BAC Information

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BAC

Clone NameB6Ng01-126A10
Chromosome17 (Build37)
Map Location 37,793,380 - 37,906,760
singlet/doubletdoublet
Overlap geneOlfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121
Upstream geneLOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116
Downstream geneOlfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126A10.bB6Ng01-126A10.g
ACCDH928502DH928503
length9761,075
definitionDH928502|Mus musculus domesticus DNA, BAC clone: B6Ng01-126A10, 5' end.DH928503|Mus musculus domesticus DNA, BAC clone: B6Ng01-126A10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,793,380 - 37,794,361)(37,905,670 - 37,906,760)
sequence
gaattcagaacagaattttcccagacgttcaaaaacctaatgccaatatt
ccttaactcattgcgcaaaaaggaaatggaagaaacatttcctaattctt
ttgttaacccaatattacactactcctaaatccacagagactcctcaaaa
tgagaaaactatgtcctttgtatcccttatctatccaggacttttatcat
gaaaggatattggtttttttttttcaaagagcttttcttcatctagtgag
atgattcggtgggttttatattgtatctgtatacagagtggattctgtta
attgatttatgtatgttgaactatgtctgcatctctgggatgaggccaac
ttgatcaacagtggataattcaatatatatgtcctatttatggttcagtc
tcttctctgcattttcaaaagttatgcatttctctcctcttcctgctgcc
caatgcaaaaaccaaccaaaatcaaaaccaaaccaccagaagctggaaag
aacccagatgtaaggaccaagggcctctccccccattgatgactgaatag
gctatcctctgctacatatgcagctagagccatgagtcctaccatgggtt
tctttgattggtcatttagacccagggagctctggggctactggttatca
taatggtttttttttttttttttttttttttttttttttttttttttttt
tttaaaaggggctgaaaacccccttaacaccttgggtaatgcggatgcca
ataaaaactttctgacaggagcccgataaagctgtctcctgagaaggatc
tgccagtgcctgacaaatcagaagtggatgcccctagccattcattggat
ggagcatggatcctcttgctttttcaatcccatgtttctaaatccccttt
gtccaacaaaaatctggtcaggtctattcacaccattcccactctcagta
caacttcggtcttaagggtttacttc
gaattccacttgagattcataccagaaagttctattttcataatgaccca
tgaaaggagaatggtgtctcatgtactgtatatagacaaatatatgtcca
catacagatatgaaggcttttcagaaagatggaagtatcagaataggctg
aaaaggataagccactgtctcaaatcttaaagtaattttcttcaagtaaa
atttcacattcatcattttgagctgtttcagactaaagctgcaaatactt
tggagcccaatgtgaatacatagtaaaatgttcattgaagtgcaaaagtg
cctgcgctgagaagcctcttgtggaggaagttaggtgcatcatgtggcta
tcctctgcagtcacccatctagtaacagaatgaagccattcacatagagg
tgcaatataatattttacataacgattatgtgttctgtctattacataga
tcttcagtgttataaagattccatgtgtagtaaacactggtcagctttaa
aagattagaaatgtgcattggtggactggattccttattttattctctgt
ctgtctgtctgtctgtctctctctcataaatgtttttttaatcttctgtt
agcagatggaaagcatgaaacactattaattctctttctgaaacgcatca
gtgtctgtgcagaaattctcaggaaaatgttcattatcaccacaatgtag
tcactatttctaaaattctataatagtacacatggtttatgtagattgtt
aggaaaagattatttggatgctcatgccccacaataactcaccaaaggac
catgtgtcaccagctgagtgacactttagcccgacacaatagaaattgtt
agattacttaactagattaatgtgcactatgtaatgagagtctccagtct
cagcattgcattgtgtgatttcccatggacttaagctatttctgagaaag
aaagagccatgatctgagttgactgttacatccctgagatgagataaaat
aaataacagcagacctcaagtgttttgggtgtcagtgtcattttacactt
aggtcactttcctaagtcagtattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37793380_37794361
seq2: B6Ng01-126A10.b_47_1022

seq1  GAATTCAGAACAGAATTTTCCCAGACGTTCAAAAACCTAATGCCAATATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAACAGAATTTTCCCAGACGTTCAAAAACCTAATGCCAATATT  50

seq1  CCTTAACTCATTGCGCAAAAAGGAAATGGAAGAAACATTTCCTAATTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAACTCATTGCGCAAAAAGGAAATGGAAGAAACATTTCCTAATTCTT  100

seq1  TTGTTAACCCAATATTACACTACTCCTAAATCCACAGAGACTCCTCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAACCCAATATTACACTACTCCTAAATCCACAGAGACTCCTCAAAA  150

