BAC Information

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BAC

Clone NameB6Ng01-112M01
Chromosome17 (Build37)
Map Location 66,620,182 - 66,693,563
singlet/doubletdoublet
Overlap gene1110012J17Rik
Upstream geneE130009J12Rik, LOC668655, LOC674701, Vapa, Txndc2, Rab31, Ppp4r1, Ralbp1, LOC100043873, LOC100043592, Twsg1, Ankrd12, 5430411C19Rik, Ndufv2, ORF19, Ddx11, LOC100043599, LOC100043875
Downstream geneLOC100043876, Rab12, 9130404H23Rik, Ptprm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112M01.bB6Ng01-112M01.g
ACCDH918734DH918735
length7141,147
definitionDH918734|Mus musculus domesticus DNA, BAC clone: B6Ng01-112M01, 5' end.DH918735|Mus musculus domesticus DNA, BAC clone: B6Ng01-112M01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,692,850 - 66,693,563)(66,620,182 - 66,621,325)
sequence
gaattccatagcaacgactgggattacgcatcccccagggctgaggccga
tcggcctccagacccctgggcagacaggaccgagatggggagggtggggc
atgaagccaccacagagccttgtccggatccctcctggtatctgaccaca
agtgtcacgatgacgacagacaccatgaccagtccggagcactgccagaa
gcagccactgcggacccatgtcctcactgagcagtctggtgtgcacgtgc
tgcacagcccgcctgccattcgccgggttgacagtatagcatcaggcggc
gagggcaggagccgagcggaccccgagggcccctttcctatgagcagagc
aagagggaacctggcagatgccaaggggggtcatccagaacctgtgctca
acaggtggccttgcacgccacccagacatccccgggactgtgtggagggg
tctcttcgccccctcgacagacctatctgcccctccctgggatttgcctc
ccctctgaacagcctagatatgtctaagaacatgagtgatgacatgaagg
aggtggctttttctgtcaggaatgccatctgcgccggtcctgccgagcca
cacgtcagggatatggcctgccagaccaatgggtccaggacagcagggac
gcagaccatccagacaatcagcgtgggcctgcagaccgaggccctacgtg
ccaactgcgtcacc
gaattctttgctctgtgagttcatgctgggcactgcaggggctttggagc
ctctctgaccttctccactccatactcaaagtactacaatggctcacctg
ccatgcttaagacgggagagccaaaactgtcttcagatgttgctaataat
tgcccatgtggggcaaaatcgcccacccattgtttatttgagaatccatg
tcttaccatcatcagattggttgattttgcgtttacagtatgaataatgt
gttgttttgttatttttcccaaagcagaggggatgagcgaaccggctggg
aagaccacatttcagatgttctgaaaggcatgagtgcttcaagaaggaat
gaacatcactgaattaaaagatagaagccaggggctggagagatggctca
gcggttaagagcactgactgctcttccaaaggttctgagttcaaatccca
gcaaccacatggtggctcacaaccatccataatgagatctgacgccctct
tctggggtgtctgaaaacagctacggtgtacttacatctaacaaataaat
aaatcttaaaaagaaaaaatagaagccaagagatgtccttctggcaggtg
gtctgtggcttacaggcagctttggagtttcagtgccttgaggtgataag
gtctgactgggaagacattggtgtaaaaaaaagaggtggtgtttgcttgg
agcacccatgtttggcaccatgggtaatgtgccctaggtgtagtgtccct
tataggaggaccctctgggcaataattttattcatccactcattttcatt
cattcattcattcattcattcattcattcactggccctctgccatgcacc
aggagctggctgttctgggtgaagaaaaggatgctgtaattccttctcta
ggggactcactagtgggaaggagacaaggttgtcacagccattgtaacag
catctatagaaggtccagtgctcactggacacaagctcatgattgctata
ggaaatcgttaggaacatctactgaggctcggtgctccactgcaacgcgc
tcagaatgcacaaccgggaataaccgccccaaggtttctggtgttccttg
aaaacacttctgaattgtttcggcttccaatgaaggtgctcagaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_66692850_66693563
seq2: B6Ng01-112M01.b_49_762 (reverse)

seq1  GGTGACGCCGCTGGCACGTAGGGCCTCGGTCTGCAGGCCCACGCTGATTG  50
      |||||||| | |||||||||||||||||||||||||||||||||||||||
seq2  GGTGACGCAGTTGGCACGTAGGGCCTCGGTCTGCAGGCCCACGCTGATTG  50

