BAC Information

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BAC

Clone NameB6Ng01-121I21
Chromosome17 (Build37)
Map Location 14,921,824 - 15,044,567
singlet/doubletdoublet
Overlap geneWdr27
Upstream geneMllt4, LOC100041464, EG635895, EG664821, EG664831, 4930488N24Rik, Dact2, Smoc2, LOC664856, Thbs2, LOC100041236
Downstream geneLOC664893, 1600012H06Rik, Phf10, LOC100041586, LOC100041574, LOC100041289, LOC100041639, LOC100041621, LOC100041301, 9030025P20Rik, Tcte3, C330048F19, LOC664953, Dll1, LOC100041314, 4932442K08Rik, Psmb1, Tbp, Pdcd2, LOC636398, Prdm9, EG626573, LOC665017, LOC100041775, 5830433I10Rik, Chd1, Rgmb, LOC100041365, Eif3s6-ps3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121I21.bB6Ng01-121I21.g
ACCDH925208DH925209
length1,006249
definitionDH925208|Mus musculus domesticus DNA, BAC clone: B6Ng01-121I21, 5' end.DH925209|Mus musculus domesticus DNA, BAC clone: B6Ng01-121I21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,043,991 - 15,044,567)(14,921,824 - 14,922,072)
sequence
gaattctgccttgtccgttgcctgcgctgcctttcagattcaaggaggcg
cagtctaggatgacagcttatgctgtggtgagtggaagatggctgatgag
gagagtattgcagctctgaatgggtcatccacttcttgggaaacctgaac
tctgcttgcattgcccccctgcagcctctgcagctgcggttagggtggag
gcggatgtaaacatccctgctgtcgtctgagaagggtgggtgctattacg
tagctgatagaaaagccacttaagtcaggaggtaggattgtgtagggcag
ggactgagcaagtatgttatcagtgaggatgctcagacgtgccctaaccc
agggcggatgtgagcccgggccggtgtcgcacgtgctctctgcccgtgca
gtcacagtgccatttcctagggctttgactctttgcaagcttgctgagtg
cttgagacgtttgtcagtgttgcctatttatttgtttttaattaaccctt
ttggaattttgtaaaatgtatttgatcatattcctccccccaactcttca
catattcaccccttctttacccaccctgctgctttatgttcttgttttgc
tttgctttgttttgttttgttttaaacccatcagttccaatttgtgttat
ccatgagcttttgtctgtctggccttcactggagtttgacctacgagggc
caggcccttaaagaaagcagactctccctctcccagctggtttgagcttg
cacaagtcttactcatgctgccagaactgctgtgtgtttatatgccaact
gccctgctgtatctggaaaagagttttcttgctctgccatctctggccct
ttcagcctctgtttcttctcctgagccctggagggagtgctctagctgga
tgtcaatgtcccattcagattgagcacttcagtctcttactatgtttgca
tcttcaccagtggtaggtctctgtgtaatcaccgcctgctgaggacgcag
tgaatg
aaggaccatcagcttgcagtgaatgaaccagggtcttacttcatggtcac
attttatacttgactgtagtgatgctttcccccatagacacactcgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctatagcagac
acggatggtattctgagcctgaagcagttataaggctctgtgtgtgcagt
acaatcaagctgtgaacactgggccacctcacatctcttcaggggctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_15043991_15044567
seq2: B6Ng01-121I21.b_48_624 (reverse)

seq1  AGGGTGGGTAAAGAAGGGGTGAATATGTGAAGAGTTGGGGGGAGGAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGGTAAAGAAGGGGTGAATATGTGAAGAGTTGGGGGGAGGAATAT  50

seq1  GATCAAATACATTTTACAAAATTCCAAAAGGGTTAATTAAAAACAAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAATACATTTTACAAAATTCCAAAAGGGTTAATTAAAAACAAATAA  100

seq1  ATAGGCAACACTGACAAACGTCTCAAGCACTCAGCAAGCTTGCAAAGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCAACACTGACAAACGTCTCAAGCACTCAGCAAGCTTGCAAAGAGT  150

seq1  CAAAGCCCTAGGAAATGGCACTGTGACTGCACGGGCAGAGAGCACGTGCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCCTAGGAAATGGCACTGTGACTGCACGGGCAGAGAGCACGTGCG  200

seq1  ACACCGGCCCGGGCTCACATCCGCCCTGGGTTAGGGCACGTCTGAGCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCGGCCCGGGCTCACATCCGCCCTGGGTTAGGGCACGTCTGAGCATC  250

seq1  CTCACTGATAACATACTTGCTCAGTCCCTGCCCTACACAATCCTACCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGATAACATACTTGCTCAGTCCCTGCCCTACACAATCCTACCTCC  300

seq1  TGACTTAAGTGGCTTTTCTATCAGCTACGTAATAGCACCCACCCTTCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAAGTGGCTTTTCTATCAGCTACGTAATAGCACCCACCCTTCTCA  350

seq1  GACGACAGCAGGGATGTTTACATCCGCCTCCACCCTAACCGCAGCTGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGACAGCAGGGATGTTTACATCCGCCTCCACCCTAACCGCAGCTGCAG  400

seq1  AGGCTGCAGGGGGGCAATGCAAGCAGAGTTCAGGTTTCCCAAGAAGTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGCAGGGGGGCAATGCAAGCAGAGTTCAGGTTTCCCAAGAAGTGGA  450

seq1  TGACCCATTCAGAGCTGCAATACTCTCCTCATCAGCCATCTTCCACTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCATTCAGAGCTGCAATACTCTCCTCATCAGCCATCTTCCACTCAC  500

seq1  CACAGCATAAGCTGTCATCCTAGACTGCGCCTCCTTGAATCTGAAAGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCATAAGCTGTCATCCTAGACTGCGCCTCCTTGAATCTGAAAGGCA  550

seq1  GCGCAGGCAACGGACAAGGCAGAATTC  577
      |||||||||||||||||||||||||||
seq2  GCGCAGGCAACGGACAAGGCAGAATTC  577

seq1: chr17_14921824_14922072
seq2: B6Ng01-121I21.g_71_319

seq1  AAGGACCATCAGCTTGCAGTGAATGAACCAGGGTCTTACTTCATGGTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACCATCAGCTTGCAGTGAATGAACCAGGGTCTTACTTCATGGTCAC  50

seq1  ATTTTATACTTGACTGTAGTGATGCTTTCCCCCATAGACACACTCGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATACTTGACTGTAGTGATGCTTTCCCCCATAGACACACTCGTGTG  100

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTATAGCAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTATAGCAGAC  150

seq1  ACGGATGGTATTCTGAGCCTGAAGCAGTTATAAGGCTCTGTGTGTGCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGATGGTATTCTGAGCCTGAAGCAGTTATAAGGCTCTGTGTGTGCAGT  200

seq1  ACAATCAAGCTGTGAACACTGGGCCACCTCACATCTCTTCAGGGGCTCC  249
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCAAGCTGTGAACACTGGGCCACCTCACATCTCTTCAGGGGCTCC  249