BAC Information

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BAC

Clone NameB6Ng01-120D07
Chromosome17 (Build37)
Map Location 46,070,781 - 46,214,438
singlet/doubletdoublet
Overlap geneVegfa
Upstream geneSupt3h, EG210562, EG668314, Cdc5l, Spats1, EG668319, Aars2, Tcte1, Gm323, Nfkbie, Slc35b2, Hsp90ab1, Slc29a1, EG653016, Capn11, Tmem63b, Mrpl14, LOC100043363
Downstream geneMrps18a, 1700027N10Rik, Mad2l1bp, Gtpbp2, Polh, Xpo5, Rpo1-1, Yipf3, Gm88, Tjap1, Egfl9, Abcc10, BC040756, Zfp318, LOC677168, Crip3, Slc22a7, EG328825, Ttbk1, BC048355, Parc, Srf, Ptk7, Klc4, Mrpl2, Cul7, BC011248, Klhdc3, Mea1, Ppp2r5d, Pex6, Gnmt, Tnrc5, Ptcra, 2310039H08Rik, Rpl7l1, BC032203, A330017A19Rik, Tbcc, Prph2, Ubr2, LOC100043385, EG240110
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120D07.bB6Ng01-120D07.g
ACCDH924209DH924210
length250777
definitionDH924209|Mus musculus domesticus DNA, BAC clone: B6Ng01-120D07, 5' end.DH924210|Mus musculus domesticus DNA, BAC clone: B6Ng01-120D07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,214,189 - 46,214,438)(46,070,781 - 46,071,556)
sequence
caggccagccaagatgacataataaagctctgtcaagaaaaaaaaaaaga
gattcagggagcagaacaggttagtgtccccacagagttagaggcctttg
agcctcacagataaaagggcctggactcaggagacagttccaggcttcag
atcggcactggaaactgtgggcctgttggtggaagcgggacctcttatga
aggtgaacaaggagaccttagtgctaggagggaaggggtggggtgtggat

gaattcccagcctgccctgccccttctactgcttgctacagggttgcaaa
gcaagccccctgaaaggcatttccagaaatgtatctattagcagctggct
gccttacatattcccctggaaagtccttaggggctcagggattgaaggtg
ccttggcagccaccagtagaggctgcagtagggtcataaggaagggtctg
ggggaactgcccagttcctaccaccttatgcaagagagagaacaaagggg
ccttgctgggaggtattataagattaaatggctaggcccaggacaaaccc
agcaagccccttgggatctgaattagtaaggcccactgaaagcaggggaa
ttaacaccctggcttctcacagaggcccacatccccttttatccctgcct
gggcctcctttcgagttaatctgcagccttgcccaagtgcctgcttgggg
cctgtatgaagagccattcctctacccagaggcaaagggagccttcctgg
aaaagaacctacctgacccctgacccctgacctctagagggcacagattg
tgagcaagccgggtggcccagccactcacctggccctttggttgatgttt
gagggcattcactgttccccatcctccaaacttctccttcctgctaatga
ggtaggagtttggggacctgtgagtattagctttgtcaactttgatacaa
tctagaatcatctgggaagagtgtcagtgatggattgtcaacgttatgtt
tacctgtgtgtaagtcagtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_46214189_46214438
seq2: B6Ng01-120D07.b_54_303 (reverse)

seq1  ATCCACACCCCACCCCTTCCCTCCTAGCACTAAGGTCTCCTTGTTCACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACACCCCACCCCTTCCCTCCTAGCACTAAGGTCTCCTTGTTCACCT  50

seq1  TCATAAGAGGTCCCGCTTCCACCAACAGGCCCACAGTTTCCAGTGCCGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGAGGTCCCGCTTCCACCAACAGGCCCACAGTTTCCAGTGCCGAT  100

seq1  CTGAAGCCTGGAACTGTCTCCTGAGTCCAGGCCCTTTTATCTGTGAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCCTGGAACTGTCTCCTGAGTCCAGGCCCTTTTATCTGTGAGGCT  150

seq1  CAAAGGCCTCTAACTCTGTGGGGACACTAACCTGTTCTGCTCCCTGAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCCTCTAACTCTGTGGGGACACTAACCTGTTCTGCTCCCTGAATC  200

