BAC Information

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BAC

Clone NameB6Ng01-117J10
Chromosome17 (Build37)
Map Location 93,867,980 - 93,869,136
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC676141, LOC668877, LOC100043746, LOC100043747, LOC100043748, LOC100043907, Adcyap1, LOC676157, LOC627503
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-117J10.bB6Ng01-117J10.g
ACCDH922290DH922291
length1,2261,127
definitionDH922290|Mus musculus domesticus DNA, BAC clone: B6Ng01-117J10, 5' end.DH922291|Mus musculus domesticus DNA, BAC clone: B6Ng01-117J10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagtacagagctgtaccccatctttaaactggatttgtttggt
ttggtgatgttcagttgtttagttctttatatattttggatattagttct
ctgtcagatgtggagttggtaaaagtccacagaatggttcacattctata
atctgatgttttgtccttgtggtggtttgaatatttatgcccccaaagac
ctatgtgttcgaatgtttgaccatagggagtggaaatatcaggaggtatg
gccatgttagagtaggtgtgactttgttggataaattgtatcaagatgga
ggtgggatttgaggtttccaatgctcaaattccacctagtatgaaagcct
tctgttggctacttttcaggaacaagtcctcttctgctacttgtagatca
agatatagaactcttagctcctctagcaccatgtctgcctagatactgcc
atgcttcctgccacgatgataatggactaaattgaaatggtaagccagct
tcaattaaatgtttgcctttatgagttgctttggtcatgttgtcccttca
cagcaatgaaaccctaagacagtcctattgatagattccttttctttaca
taagcttttaagtttcatgaattccatttatttgttttccattttttatt
aggtatttacttcatttacatttctaattctagcccgaaagtcccctata
ccctccgcacccaactcccctacctacccaatcccacttcttggccctgg
tgttcctctgtactggggtatataaagtttgcaagaccaaagggcctctc
ttcccagtgatggccgattaggccatcttctgctacatatgcagctagag
acacaagctctgagggtgctggttaggatgctcacagtcacctattggat
ggaacacaaggccccaatggagaagctagagaagtacccaaggagctgaa
gggtctgcaaccctatagtggaattccattataactgatgatcttatgcc
tgtactatgagcatcactcatgaaggtgttcctggtgcatttcattcaag
cagtttcgcttttcttcatcagatattgaattggtttatgttgtggcctg
aatccaatgactggactttgggcaggggacaatggattattgatctcatg
acttccattgaaccacatgtggaagcgctccagaatgcgtgataattcgt
gatccagaggcattcatatctgctgc
gaattctctgctctattgtcaattttcagcttctttcttttcttacattg
tacagagtcacaagcaaggaattatctgcagttttcttgtccatgtttgc
ttttctagaagtagatagagatacataaacattctctggaattcagtggc
ttcatgtgttctattttcacagacaaatcttgatacattgtctcttttaa
tacatagtacttattttctaatcaatattaactaacactgttatcaagtg
gtatttactggtactaaaccatatatgccgactgataaaagtggtccaag
tttttaattttctgtgagaacaaatgatccaaagaaataaccacagacac
tttttaaatcactgttccaaaatatctcactttgataaaaggaaaattaa
taatggagcttttccttcatctgtgaagcagtatcaaatatataaaagtt
gttgcataagatacaaatgacatgctctctctagcttattgagaataatt
tgccaacatgatctcaaatcaaccccaaacagtttatctttctgacaaat
gagagatacctttttttctccaacattccaaatgttaacattgataccct
cagaaaccactcacattccccttcttacccaaataatgtctccctccata
gaaggacagaggccagtcaactctgattcagccatctatggtctcagcca
cacttttactgactgttggtcaatttatatttgcccatgtccttatggct
caacactgataatacacttctggcaggaatatcacatttttctcatgtca
acctatctgctaacacttgattttgttttatactataggtgatgatgtaa
tatatattgatcacttgttgtggtggtgtctgccaggcatttctactatt
taaaaaaagtggtttcctattgctttttatgacattaatgaattaatgat
atataggagactttgaaatttaaaagatttctgttgcttacaaactaccc
aaatttcatttagaactatccaaatttgcatgcaatatacatgattttgg
gtcccgattgtgttaatttgatacttattattatatatcattactttaca
cttacatttaatgggaggagggaacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_93867980_93869136
seq2: B6Ng01-117J10.g_67_1193 (reverse)

seq1  TTGTTCCCTCTCTCCATTTATAAATTGGTATAGTTTATAAGTAATTGATA  50
      ||||||||||   ||||   |||||  ||| ||| || |||||| |||||
seq2  TTGTTCCCTCCTCCCAT---TAAAT--GTA-AGTGTA-AAGTAA-TGATA  42

seq1  ATTAATTAATTAATAAAGTATCAAATGTTAACACATTCGGGACACAAAAT  100
        |||     |||| ||||||||||  |||||||| ||||||| ||||||
seq2  TATAA-----TAAT-AAGTATCAAA--TTAACACAATCGGGACCCAAAAT  84

