BAC Information

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BAC

Clone NameB6Ng01-113G06
Chromosome17 (Build37)
Map Location 39,984,943 - 39,985,284
singlet/doubletsinglet
Overlap geneLOC672857
Upstream geneLOC100043297, LOC100043300, EG668200, LOC627695
Downstream geneLOC634967, Pgk2, Crisp3, Crisp1, LOC668229, LOC100043756, EG433107, EG619517, Crisp2, Rhag
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113G06.bB6Ng01-113G06.g
ACCDH919199DH919200
length211363
definitionDH919199|Mus musculus domesticus DNA, BAC clone: B6Ng01-113G06, 5' end.DH919200|Mus musculus domesticus DNA, BAC clone: B6Ng01-113G06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
acagggaaatcatcactcagggacttcaggtagaaaactagccagtcagc
ctctggatagacaaggctcaacagttcagagaaccaggccatcgcaaata
gttcacagacctgcaaggaagacatgcagatccctgccccccaccccacc
cctcccccagccccacccaaacatagggagaaaaggcagtgtgggggagg
gggaggtgctg
ccagtaagtgcgggtcataagcttgcgttgattaagtccctgccctttgt
acacaccgcccgtcgctactaccgattggatggtttagtgaggccctcgg
atcggccccgccggggtcggcccacggccctggcggagcgctgagaagac
ggtcgaacttgactatctagaggaagtaaaagtcgtaacaaggtttccgt
aggtgaacctgcggaaggatcattaacgggagactgtggaggagcggcgg
cgtggctcgctctccctgtcttgtgtgtatcctcgccgggaggcgcgtgc
gtcccgggtcccgtcgcccgcgtgtggagcgaggtgtctggagtgaggtg
agagaaggggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_39984943_39985284
seq2: B6Ng01-113G06.g_68_436

seq1  GAATTCCCAGTAAGTGCGGGCCATAAGCTTGCGTTGATTAAGTCCCTGCC  50
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAATTCCCAGTAAGTGCGGGTCATAAGCTTGCGTTGATTAAGTCCCTGCC  50

seq1  CTTTGTACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGA---  97
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  CTTTGTACACACCGCCCGTCGCTACTACCGATTGGATGGTTTAGTGAGGC  100

seq1  ------------------------GGCCCACGGCCCTGGTGGAGCGCTGA  123
                              ||||||||||||||| ||||||||||
seq2  CCTCGGATCGGCCCCGCCGGGGTCGGCCCACGGCCCTGGCGGAGCGCTGA  150

seq1  GAAGACGGTCGAACTTGACTATCTAGAGGAAGTAAAAGTCGTAACAAGGT  173
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACGGTCGAACTTGACTATCTAGAGGAAGTAAAAGTCGTAACAAGGT  200

seq1  TTCCGTAGGTGAACCTGCGGAAGGATCATTAACGGGAGACTGTGGAGGAG  223
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGTAGGTGAACCTGCGGAAGGATCATTAACGGGAGACTGTGGAGGAG  250

seq1  CGGCGGCGTGGCTCGCTCTCCCCGTCTTGTGTGTGTCCTCGCCGGGAGGC  273
      |||||||||||||||||||||| ||||||||||| |||||||||||||||
seq2  CGGCGGCGTGGCTCGCTCTCCCTGTCTTGTGTGTATCCTCGCCGGGAGGC  300

seq1  GCGTGCGTCCCGGGTCCCGTCGCCCGCGTGTGGAGCGAGGTGTCTGGAGT  323
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGCGTCCCGGGTCCCGTCGCCCGCGTGTGGAGCGAGGTGTCTGGAGT  350

seq1  GAGGTGAGAGAAGGGGTGG  342
      |||||||||||||||||||
seq2  GAGGTGAGAGAAGGGGTGG  369