BAC Information

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BAC

Clone NameB6Ng01-112N03
Chromosome17 (Build37)
Map Location 59,067,930 - 59,178,101
singlet/doubletdoublet
Overlap gene2610034M16Rik, Nudt12, 4930505H01Rik
Upstream geneCntnap5c, LOC620408, EG545216, LOC668648
Downstream geneLOC100043537, LOC100043542
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112N03.bB6Ng01-112N03.g
ACCDH918781DH918782
length1,102168
definitionDH918781|Mus musculus domesticus DNA, BAC clone: B6Ng01-112N03, 5' end.DH918782|Mus musculus domesticus DNA, BAC clone: B6Ng01-112N03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,067,930 - 59,069,041)(59,177,933 - 59,178,101)
sequence
gaattctttagctcaatatacaactgatagaattagtagagactttaaat
cgatttcttcacacctgttttctatgcttacgatgaagctattctgcttt
atatttcttcttggcaatgtgttttatctgtgattattttagatagtctc
tccaaagtcatgaatgccaataaccctctgccatttacttacattaagta
atccttttcctggatattgtagtttgagtttctttaatattttgaggatg
ttaactatagtactttggaatctgctcttgtttaaaactctggttgcatt
tcacatcttttagaggtgatgcactattttcttctggatggttagataat
ttttttttatgtttaatttcttaagtttcactacagagtgcctgcctaag
ggtttttacacccatttatttcataatatgtaagcatttaaaaaaattct
ctttatttcatgaatcctgaaaacattttgttttgtttcttatacgtttt
tccccatgggctagggaaatatctttgttgctaaagtgctttctgaagca
caagaacccaagtagatctccagaaactgtattttacgagtctcatgctc
tacacactgagctagctggtcaaccagaaactgaagtttaaaaaccatgc
atggcggcatgtgcttaggattccaaaactgtacaagtggggaccagaaa
atgtcttgaatttactggccagtcaaccttgtgggtcagtgattttcatg
ccactaggagagccagcctcacaaaacaaagggaagagcacccttggcat
gacacctgaagttgatctctggcttcttcatgcataagtacatatccaca
cttgccttagtcagggttttctattcccgtacaaacctcatgaccaagaa
gcaagttggggggtgaaagatttattcagattacacttcacagtgctgtt
cattaccaaaggaagtcaggactagaactcagtggggtcaggaaccagag
ctgacaagttgccatggagggatgttacttactggctgcttcctgcttgg
ctcatctgcttcctatagaccccgactatcagcagggatggcaccttcct
ca
tcttgatagataattgatgtggaaaagcccagctaactctgggccatggc
acccctgtgctgatagtctcgcaactataagaaatctgacaaggggagac
atggggagtagagagacagaaatagacacaaagaaatacaggtgtgtgtg
gcgtggggggggggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_59067930_59069041
seq2: B6Ng01-112N03.b_46_1147

seq1  GAATTCTTTAGCTCAATATACAACTGATAGAATTAGTAGAGACTTTAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGCTCAATATACAACTGATAGAATTAGTAGAGACTTTAAAT  50

seq1  CGATTTCTTCACACCTGTTTTCTATGCTTACGATGAAGCTATTCTGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTTCTTCACACCTGTTTTCTATGCTTACGATGAAGCTATTCTGCTTT  100

seq1  ATATTTCTTCTTGGCAATGTGTTTTATCTGTGATTATTTTAGATAGTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCTTCTTGGCAATGTGTTTTATCTGTGATTATTTTAGATAGTCTC  150

seq1  TCCAAAGTCATGAATGCCAATAACCCTCTGCCATTTACTTACATTAAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGTCATGAATGCCAATAACCCTCTGCCATTTACTTACATTAAGTA  200

seq1  ATCCTTTTCCTGGATATTGTAGTTTGAGTTTCTTTAATATTTTGAGGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTTCCTGGATATTGTAGTTTGAGTTTCTTTAATATTTTGAGGATG  250

seq1  TTAACTATAGTACTTTGGAATCTGCTCTTGTTTAAAACTCTGGTTGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTATAGTACTTTGGAATCTGCTCTTGTTTAAAACTCTGGTTGCATT  300

seq1  TCACATCTTTTAGAGGTGATGCACTATTTTCTTCTGGATGGTTAGATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCTTTTAGAGGTGATGCACTATTTTCTTCTGGATGGTTAGATAAT  350

seq1  TTTTTTTTATGTTTAATTTCTTAAGTTTCACTACAGAGTGCCTGCCTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTATGTTTAATTTCTTAAGTTTCACTACAGAGTGCCTGCCTAAG  400

