BAC Information

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BAC

Clone NameB6Ng01-127J11
Chromosome17 (Build37)
Map Location 37,215,602 - 37,350,910
singlet/doubletdoublet
Overlap geneOlfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95
Upstream geneLOC667782, H2-Bl, EG667792, C920025E04Rik, H2-T10, LOC630294, LOC672718, ENSMUSG00000073403, LOC675325, LOC626268, EG667977, LOC625785, H2-T3, LOC100043127, EG667827, LOC435525, LOC677333, LOC100043134, LOC625881, Rpp21, Trim39, H2-M10.2, H2-M10.1, H2-M10.3, Gm318, LOC100043140, LOC674152, LOC383240, LOC224752, H2-M10.4, H2-M11, LOC667896, H2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1
Downstream geneOlfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127J11.bB6Ng01-127J11.g
ACCDH929667DH929668
length475940
definitionDH929667|Mus musculus domesticus DNA, BAC clone: B6Ng01-127J11, 5' end.DH929668|Mus musculus domesticus DNA, BAC clone: B6Ng01-127J11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,215,602 - 37,216,082)(37,349,968 - 37,350,910)
sequence
ttggaacttttcagagggtgtgtaaatgttagtgcctccagaagcggggt
tgcatggtagttattaaccattttgtggggttggctgcggtttgttagta
attgtgctccaagaaatgaaaaaaaaaaaaaaagcagatgtagggatctc
tttcctctctcgcctctatcctggtttccccctgtttagtgttagggagt
taagaaggtggagaagggtgggagaaagaagaacccacaaagtagtaatg
accagctatacacatatttttgagaatgctagtaatgaacacagagagag
gctgaggggaaagactatacaagttagtctacccaaaggagatgaatttc
atttctgcgtgagttggtggaggggactggtgttagaggaaggagatcag
ggaaagtggtaaatataggcctgtgaattaaaattggttatgtagattta
gcaagtgccctcttcactgctaagt
gaattcagggtcgtgctcagatatataaagaatttggaggcagcctgggc
cacttgagacagaatgagaaaggaaggagttagggataaaagagataaat
ggagtaagagagaaaagaaaggaagagaaagatggctggaggaatctagt
attctgcaaaagtatagtttaaggggaggtttgtaatcagggcagcaaac
actggcaaagaggttccctgtccttggcttggtcagtgggatagtggtgg
tgaactgttttaaaagagttaagggtagcctggtctacataatgagctct
aggctaactagagcctcaatgagatcctgtctcaataaataaatgaaaat
aaaataaagtaaaacaccgtagacaaaaaaaaaatcaacttctgacctct
atgtgtagacacatgaacacataaacacacgtacactcatacactataaa
atcattattgaacaatatcaatgaataatgtattaataataagtagaatt
actggctttgtagatgtagtgacatctacaatgatggaaagaagaaaata
atgaggggaaaaataaaaacggctgaccaaggagcatatatgagagctaa
gagagaaacccataacccttgaaattgtctgcagaaggttctcccaggcc
gtcctgagatccctgccacctaaggaacagactccaaaataacattaatt
agttgtgtgaggctctcccaattgtaaagcagattgtactgggagactca
gtcctcagagacataaggaaaatcctcctgctgagggacccatgttgcag
agggtgaaaattaagcagttaccaggccaccaccctgcttttaatcattg
cctatttttccagtatgaaacatttatacagagatgtacaggaaaacaca
gggagatctcggataaataaagcagggactgactgcagcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37215602_37216082
seq2: B6Ng01-127J11.b_45_524

seq1  GAATTCTTGGAACTTTTCAGAGGGTGTGTAAATGTTAGTGCCTCCAGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGAACTTTTCAGAGGGTGTGTAAATGTTAGTGCCTCCAGAAG  50

seq1  CGGGGTTGCATGGTAGTTATTAACCATTTTGTGGGGTTGGCTGCGGTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGTTGCATGGTAGTTATTAACCATTTTGTGGGGTTGGCTGCGGTTTG  100

seq1  TTAGTAATTGTGCTCCAAGAAATGAAAAAAAAAAAAAAAGCAGATGTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAATTGTGCTCCAAGAAATGAAAAAAAAAAAAAAAGCAGATGTAGG  150

seq1  GATCTCTTTCCTCTCTCGCCTCTATCCTGGTTTCCCCCTGTTTAGTGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTTTCCTCTCTCGCCTCTATCCTGGTTTCCCCCTGTTTAGTGTTA  200

seq1  GGGAGTTAAGAAGGTGGAGAAGGGTGGGAGAAAGAAGAACCCACAAAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTTAAGAAGGTGGAGAAGGGTGGGAGAAAGAAGAACCCACAAAGTA  250

seq1  GTAATGACCAGCTATACACATATTTTTGAGAATGCTAGTAATGAACACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGACCAGCTATACACATATTTTTGAGAATGCTAGTAATGAACACAG  300

