BAC Information

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BAC

Clone NameB6Ng01-127C23
Chromosome17 (Build37)
Map Location 76,710,585 - 76,711,558
singlet/doubletsinglet
Overlap genenone
Upstream geneLtbp1, Rasgrp3, 2810405J04Rik, LOC668787, LOC100043885, LOC100043886
Downstream geneEG624348
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127C23.g
ACCDH929367
length957
definitionDH929367|Mus musculus domesticus DNA, BAC clone: B6Ng01-127C23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaatttggatccggttggtgtatttgctaaccccagagatctg
ctgagtgggtctttgaaatctttaggacttcagggccaagtggtgcccac
aaattccctacatgaacatcctgagataaaattaggaatttgtatttact
tttatctgaatgttggaacgttaataaaaatcttttgtattaaattattg
atcaaaataaagacaaaaaaaaaataggaaccaaatctaagccctctgtg
attctcctagaaagaaacaagtcttgaaacagtttgtatctaatgccaaa
tattttaagcaccctaaagtgtaaatcataaatgtagaaagctaataaag
ccaatgaaaactctctctgaagggataatattaaattagacttaaatcat
atggagcaaagtgtccaaatggtccctccatcatggaaagaaaaatggaa
caagggagaaaagacacagcaatacaagcaagtgaaaagtataacagcat
cacaacatgttatacagatatttatgtctcttgaatagggaacagaaaaa
ttagacttttcttaagaataagaacacaccttgacaatagtattagttta
gatctatgtaacatgatagtctatcttaaagaaacagttggagaatgaat
agaatgttaaaccatgagttgcattaaaactcaggaaatagatttagaaa
aaggccacagacgaattgtaggatttaaagaaactaagaggtaaatcaaa
atgaggcataggagataaaattagtacagtggcttggataaaaaatgtcc
tcattgtctctggcatcttgaatactggggtccaagtcggtgaggtgttg
ggtatgaggtcggcttggagcagttacaatccaggatgggcttgatggat
aaaacaccccgcttactcaagttgctcctctgctagaatcaagctccaca
tactgct
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_76710585_76711558
seq2: B6Ng01-127C23.g_65_1021

seq1  GAATTCAGAAGTTGGATCCAGTTTGTGTATTTGCTAACCCCAGAGATATG  50
      ||||||| || |||||||| ||| ||||||||||||||||||||||| ||
seq2  GAATTCACAATTTGGATCCGGTTGGTGTATTTGCTAACCCCAGAGATCTG  50

seq1  CTGAGTGGGTCTTTGAAATCTTTAGGACTTCAGGGCCAAGTTATGCCCAC  100
      |||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  CTGAGTGGGTCTTTGAAATCTTTAGGACTTCAGGGCCAAGTGGTGCCCAC  100

seq1  AAATTCCCTAGATGAACATCCTGAAATAAAATTAGGAATTTGTATTTACT  150
      |||||||||| ||||||||||||| |||||||||||||||||||||||||
seq2  AAATTCCCTACATGAACATCCTGAGATAAAATTAGGAATTTGTATTTACT  150

seq1  TTTATCTGAATGTTGGAACGTTAATAAAAATCTTTTGTATTAAATTATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTGAATGTTGGAACGTTAATAAAAATCTTTTGTATTAAATTATTG  200

seq1  ATCAAAATAAAGACAAAAAAAAAATAGGAACCAAATCTAAGCCCTCTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATAAAGACAAAAAAAAAATAGGAACCAAATCTAAGCCCTCTGTG  250

seq1  ATTCAGCTAGAAAGAAACAAGTCTTGAAACAGTTTGTATCTAATGCCAAA  300
      ||||  ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCTAGAAAGAAACAAGTCTTGAAACAGTTTGTATCTAATGCCAAA  300

seq1  TATTTTAAGCACCCTAAAGTGTAAATCATAAATGTAGAAAGCTAATAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAAGCACCCTAAAGTGTAAATCATAAATGTAGAAAGCTAATAAAG  350

seq1  CCAATGAAAACTCTCTCTGAAGGGATAATATTAAATTAGACTTAAATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGAAAACTCTCTCTGAAGGGATAATATTAAATTAGACTTAAATCAT  400

seq1  ATGGAGCAAAGTGTCCAAATGGTCCCTCCATCATGGAAAGAAAAATGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGCAAAGTGTCCAAATGGTCCCTCCATCATGGAAAGAAAAATGGAA  450

seq1  CAAGGGAGAAAAGACACAGCAATACAAGCAAGTGAAAAGTATAACAGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAGAAAAGACACAGCAATACAAGCAAGTGAAAAGTATAACAGCAT  500

seq1  CACAACATATTAAACAGATATTTATGTCTCTTGAATAGGGAACAGAAAAA  550
      |||||||| ||| |||||||||||||||||||||||||||||||||||||
seq2  CACAACATGTTATACAGATATTTATGTCTCTTGAATAGGGAACAGAAAAA  550

seq1  TTAGACTTTTCTTAAGAATAAGAACACAGCTTGACAATAGTATTAGTTTA  600
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTAGACTTTTCTTAAGAATAAGAACACACCTTGACAATAGTATTAGTTTA  600

seq1  GATCTATGTAACATGATAGTCTAATCTTAAAGAAACAGTTTGAGAATGAA  650
      |||||||||||||||||||||| ||||||||||||||||| |||||||||
seq2  GATCTATGTAACATGATAGTCT-ATCTTAAAGAAACAGTTGGAGAATGAA  649

seq1  TAGAAATGTTAAACCATAAGTTGCATTAAAACTCAGGAAATAGATTTAGA  700
      ||| ||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TAG-AATGTTAAACCATGAGTTGCATTAAAACTCAGGAAATAGATTTAGA  698

seq1  AAAAGGCCACAGACAGAATGTAGGAATTAAAGAAAACTAAGAAGATAAAA  750
      ||||||||||||||  | ||||||| |||||| ||||||||| |   |||
seq2  AAAAGGCCACAGACGAATTGTAGGATTTAAAG-AAACTAAGAGG--TAAA  745

seq1  TCAAAATGAGGCATAGGAGATAAAATTTAGTACAGTGGCTTGAATAAAAA  800
      ||||||||||||||||||||||||| |||||||||||||||| |||||||
seq2  TCAAAATGAGGCATAGGAGATAAAA-TTAGTACAGTGGCTTGGATAAAAA  794

seq1  ATGTCCTCCATTGTCTCTGGCA-CTTGAATACTGGGGTCCCAGTCTGTGA  849
      ||||||| |||||||||||||| ||||||||||||||||| |||| ||||
seq2  ATGTCCT-CATTGTCTCTGGCATCTTGAATACTGGGGTCCAAGTCGGTGA  843

seq1  TGTGTTTGGGTATGAGGTCTGCTTGGAGCAAGTATACTATTCAGGATGGG  899
       ||| |||||||||||||| ||||||||| ||| ||| || |||||||||
seq2  GGTG-TTGGGTATGAGGTCGGCTTGGAGC-AGT-TACAATCCAGGATGGG  890

seq1  CTTTGAT-GATAAAACACCCCACTTACTTCTAGTTTGCTCTCTCTGCTAT  948
      | ||||| ||||||||||||| ||||| || || |||||| |||||||| 
seq2  C-TTGATGGATAAAACACCCCGCTTAC-TCAAG-TTGCTC-CTCTGCTAG  936

seq1  AAAATGTAAGCTCCCAGCATACTGCT  974
      ||     |||||||   |||||||||
seq2  AA---TCAAGCTCC--ACATACTGCT  957