seq1  TCTGGATGGTCTGCGTCCCTGCTGTCCTGGACCCATTGGTCTGGCAGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATGGTCTGCGTCCCTGCTGTCCTGGACCCATTGGTCTGGCAGGCC  100

seq1  ATATCCCTGACGTGTGGCTCGGCAGGACCGGCGCAGATGGCATTCCTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCCTGACGTGTGGCTCGGCAGGACCGGCGCAGATGGCATTCCTGAC  150

seq1  AGAAAAAGCCACCTCCTTCATGTCATCACTCATGTTCTTAGACATATCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGCCACCTCCTTCATGTCATCACTCATGTTCTTAGACATATCTA  200

seq1  GGCTGTTCAGAGGGGAGGCAAATCCCAGGGAGGGGCAGATAGGTCTGTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTCAGAGGGGAGGCAAATCCCAGGGAGGGGCAGATAGGTCTGTCG  250

seq1  AGGGGGCGAAGAGACCCCTCCACACAGTCCCGGGGATGTCTGGGTGGCGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGCGAAGAGACCCCTCCACACAGTCCCGGGGATGTCTGGGTGGCGT  300

seq1  GCAAGGCCACCTGTTGAGCACAGGTTCTGGATGACCCCCCTTGGCATCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGCCACCTGTTGAGCACAGGTTCTGGATGACCCCCCTTGGCATCTG  350

seq1  CCAGGTTCCCTCTTGCTCTGCTCATAGGAAAGGGGCCCTCGGGGTCCGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTCCCTCTTGCTCTGCTCATAGGAAAGGGGCCCTCGGGGTCCGCT  400

seq1  CGGCTCCTGCCCTCGCCGCCTGATGCTATACTGTCAACCCGGCGAATGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTCCTGCCCTCGCCGCCTGATGCTATACTGTCAACCCGGCGAATGGC  450

seq1  AGGCGGGCTGTGCAGCACGTGCACACCAGACTGCTCAGTGAGGACATGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGGGCTGTGCAGCACGTGCACACCAGACTGCTCAGTGAGGACATGGG  500

seq1  TCCGCAGTGGCTGCTTCTGGCAGTGCTCCGGACTGGTCATGGTGTCTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCAGTGGCTGCTTCTGGCAGTGCTCCGGACTGGTCATGGTGTCTGTC  550

seq1  GTCATCGTGACACTTGTGGTCAGATACCAGGAGGGATCCGGACAAGGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCGTGACACTTGTGGTCAGATACCAGGAGGGATCCGGACAAGGCTC  600

seq1  TGTGGTGGCTTCATGCCCCACCCTCCCCATCTCGGTCCTGTCTGCCCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGGCTTCATGCCCCACCCTCCCCATCTCGGTCCTGTCTGCCCAGG  650

seq1  GGTCTGGAGGCCGATCGGCCTCAGCCCTGGGGGATGCGTAATCCCAGTCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGGAGGCCGATCGGCCTCAGCCCTGGGGGATGCGTAATCCCAGTCG  700

seq1  TTGCTATGGAATTC  714
      ||||||||||||||
seq2  TTGCTATGGAATTC  714

seq1: chr17_66620182_66621325
seq2: B6Ng01-112M01.g_66_1212

seq1  GAATTCTTTGCTCTGTGAGTTCATGCTGGGCACTGCAGGGGCTTTGGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCTCTGTGAGTTCATGCTGGGCACTGCAGGGGCTTTGGAGC  50

seq1  CTCTCTGACCTTCTCCACTCCATACTCAAAGTACTACAATGGCTCACCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGACCTTCTCCACTCCATACTCAAAGTACTACAATGGCTCACCTG  100

seq1  CCATGCTTAAGACGGGAGAGCCAAAACTGTCTTCAGATGTTGCTAATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTTAAGACGGGAGAGCCAAAACTGTCTTCAGATGTTGCTAATAAT  150

seq1  TGCCCATGTGGGGCAAAATCGCCCACCCATTGTTTATTTGAGAATCCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATGTGGGGCAAAATCGCCCACCCATTGTTTATTTGAGAATCCATG  200

seq1  TCTTACCATCATCAGATTGGTTGATTTTGCGTTTACAGTATGAATAATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCATCATCAGATTGGTTGATTTTGCGTTTACAGTATGAATAATGT  250

seq1  GTTGTTTTGTTATTTTTCCCAAAGCAGAGGGGATGAGCGAACCGGCTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTTGTTATTTTTCCCAAAGCAGAGGGGATGAGCGAACCGGCTGGG  300

