BAC Information

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BAC

Clone NameB6Ng01-115D11
Chromosome17 (Build37)
Map Location 90,306,886 - 90,307,403
singlet/doubletsinglet
Overlap genenone
Upstream geneFshr, LOC100043904
Downstream geneLOC100043906, Nrxn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115D11.bB6Ng01-115D11.g
ACCDH920538DH920539
length1,2521,010
definitionDH920538|Mus musculus domesticus DNA, BAC clone: B6Ng01-115D11, 5' end.DH920539|Mus musculus domesticus DNA, BAC clone: B6Ng01-115D11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttctaagatttttaacatgaaggggtgttgtattttc
ttaaaggcttttcagcatctaatgagatgatctagtggcttttttctttg
agtttctttatataaatcaaacaaaacagtagccatcctctactaaaagg
acaaaaggtctgataaagaaattaggaaatgactccttcacaatagtcat
aaatcatataaaatatcttggagtgactctaaacaagcaagtgaaagatc
tgtacaacaacaacttcaagtctctaaggaaagatatcgaagaagacctc
agaagatggtaaaatctcccaggctcaggcactggcagaatttatatagt
aaaaatggccatcttgtcaaaagcaatctacatattcattgcaatctgca
tcaaaattccaacttaattcttcagagagatagatagagcaattctcaaa
ttcacctggactaacactaaagcaaaacaaaacaaaatgaaaccaggaaa
acagaaagtatcctcaactataagagaatttctgggggaatcaccatccc
tgacctcaatctatcttacagagcaattgtgataaaaaacaaaaataaaa
acaaaacaaaaacaaacaaacaaacaaaaaactagatagtattggtacag
agacaggaagatggatcaatgggatagaattgaagacccagaattaaacc
cacacacctgatctttaacaaagaagccaaaaccattcagtggaaaaaaa
ctgcatatataacaaatggttctggttcaagtggcagttggcatgtagaa
caacacagattgatccactcctatatctgtgtacaaagctcaagtctaag
tggatcaaggatctccacataaaaccagatctgctgaatctaatagcaga
gaaagtgggaaagaacctctaacacattgacacaaggaaaattgctacat
ccactccagtagtgacacacatgacaggtccaaaaacctggatgcagtcc
caaagcaaaaggttcatggaaactgagtctctggaaatttgaaattccca
tagctagaatgcccagaatgtcctgcaataagtgtggagggtcttgcatg
cctttctacggtatttactggataaaagtagaatctccagtgcagctagc
aaggtatactagatcttcattatatgggcgactaggactatagtagaagt
ctccatcctggaactatagatatgcctgagattaaactctcttaatacca
gg
gaattcagtgaattttccaccaagattaataatccagtacagttatcctt
cataatcaaaacaaaaataaaaactttccaggatcaacaaaactgaagga
atttagaaacactaggtcagtggtgtaggaaatcctgaacagattcctgt
atacaaaagaaagataaacatatccaggacactgctggaatggaaagtct
ccacagaagagtaaataaaaaaaaatcaataccaaaccttgcaaaacaaa
gcaaaatgataggaatgaaaataaaactttgataatagctctaaatatta
ttggtctaatgtctgcaaagaaaacagactagcagattagatttacaata
ggattggggacttgagatagtgcaatatcttaaggcaaatatctttacct
aaatatatttgtcacaaagcccgagtttgatcctggaactgacatggtag
aaggagagaactaactcttgtaaactgtcctttcgtatgtgtgtaataac
atacaaacttccccatacacaataacctactagtttatttgttttatata
tatatataaaacaagcctatttgatatgtatatccatatacacatacata
tatatcaaaatcaaacctatttgatatatataaaatatatataatcaaat
acacacacacacacacatatatatatatatatatatacattatatatata
taatgtatgtaaagtttagcatagttttagggtaaaagaataggaaaaaa
tgttccatgcaaaaaagaactagcaggtaagtaggtgtaacaattttagt
ttttgaaaaaatattcttcaaactaaattaatcagaagctataaatggta
ttactacacactgattaatggaataacccatcttgtgattgtcgcaatta
taaacataggcatactaaacatcggaggatccaatattatataacaaaca
ctattgaatttaaagtcacagaatgtcccaaataatgactatgagtgact
tcagtactct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_90306886_90307403
seq2: B6Ng01-115D11.g_69_586 (reverse)

seq1  GTATGGGGAAGTTTGTATGTTATTACACACATACGAAAGGACAGTTTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGGGAAGTTTGTATGTTATTACACACATACGAAAGGACAGTTTACA  50

seq1  AGAGTTAGTTCTCTCCTTCTACCATGTCAGTTCCAGGATCAAACTCGGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTAGTTCTCTCCTTCTACCATGTCAGTTCCAGGATCAAACTCGGGC  100

seq1  TTTGTGACAAATATATTTAGGTAAAGATATTTGCCTTAAGATATTGCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGACAAATATATTTAGGTAAAGATATTTGCCTTAAGATATTGCACT  150

seq1  ATCTCAAGTCCCCAATCCTATTGTAAATCTAATCTGCTAGTCTGTTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAAGTCCCCAATCCTATTGTAAATCTAATCTGCTAGTCTGTTTTCT  200

seq1  TTGCAGACATTAGACCAATAATATTTAGAGCTATTATCAAAGTTTTATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGACATTAGACCAATAATATTTAGAGCTATTATCAAAGTTTTATTT  250

seq1  TCATTCCTATCATTTTGCTTTGTTTTGCAAGGTTTGGTATTGATTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCCTATCATTTTGCTTTGTTTTGCAAGGTTTGGTATTGATTTTTTT  300

seq1  TTATTTACTCTTCTGTGGAGACTTTCCATTCCAGCAGTGTCCTGGATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTACTCTTCTGTGGAGACTTTCCATTCCAGCAGTGTCCTGGATATG  350

seq1  TTTATCTTTCTTTTGTATACAGGAATCTGTTCAGGATTTCCTACACCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTTTCTTTTGTATACAGGAATCTGTTCAGGATTTCCTACACCACT  400

seq1  GACCTAGTGTTTCTAAATTCCTTCAGTTTTGTTGATCCTGGAAAGTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAGTGTTTCTAAATTCCTTCAGTTTTGTTGATCCTGGAAAGTTTTT  450

seq1  ATTTTTGTTTTGATTATGAAGGATAACTGTACTGGATTATTAATCTTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTTTTGATTATGAAGGATAACTGTACTGGATTATTAATCTTGGT  500

seq1  GGAAAATTCACTGAATTC  518
      ||||||||||||||||||
seq2  GGAAAATTCACTGAATTC  518