seq1  GGTTTTTACACCCATTTATTTCATAATATGTAAGCATTTAAAAAAATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTACACCCATTTATTTCATAATATGTAAGCATTTAAAAAAATTCT  450

seq1  CTTTATTTCATGAATCCTGAAAACATTTTGTTTTGTTTCTTATACGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTCATGAATCCTGAAAACATTTTGTTTTGTTTCTTATACGTTTT  500

seq1  TCCCCATGGGCTAGGGAAATATCTTTGTTGCTAAAGTGCTTTCTGAAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATGGGCTAGGGAAATATCTTTGTTGCTAAAGTGCTTTCTGAAGCA  550

seq1  CAAGAACCCAAGTAGATCTCCAGAAACTGTATTTTACGAGTCTCATGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACCCAAGTAGATCTCCAGAAACTGTATTTTACGAGTCTCATGCTC  600

seq1  TACACACTGAGCTAGCTGGTCAACCAGAAACTGAAGTTTAAAAACCATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACTGAGCTAGCTGGTCAACCAGAAACTGAAGTTTAAAAACCATGC  650

seq1  ATGGCGGCATGTGCTTAGGATTCCAAAACTGTACAAGTGGGGACCAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCGGCATGTGCTTAGGATTCCAAAACTGTACAAGTGGGGACCAGAAA  700

seq1  ATGTCTTGAATTTACTGGCCAGTCAACCTTGTGGGTCAGTGATTTTCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTGAATTTACTGGCCAGTCAACCTTGTGGGTCAGTGATTTTCATG  750

seq1  CCACTAGGAGAGCCAGCCTCACAAAACAAAGGGAAGAGCACCCTTGGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAGGAGAGCCAGCCTCACAAAACAAAGGGAAGAGCACCCTTGGCAT  800

seq1  GACACCTGAAGTTGATCTCTGGCTTCTTCATGCATAAGTACATATCCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCTGAAGTTGATCTCTGGCTTCTTCATGCATAAGTACATATCCACA  850

seq1  C-TGCCTTAGTCAGGG-TTTCTATTCCCGTACAAACCTCATGACCAAGAA  898
      | |||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTTGCCTTAGTCAGGGTTTTCTATTCCCGTACAAACCTCATGACCAAGAA  900

seq1  GCAAGTTGGGGGTGAAAAGATTTATTCAGATTACACTTCCACAGTGCTGT  948
      ||||||||||||   ||||||||||||||||||||||| |||||||||||
seq2  GCAAGTTGGGGGGTGAAAGATTTATTCAGATTACACTT-CACAGTGCTGT  949

seq1  TCATTACCAAAGGAAGTCAGGACTAGAACTCAAGTGGGTCAGGAACCAGG  998
      ||||||||||||||||||||||||||||||||   ||||||||||||| |
seq2  TCATTACCAAAGGAAGTCAGGACTAGAACTCAGTGGGGTCAGGAACCA-G  998

seq1  AGCTGACACAGTTGCCATGGAGGGATGTTACTTACTGGCTTGCTTCCCCT  1048
      |||||||| |||||||||||||||||||||||||||||| |||||  |||
seq2  AGCTGACA-AGTTGCCATGGAGGGATGTTACTTACTGGC-TGCTT--CCT  1044

seq1  GGCTTGCTCATCTTGCTTCCTTATAGAACCCCAGACTATCAGCCAAGGGA  1098
      |  | ||||||| ||||||| ||||||  ||| ||||||||||  |||||
seq2  GCTTGGCTCATC-TGCTTCC-TATAGA--CCCCGACTATCAGC--AGGGA  1088

seq1  TGGCACCTCCCTCA  1112
      |||||||| |||||
seq2  TGGCACCTTCCTCA  1102

seq1: chr17_59177933_59178101
seq2: B6Ng01-112N03.g_74_241 (reverse)

seq1  TCCCCCCCCCCCCCCACGCCACACACACCTGTATTTCTTTGTGTCTATTT  50
        ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TCCCCCCCCCCCCCACGCCACACACACCTGTATTTCTTTGTGTCTATTT  49

seq1  CTGTCTCTCTACTCCCCATGTCTCCCCTTGTCAGATTTCTTATAGTTGCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTCTACTCCCCATGTCTCCCCTTGTCAGATTTCTTATAGTTGCG  99

seq1  AGACTATCAGCACAGGGGTGCCATGGCCCAGAGTTAGCTGGGCTTTTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATCAGCACAGGGGTGCCATGGCCCAGAGTTAGCTGGGCTTTTCCA  149

seq1  CATCAATTATCTATCAAGA  169
      |||||||||||||||||||
seq2  CATCAATTATCTATCAAGA  168