgggaaaagcatttgttgcattcactacattt
gtaaggtttttctcctgtatgaattctctgatgtctttttaaactggatt
tctgggtaaaagatttgatacattcattacatttgtaaggtttccctctt
gtatgaactggctgatgaattctaagatcacttttgagggcaaaacagtt
gtcatgttcactacttttgcaaagtttctctcctatatgatttcgctgat
gacttttaagatcgcatagctgggtgaagcattcctcacattcactacat
ttgtaaggtttctttccactattggttggtttcagcatgcgtttttcttt
agactcaaaaatcttatcaaactctgtaccattgtgttctttcttattta
tgtggattccttgatttagactaatgatagaacacacactaaacagttta
cacaatttttatattttacaaggttctctgatgtttccagttctatgtct
gtttagctttgatgattcaacagttgtatctctgagttaattttataagg
acttttttgggtggatgcatgggtgatttagcaagctcatggcatttata
gactctctgatattcaaatgctggtggacatttgctgtgcgtcttcatca
agaattctatatttgtacattatatgatcattttctgaaaactgcataga
atagcagcgattagtaatgagttaacacaatccaagtctcctaaatttta
gataaatctcagaaaagactggagacggctttgtccacccatacagagtc
aggactgattctctcattggatggaagaagtgtgatggcccctcctcgtc
gcttcattaaacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_22430032_22430998
seq2: B6Ng01-109N15.b_49_1015

seq1  GAATTCTTTTCTAAATTGCATGCACACCTTGTGGGGGAATATTGACCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTAAATTGCATGCACACCTTGTGGGGGAATATTGACCACT  50

seq1  GAAATGCACGTGAATGCATTCATAAGTAGAATATTACCATGTAGGACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCACGTGAATGCATTCATAAGTAGAATATTACCATGTAGGACACA  100

seq1  CCTGTCTTTAAATGGAATGTCCATGTGCTAAATGTTCTAAGCCAGTGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTTTAAATGGAATGTCCATGTGCTAAATGTTCTAAGCCAGTGGTT  150

seq1  CTAGGCCTTTCTAATGCTGAAACCTTTTAATACAGTACAAGGAACTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCCTTTCTAATGCTGAAACCTTTTAATACAGTACAAGGAACTCATG  200

seq1  AATTAATATATGTACATGGGGTAGGCCTATCTGTAGATTGATATAAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATATATGTACATGGGGTAGGCCTATCTGTAGATTGATATAAAAGA  250

seq1  GGTGTATCAGTCCCTAAGGCAATCAGAAATACATGATTTAGGGTAGCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTATCAGTCCCTAAGGCAATCAGAAATACATGATTTAGGGTAGCCTT  300

seq1  AGGTGACTCTTGTGAAAGAGTCTATGCCCCAAGGCATCATGACCCTAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGACTCTTGTGAAAGAGTCTATGCCCCAAGGCATCATGACCCTAAGG  350

seq1  TTGAGAACTGTTCTAGGCAATGCCAAGGCAGAATCATCAAGATGCAGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAACTGTTCTAGGCAATGCCAAGGCAGAATCATCAAGATGCAGGTA  400

seq1  TGGCAGAAACTCTCTGAGGGCTGCTACTCATAGGAGGATATGCATGAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGAAACTCTCTGAGGGCTGCTACTCATAGGAGGATATGCATGAAGA  450

seq1  TAAAGTGAATCATTTCCACAGTACTCGCAGATTTATAAAGGACTCATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGAATCATTTCCACAGTACTCGCAGATTTATAAAGGACTCATTCT  500

seq1  ATATCATCTTTTGCCTGAGTATATTTTATTCCATATCTTATTTAATCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATCTTTTGCCTGAGTATATTTTATTCCATATCTTATTTAATCTTC  550

seq1  ATGGCTCCATGGGAAAACATAATTTTCAGAGCAATAATACCGATTATGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCCATGGGAAAACATAATTTTCAGAGCAATAATACCGATTATGAT  600

seq1  AATGCAATTGTAAAATGAAACAGAATTTAGTATTTTCTCTATTTTTATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAATTGTAAAATGAAACAGAATTTAGTATTTTCTCTATTTTTATAT  650

seq1  GTTTCATAGCTTTTAGTAAGGATTTGCAGTATTTTTTTCAGCATCTACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATAGCTTTTAGTAAGGATTTGCAGTATTTTTTTCAGCATCTACTT  700

seq1  TTTTTTAACTTTACCCAATATTTATTTTTAAGGCACATTTTATTAGATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAACTTTACCCAATATTTATTTTTAAGGCACATTTTATTAGATAT  750

seq1  TTTCTTCATTTACATTTCAAGTGCTATCCCCAGAGCCCCCATACCCTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCATTTACATTTCAAGTGCTATCCCCAGAGCCCCCATACCCTCCC  800

seq1  CACACCCTGCTCCCCAACCAACCCACTCCAGCTTCCTAACACGGGCATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCTGCTCCCCAACCAACCCACTCCAGCTTCCTAACACGGGCATTC  850

seq1  CCCTGTAGTGAGCCATATGATCTTCATAATACTAAGGGACCCTCCTCCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTAGTGAGCCATATGATCTTCATAATACTAAGGGACCCTCCTCCCA  900

seq1  TTGATGGCCGACTATGACATCCTCTGATACCTATGCAACTAGAGACACAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGCCGACTATGACATCCTCTGATACCTATGCAACTAGAGACACAG  950

seq1  TTGGGGGGGGGGGTTAT  967
      |||||||||||||||||
seq2  TTGGGGGGGGGGGTTAT  967