seq1  AAGACCACATTTCAGATGTTCTGAAAGGCATGAGTGCTTCAAGAAGGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCACATTTCAGATGTTCTGAAAGGCATGAGTGCTTCAAGAAGGAAT  350

seq1  GAACATCACTGAATTAAAAGATAGAAGCCAGGGGCTGGAGAGATGGCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATCACTGAATTAAAAGATAGAAGCCAGGGGCTGGAGAGATGGCTCA  400

seq1  GCGGTTAAGAGCACTGACTGCTCTTCCAAAGGTTCTGAGTTCAAATCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTTAAGAGCACTGACTGCTCTTCCAAAGGTTCTGAGTTCAAATCCCA  450

seq1  GCAACCACATGGTGGCTCACAACCATCCATAATGAGATCTGACGCCCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCACATGGTGGCTCACAACCATCCATAATGAGATCTGACGCCCTCT  500

seq1  TCTGGGGTGTCTGAAAACAGCTACGGTGTACTTACATCTAACAAATAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGTGTCTGAAAACAGCTACGGTGTACTTACATCTAACAAATAAAT  550

seq1  AAATCTTAAAAAGAAAAAATAGAAGCCAAGAGATGTCCTTCTGGCAGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTAAAAAGAAAAAATAGAAGCCAAGAGATGTCCTTCTGGCAGGTG  600

seq1  GTCTGTGGCTTACAGGCAGCTTTGGAGTTTCAGTGCCTTGAGGTGATAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGGCTTACAGGCAGCTTTGGAGTTTCAGTGCCTTGAGGTGATAAG  650

seq1  GTCTGACTGGGAAGACATTGGTGTAAAAAAAAGAGGTGGTGTTTGCTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGACTGGGAAGACATTGGTGTAAAAAAAAGAGGTGGTGTTTGCTTGG  700

seq1  AGCACCCATGTTTGGCACCATGGGTAATGTGCCCTAGGTGTAGTGTCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCCATGTTTGGCACCATGGGTAATGTGCCCTAGGTGTAGTGTCCCT  750

seq1  TATAGGAGGACCCTCTGGGCAATAATTTTATTCATCCACTCATTTTCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGAGGACCCTCTGGGCAATAATTTTATTCATCCACTCATTTTCATT  800

seq1  CATTCATTCATTCATTCATTCATTCATTCACTGGCCCTCTGCCATGCACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATTCATTCATTCATTCATTCATTCACTGGCCCTCTGCCATGCACC  850

seq1  AGGAGCTGGCTGTTCTGGGTGAAGAAAAGGATGCTGTAATTCCTTCTCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTGGCTGTTCTGGGTGAAGAAAAGGATGCTGTAATTCCTTCTCTA  900

seq1  GGGGACTCACTAGTGGGAAGGAGACAAGGTTGTCACAGCCATTGTAACAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACTCACTAGTGGGAAGGAGACAAGGTTGTCACAGCCATTGTAACAG  950

seq1  CATCTATAG-AGGTCCAGTGCTCACTGGACAC-AGCTCATGATTGCTATA  998
      ||||||||| |||||||||||||||||||||| |||||||||||||||||
seq2  CATCTATAGAAGGTCCAGTGCTCACTGGACACAAGCTCATGATTGCTATA  1000

seq1  -GACATCG-TAAGAACATCTACTGAGGCTCGGTGCT-CACTGC-ACGCGG  1044
       || |||| || |||||||||||||||||||||||| |||||| |||| |
seq2  GGAAATCGTTAGGAACATCTACTGAGGCTCGGTGCTCCACTGCAACGC-G  1049

seq1  CTCAGGATGTCACAACCGGG-ATAACCGCACCACGGTGTTTCT-GTGTTC  1092
      ||||| ||| |||||||||| |||||||| ||| |  |||||| ||||||
seq2  CTCAGAATG-CACAACCGGGAATAACCGCCCCAAG--GTTTCTGGTGTTC  1096

seq1  CTTGAACACAGCTCCTG-ATTGTTCTGCTTTCCACATGAGGGTGCTCAGA  1141
      |||||| ||| || ||| ||||||  |  ||||| |||| ||||||||||
seq2  CTTGAAAACA-CTTCTGAATTGTTTCGGCTTCCA-ATGAAGGTGCTCAGA  1144

seq1  AGA  1144
      |||
seq2  AGA  1147