seq1  CATGTATATTGCAATGCAAAATTTTGGATAGTTCTAAATGAAAATTTGGG  150
      |||||||||||| |||||||  |||||||||||||||||| |||||||||
seq2  CATGTATATTGC-ATGCAAA--TTTGGATAGTTCTAAATG-AAATTTGGG  130

seq1  TAGTTTGGTAAGCAACAGAAATCTTTTTAAAATTTCAAAGTTCTCCTATA  200
      |||||| ||||||||||||||||||||  ||||||||||| |||||||| 
seq2  TAGTTT-GTAAGCAACAGAAATCTTTT--AAATTTCAAAG-TCTCCTAT-  175

seq1  ATATTCATTAATTCATTAATGTTCATTAAAAAGCAATAGGAAACCACTTT  250
      ||| ||||||||||||||||| ||| ||||||||||||||||||||| ||
seq2  ATA-TCATTAATTCATTAATG-TCA-TAAAAAGCAATAGGAAACCAC-TT  221

seq1  TTTTTAAATAGTAGAAATGCCTGGCAGACACCACCACAAACAAGTGATCA  300
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTTTAAATAGTAGAAATGCCTGGCAGACACCACCAC-AACAAGTGATCA  270

seq1  ATATATATTACATCATCACCTATAGTATAAAACAAAATCAAGTGTTAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATTACATCATCACCTATAGTATAAAACAAAATCAAGTGTTAGCA  320

seq1  GATAGGTTGACATGAGAAAAATGTGATATTCCTGCCAGAAGTGTATTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGTTGACATGAGAAAAATGTGATATTCCTGCCAGAAGTGTATTATC  370

seq1  AGTGTTGAGCCATAAGGACATGGGCAAATATAAATTGACCAACAGTCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTGAGCCATAAGGACATGGGCAAATATAAATTGACCAACAGTCAGT  420

seq1  AAAAGTGTGGCTGAGACCATAGATGGCTGAATCAGAGTTGACTGGCCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGTGGCTGAGACCATAGATGGCTGAATCAGAGTTGACTGGCCTCT  470

seq1  GTCCTTCTATGGAGGGAGACATTATTTGGGTAAGAAGGGGAATGTGAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCTATGGAGGGAGACATTATTTGGGTAAGAAGGGGAATGTGAGTG  520

seq1  GTTTCTGAGGGTATCAATGTTAACATTTGGAATGTTGGAGAAAAAAAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGAGGGTATCAATGTTAACATTTGGAATGTTGGAGAAAAAAAGGT  570

seq1  ATCTCTCATTTGTCAGAAAGATAAACTGTTTGGGGTTGATTTGAGATCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCATTTGTCAGAAAGATAAACTGTTTGGGGTTGATTTGAGATCAT  620

seq1  GTTGGCAAATTATTCTCAATAAGCTAGAGAGAGCATGTCATTTGTATCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCAAATTATTCTCAATAAGCTAGAGAGAGCATGTCATTTGTATCTT  670

seq1  ATGCAACAACTTTTATATATTTGATACTGCTTCACAGATGAAGGAAAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAACAACTTTTATATATTTGATACTGCTTCACAGATGAAGGAAAAGC  720

seq1  TCCATTATTAATTTTCCTTTTATCAAAGTGAGATATTTTGGAACAGTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTATTAATTTTCCTTTTATCAAAGTGAGATATTTTGGAACAGTGAT  770

seq1  TTAAAAAGTGTCTGTGGTTATTTCTTTGGATCATTTGTTCTCACAGAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGTGTCTGTGGTTATTTCTTTGGATCATTTGTTCTCACAGAAAA  820

seq1  TTAAAAACTTGGACCACTTTTATCAGTCGGCATATATGGTTTAGTACCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAACTTGGACCACTTTTATCAGTCGGCATATATGGTTTAGTACCAG  870

seq1  TAAATACCACTTGATAACAGTGTTAGTTAATATTGATTAGAAAATAAGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACCACTTGATAACAGTGTTAGTTAATATTGATTAGAAAATAAGTA  920

seq1  CTATGTATTAAAAGAGACAATGTATCAAGATTTGTCTGTGAAAATAGAAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTATTAAAAGAGACAATGTATCAAGATTTGTCTGTGAAAATAGAAC  970

seq1  ACATGAAGCCACTGAATTCCAGAGAATGTTTATGTATCTCTATCTACTTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAGCCACTGAATTCCAGAGAATGTTTATGTATCTCTATCTACTTC  1020

seq1  TAGAAAAGCAAACATGGACAAGAAAACTGCAGATAATTCCTTGCTTGTGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGCAAACATGGACAAGAAAACTGCAGATAATTCCTTGCTTGTGA  1070

seq1  CTCTGTACAATGTAAGAAAAGAAAGAAGCTGAAAATTGACAATAGAGCAG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTACAATGTAAGAAAAGAAAGAAGCTGAAAATTGACAATAGAGCAG  1120

seq1  AGAATTC  1157
      |||||||
seq2  AGAATTC  1127