seq1  TGAGAAAACTATGTCCTTTGTATCCCTTATCTATCCAGGACTTTTATCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAACTATGTCCTTTGTATCCCTTATCTATCCAGGACTTTTATCAT  200

seq1  GAAAGGATATTGGTTTTTTTTTTTCAAAGAGCTTTTCTTCATCTAGTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGATATTGGTTTTTTTTTTTCAAAGAGCTTTTCTTCATCTAGTGAG  250

seq1  ATGATTCGGTGGGTTTTATATTGTATCTGTATACAGAGTGGATTCTGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCGGTGGGTTTTATATTGTATCTGTATACAGAGTGGATTCTGTTA  300

seq1  ATTGATTTATGTATGTTGAACTATGTCTGCATCTCTGGGATGAGGCCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTTATGTATGTTGAACTATGTCTGCATCTCTGGGATGAGGCCAAC  350

seq1  TTGATCAACAGTGGATAATTCAATATATATGTCCTATTTATGGTTCAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCAACAGTGGATAATTCAATATATATGTCCTATTTATGGTTCAGTC  400

seq1  TCTTCTCTGCATTTTCAAAAGTTATGCATTTCTCTCCTCTTCCTGCTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTGCATTTTCAAAAGTTATGCATTTCTCTCCTCTTCCTGCTGCC  450

seq1  CAATGCAAAAACCAACCAAAATCAAAACCAAACCACCAGAAGCTGGAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCAAAAACCAACCAAAATCAAAACCAAACCACCAGAAGCTGGAAAG  500

seq1  AACCCAGATGTAAGGACCAAGGGCCTCTCCCCCCATTGATGACTGAATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGATGTAAGGACCAAGGGCCTCTCCCCCCATTGATGACTGAATAG  550

seq1  GCTATCCTCTGCTACATATGCAGCTAGAGCCATGAGTCCTACCATGGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCCTCTGCTACATATGCAGCTAGAGCCATGAGTCCTACCATGGGTT  600

seq1  TCTTTGATTGGTCATTTAGACCCAGGGAGCTCTGGGGCTACTGGTTATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGATTGGTCATTTAGACCCAGGGAGCTCTGGGGCTACTGGTTATCA  650

seq1  TAAAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT  700
      ||| ||   |||||||||||||||||||||||||||||||||||||||||
seq2  TAATGG---TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT  697

seq1  TTTTTTTTATGGGGCTGAAAACCCCTTCAGCACCTTGGGTAATTGCGGAT  750
      ||||||  | ||||||||||||||| | | |||||||||||| |||||||
seq2  TTTTTTAAAAGGGGCTGAAAACCCCCTTAACACCTTGGGTAA-TGCGGAT  746

seq1  GCCAATAAGAGCTTGCTGACAGGAGCCGGATAAAGCTGTCTCCTGAG-AG  799
      |||||||| | ||| |||||||||||| ||||||||||||||||||| ||
seq2  GCCAATAAAAACTTTCTGACAGGAGCCCGATAAAGCTGTCTCCTGAGAAG  796

seq1  GATCTGCCAGTGCCTGACAAATACAGAAGTGGATGCTCATAGCCATTCAT  849
      |||||||||||||||||||||| ||||||||||||| | |||||||||||
seq2  GATCTGCCAGTGCCTGACAAAT-CAGAAGTGGATGCCCCTAGCCATTCAT  845

seq1  TGGATGGAGCATGGATCCTC-TGCTTTTCAAATCCGATG-TTCCAAATCC  897
      |||||||||||||||||||| |||||||  ||||| ||| ||| ||||||
seq2  TGGATGGAGCATGGATCCTCTTGCTTTTTCAATCCCATGTTTCTAAATCC  895

seq1  ACATTTGTCCAAACAAAATCATGGTCAGGTCTA-TCACAACAATTCCCCA  946
       | |||||||||  |||||| |||||||||||| ||||| ||  | ||||
seq2  -CCTTTGTCCAACAAAAATC-TGGTCAGGTCTATTCACACCA--TTCCCA  941

seq1  CTCTCAGTACCAACTTCGGTCTTAGGGTTTTACTTC  982
      ||||||||| |||||||||||||| || ||||||||
seq2  CTCTCAGTA-CAACTTCGGTCTTAAGGGTTTACTTC  976

seq1: chr17_37905670_37906760
seq2: B6Ng01-126A10.g_70_1144 (reverse)

seq1  CAATACTGGACTTAGAGAAAGTGAACTAAAGTGTAAAAATGAACAACTGA  50
      ||||||| ||||||| |||||||| || |||||| |||||||   |||||
seq2  CAATACT-GACTTAG-GAAAGTGACCT-AAGTGT-AAAATGA--CACTGA  44