seq1  TCTTTTTTTTTTTCTTGACAGAGCTTTATTATGTCATCTTGGCTGGCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTTTTTCTTGACAGAGCTTTATTATGTCATCTTGGCTGGCCTG  250

seq1: chr17_46070781_46071556
seq2: B6Ng01-120D07.g_70_846

seq1  GAATTCCCAGCCTGCCCTGCCCCTTCTACTGCTTGCTACAGGGTTGCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGCCTGCCCTGCCCCTTCTACTGCTTGCTACAGGGTTGCAAA  50

seq1  GCAAGCCCCCTGAAAGGCATTTCCAGAAATGTATCTATTAGCAGCTGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCCCCCTGAAAGGCATTTCCAGAAATGTATCTATTAGCAGCTGGCT  100

seq1  GCCTTACATATTCCCCTGGAAAGTCCTTAGGGGCTCAGGGATTGAAGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTACATATTCCCCTGGAAAGTCCTTAGGGGCTCAGGGATTGAAGGTG  150

seq1  CCTTGGCAGCCACCAGTAGAGGCTGCAGTAGGGTCATAAGGAAGGGTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCAGCCACCAGTAGAGGCTGCAGTAGGGTCATAAGGAAGGGTCTG  200

seq1  GGGGAACTGCCCAGTTCCTACCACCTTATGCAAGAGAGAGAACAAAGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAACTGCCCAGTTCCTACCACCTTATGCAAGAGAGAGAACAAAGGGG  250

seq1  CCTTGCTGGGAGGTATTATAAGATTAAATGGCTAGGCCCAGGACAAACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCTGGGAGGTATTATAAGATTAAATGGCTAGGCCCAGGACAAACCC  300

seq1  AGCAAGCCCCTTGGGATCTGAATTAGTAAGGCCCACTGAAAGCAGGGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCCCCTTGGGATCTGAATTAGTAAGGCCCACTGAAAGCAGGGGAA  350

seq1  TTAACACCCTGGCTTCTCACAGAGGCCCACATCCCCTTTTATCCCTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACCCTGGCTTCTCACAGAGGCCCACATCCCCTTTTATCCCTGCCT  400

seq1  GGGCCTCCTTTCGAGTTAATCTGCAGCCTTGCCCAAGTGCCTGCTTGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCCTTTCGAGTTAATCTGCAGCCTTGCCCAAGTGCCTGCTTGGGG  450

seq1  CCTGTATGAAGAGCCATTCCTCTACCCAGAGGCAAAGGGAGCCTTCCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATGAAGAGCCATTCCTCTACCCAGAGGCAAAGGGAGCCTTCCTGG  500

seq1  AAAAGAACCTACCTGACCCCTGACCCCTGACCTCTAGAGGGCACAGATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACCTACCTGACCCCTGACCCCTGACCTCTAGAGGGCACAGATTG  550

seq1  TGAGCAAGCCGGGTGGCCCAGCCACTCACCTGGCCCTTTGGTTGATGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAAGCCGGGTGGCCCAGCCACTCACCTGGCCCTTTGGTTGATGTTT  600

seq1  GAGGGCATTCACTGTTCCCCATCCTCCAAACTTCTCCTTCCTGCTAATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCATTCACTGTTCCCCATCCTCCAAACTTCTCCTTCCTGCTAATGA  650

seq1  GGTAGGAGTTTGGGGACCTGTGAGTATTAGCTTTGTCAAC-TTGATACAA  699
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGTAGGAGTTTGGGGACCTGTGAGTATTAGCTTTGTCAACTTTGATACAA  700

seq1  TCTAGAATCATCTGGGAAGAGTGTCAGTGATGGATTGTCAACGTTATGTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAATCATCTGGGAAGAGTGTCAGTGATGGATTGTCAACGTTATGTT  750

seq1  TACCTGTGTGTAAGTCAGTGTGTGTGT  776
      |||||||||||||||||||||||||||
seq2  TACCTGTGTGTAAGTCAGTGTGTGTGT  777