BAC Information

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BAC

Clone NameB6Ng01-113M10
Chromosome17 (Build37)
Map Location 89,533,230 - 89,533,278
singlet/doubletsinglet
Overlap geneFshr
Upstream geneFoxn2, Ccdc128, LOC668866, Gtf2a1lf, Lhcgr, LOC668867
Downstream geneLOC100043904, LOC100043906, Nrxn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113M10.bB6Ng01-113M10.g
ACCDH919482DH919483
length1,0171,246
definitionDH919482|Mus musculus domesticus DNA, BAC clone: B6Ng01-113M10, 5' end.DH919483|Mus musculus domesticus DNA, BAC clone: B6Ng01-113M10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgaggattgggatctgcccggcgtgggagcgctttgcctgagca
tcagcagcagacatcttggttctgggatcctgccgagtgtatcctgcaca
ggcaggtgaccattttcctggccagaggatagggacctgaccggcgctgg
agcgctatgcctgagcactggcagcagacatcttagtgccgggaccctgc
caagtgtatcctgcacagacatcttggtttcaggaccccgccgagtgtat
ccttcacagctccagagaataccagagggcgaaaggaaaacgtaagaatc
ctactaacagaaatcaagaccactcaccatcatcagaacgcagcactccc
atgccacctagtcctgggcaccacaacacaaccgaaaagctagacccaga
tttaaaagcatatctcatgttgatggtagaggacatcaagaagaacttta
ataactcacttaaagaaatacaggagaacactgctaaagagttacaagtc
cttaaagaaaaacaggaaaacacaaccaaacaggtagaagtccttataga
aaaacaggaaaacacatccaaacaggtgatggaaatgaacaagaccatac
tagacctaaaaagggaagtagacacaataaagaaaacccaaagcaaggca
atgctggagatagaaaacctaggaaaaaatctggaaccatagacgcgagc
atcagcaacagaatacaagagatggaagagagaatctcaggtgcagaaga
ttccatagagaacatcgacacaacagtcaaagaaaatacaaaatgcaaaa
tgatcctaactcaaaacatccaggaaatccaggacacagtgagaagacca
aacctatggataatagaagttgatgagaatgaagattttcaacttaaagg
gccagcaatatattcacaaaattatagaagaaaacttcccaaacctaaag
aatgacatgcccatgaacatacaagaagcctacagaactccaaatagact
ggaccagaaaaagaaat
gaattcttaagtgaggaatatcgggctgagaagcacctaaaaaaaatgtt
caacatcctttttcatcagggaaatacaaatcatgctcatggattggcag
gatcaatatagtaaaaatggctacttgccaaaagcaatctacagattcaa
tgcaatccccatcaaaattccaactcaattcttcaacgaattaggaaggg
aaatctgcaaattcatatggaataacaaaaaacctaggatagcaaaaact
cttctcaaggataaaagaacctctggtggaaatacaaatcaaaacaatac
taagattacatttcacaccagtcagaatggctaagataaaaatctcaggt
gacagcaaatgcaggcaaggatgtggagaaagtagaacactcctccattg
ctggtgggagtacaagctagtacaacaaatctggaaatcaatctggcagt
tcctcagaaaattggacatagttctaccagaagatccagcaattcctctc
ctgggcatatactcagaaaatgctccaaattttaataaggacacatgttc
cactatgttcatagcagccttatatataatagccagaagctggaaaaaac
ttagtgtccctcaacaaaggaatgtatacagaaaatgtggtacatttaca
aaatggagtactatgcagctattaaaaacaaggaattcatgaaattttta
gaggaatggatagatctggaggatatcatcatgattgtggtaacccaatc
acaaaaagacacatgtgatatgcacccactgataagtgaatattagccca
gaagctcagaatactcaagatacaatttgcaaaacacatgaaactcaaga
agaaggaagacaaaatgtggacacatcaatccttcttagaagggtgaaca
aaatacccatggaaggagttacagagacaaagtgtggagcagagactgaa
gagtgaccatccagaaactgcctcacctgagatccatcccataaacacac
aaacgcgaatactattgcagatgcacagtgcttgctgacaggagactggt
ataactgtctactggaaagctcttcctagtacctggactgatataaaagt
ggatgctcccaggtcttccattagatagagcacaaagcccattggaagaa
cgctaaggaaagaacctttagctgcaggttgcagctcctaggagaaaaca
attgaatacacagttaacccccaagacctctctgtgggctataatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_89533230_89533278
seq2: B6Ng01-113M10.b_50_299

seq1  GAATTCTGAGGATTGGGATCTGCCCTGCACGGGACCCC---GCCGAGTGT  47
      ||||||||||||||||||||||||| ||  |||| | |   |||  | | 
seq2  GAATTCTGAGGATTGGGATCTGCCCGGCGTGGGAGCGCTTTGCC-TGAGC  49

seq1  AT------------------------------------------------  49
      ||                                                
seq2  ATCAGCAGCAGACATCTTGGTTCTGGGATCCTGCCGAGTGTATCCTGCAC  99

seq1  --------------------------------------------------  49
                                                        
seq2  AGGCAGGTGACCATTTTCCTGGCCAGAGGATAGGGACCTGACCGGCGCTG  149

seq1  --------------------------------------------------  49
                                                        
seq2  GAGCGCTATGCCTGAGCACTGGCAGCAGACATCTTAGTGCCGGGACCCTG  199

seq1  --------------------------------------------------  49
                                                        
seq2  CCAAGTGTATCCTGCACAGACATCTTGGTTTCAGGACCCCGCCGAGTGTA  249

seq1  -  49
       
seq2  T  250