seq1  CACTCAAAACACTTTTGAGTTCTTGCTGTTATTTTATTTTATCTCCATCT  100
      ||| ||||||||  ||||| || |||||||| |||||||||||| |||||
seq2  CACCCAAAACAC--TTGAGGTC-TGCTGTTA-TTTATTTTATCT-CATCT  89

seq1  CAGGGAATGTAACAGTCAACTCAGAATCATGGCTTCTTTCTTTCTCAGAA  150
      ||||| |||||||||||||||||| |||||||| |||||||||||||| |
seq2  CAGGG-ATGTAACAGTCAACTCAG-ATCATGGC-TCTTTCTTTCTCAG-A  135

seq1  AATAGCTTAAGTCCATGGGAAATCAACACAATGCAATGCTGAGACTGGAG  200
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AATAGCTTAAGTCCATGGGAAATC-ACACAATGCAATGCTGAGACTGGAG  184

seq1  ACTCTCATTACATAGTGCACCTTAATCTAGTTAAGTAATCTAACAATTTC  250
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACTCTCATTACATAGTGCACATTAATCTAGTTAAGTAATCTAACAATTTC  234

seq1  TATTGTGTCGGGCTAAAGTGTCACTCAGCTGGTGACACATGGTCCTTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGTCGGGCTAAAGTGTCACTCAGCTGGTGACACATGGTCCTTTGG  284

seq1  TGAGTTATTGTGGGGCATGAGCATCCAAATAATCTTTTCCTAACAATCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTATTGTGGGGCATGAGCATCCAAATAATCTTTTCCTAACAATCTA  334

seq1  CATAAACCATGTGTACTATTATAGAATTTTAGAAATAGTGACTACATTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACCATGTGTACTATTATAGAATTTTAGAAATAGTGACTACATTGT  384

seq1  GGTGATAATGAACATTTTCCTGAGAATTTCTGCACAGACACTGATGCGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATAATGAACATTTTCCTGAGAATTTCTGCACAGACACTGATGCGTT  434

seq1  TCAGAAAGAGAATTAATAGTGTTTCATGCTTTCCATCTGCTAACAGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAGAGAATTAATAGTGTTTCATGCTTTCCATCTGCTAACAGAAGA  484

seq1  TTAAAAAAACATTTATGAGAGAGAGACAGACAGACAGACAGACAGAGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAACATTTATGAGAGAGAGACAGACAGACAGACAGACAGAGAAT  534

seq1  AAAATAAGGAATCCAGTCCACCAATGCACATTTCTAATCTTTTAAAGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAGGAATCCAGTCCACCAATGCACATTTCTAATCTTTTAAAGCTG  584

seq1  ACCAGTGTTTACTACACATGGAATCTTTATAACACTGAAGATCTATGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGTTTACTACACATGGAATCTTTATAACACTGAAGATCTATGTAA  634

seq1  TAGACAGAACACATAATCGTTATGTAAAATATTATATTGCACCTCTATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGAACACATAATCGTTATGTAAAATATTATATTGCACCTCTATGT  684

seq1  GAATGGCTTCATTCTGTTACTAGATGGGTGACTGCAGAGGATAGCCACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCTTCATTCTGTTACTAGATGGGTGACTGCAGAGGATAGCCACAT  734

seq1  GATGCACCTAACTTCCTCCACAAGAGGCTTCTCAGCGCAGGCACTTTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCACCTAACTTCCTCCACAAGAGGCTTCTCAGCGCAGGCACTTTTGC  784

seq1  ACTTCAATGAACATTTTACTATGTATTCACATTGGGCTCCAAAGTATTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAATGAACATTTTACTATGTATTCACATTGGGCTCCAAAGTATTTG  834

seq1  CAGCTTTAGTCTGAAACAGCTCAAAATGATGAATGTGAAATTTTACTTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTAGTCTGAAACAGCTCAAAATGATGAATGTGAAATTTTACTTGA  884

seq1  AGAAAATTACTTTAAGATTTGAGACAGTGGCTTATCCTTTTCAGCCTATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTACTTTAAGATTTGAGACAGTGGCTTATCCTTTTCAGCCTATT  934

seq1  CTGATACTTCCATCTTTCTGAAAAGCCTTCATATCTGTATGTGGACATAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATACTTCCATCTTTCTGAAAAGCCTTCATATCTGTATGTGGACATAT  984

seq1  ATTTGTCTATATACAGTACATGAGACACCATTCTCCTTTCATGGGTCATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCTATATACAGTACATGAGACACCATTCTCCTTTCATGGGTCATT  1034

seq1  ATGAAAATAGAACTTTCTGGTATGAATCTCAAGTGGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATAGAACTTTCTGGTATGAATCTCAAGTGGAATTC  1075