seq1  AGAGAGGCTGAGGGGAAAGACTATACAAGTTAGTCTACCCAAAGGAGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGCTGAGGGGAAAGACTATACAAGTTAGTCTACCCAAAGGAGATG  350

seq1  AATTTCATTTCTGCGTGAGTTGGTGGAGGGGACTGGTGTTAGAGGAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCATTTCTGCGTGAGTTGGTGGAGGGGACTGGTGTTAGAGGAAGGA  400

seq1  GATCAGGGAAAGTGGTAAATATAGGCCTGTGAATAAAAATTGGCTATGTA  450
      |||||||||||||||||||||||||||||||||| |||||||| ||||||
seq2  GATCAGGGAAAGTGGTAAATATAGGCCTGTGAATTAAAATTGGTTATGTA  450

seq1  GATTTAAGCAAGTGCCCTCTTCACTGCTAAG  481
      ||||| |||||||||||||||||||||||||
seq2  GATTT-AGCAAGTGCCCTCTTCACTGCTAAG  480

seq1: chr17_37349968_37350910
seq2: B6Ng01-127J11.g_68_1006 (reverse)

seq1  GCTGCAGGTCAGTCCCTGCTTTATTTTATCCGGGATCTCCCTGTGTTTTC  50
      |||||| |||||||||||||||| |||||||| |||||||||||||||||
seq2  GCTGCA-GTCAGTCCCTGCTTTA-TTTATCCGAGATCTCCCTGTGTTTTC  48

seq1  CTGTACATCTTCTGTATAATGTTTTCCTACTTGGAAAAATAGCCATTGA-  99
      ||||||||| |||||||||   |||| ||| ||||||||||| || ||| 
seq2  CTGTACATC-TCTGTATAAATGTTTCATAC-TGGAAAAATAGGCAATGAT  96

seq1  TAAAAGCA-GGTGGT-GCCTGGTAACTGCCTTAATTTTTCACCCTCTGCA  147
      |||||||| |||||| |||||||||||| ||||| |||||||||||||||
seq2  TAAAAGCAGGGTGGTGGCCTGGTAACTG-CTTAA-TTTTCACCCTCTGCA  144

seq1  ACATGGGTCCCTCAGCAGGAGGATTTTCCTTATGTCTCTGAGGACCTGAG  197
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACATGGGTCCCTCAGCAGGAGGATTTTCCTTATGTCTCTGAGGA-CTGAG  193

seq1  TCTCCCAGTACAATCTGCTTTACAATTGGGAGAGCCTCACACAACTAATT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCAGTACAATCTGCTTTACAATTGGGAGAGCCTCACACAACTAATT  243

seq1  AATGTTATTTTGGAGTCTGTTCCTTAGGTGGCAGGGATCTCAGGACGGCC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTATTTTGGAGTCTGTTCCTTAGGTGGCAGGGATCTCAGGACGGCC  293

seq1  TGGGAGAACCTTCTGCAGACAATTTCAAGGGTTATGGGTTTCTCTCTTAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGAACCTTCTGCAGACAATTTCAAGGGTTATGGGTTTCTCTCTTAG  343

seq1  CTCTCATATATGCTCCTTGGTCAGCCGTTTTTATTTTTCCCCTCATTATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATATATGCTCCTTGGTCAGCCGTTTTTATTTTTCCCCTCATTATT  393

seq1  TTCTTCTTTCCATCATTGTAGATGTCACTACATCTACAAAGCCAGTAATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTTCCATCATTGTAGATGTCACTACATCTACAAAGCCAGTAATT  443

seq1  CTACTTATTATTAATACATTATTCATTGATATTGTTCAATAATGATTTTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTATTATTAATACATTATTCATTGATATTGTTCAATAATGATTTTA  493

seq1  TAGTGTATGAGTGTACGTGTGTTTATGTGTTCATGTGTCTACACATAGAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTATGAGTGTACGTGTGTTTATGTGTTCATGTGTCTACACATAGAG  543

seq1  GTCAGAAGTTGATTTTTTTTTTGTCTACGGTGTTTTACTTTATTTTATTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAAGTTGATTTTTTTTTTGTCTACGGTGTTTTACTTTATTTTATTT  593

seq1  TCATTTATTTATTGAGACAGGATCTCATTGAGGCTCTAGTTAGCCTAGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTATTTATTGAGACAGGATCTCATTGAGGCTCTAGTTAGCCTAGAG  643

seq1  CTCATTATGTAGACCAGGCTACCCTTAACTCTTTTAAAACAGTTCACCAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTATGTAGACCAGGCTACCCTTAACTCTTTTAAAACAGTTCACCAC  693

seq1  CACTATCCCACTGACCAAGCCAAGGACAGGGAACCTCTTTGCCAGTGTTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATCCCACTGACCAAGCCAAGGACAGGGAACCTCTTTGCCAGTGTTT  743

seq1  GCTGCCCTGATTACAAACCTCCCCTTAAACTATACTTTTGCAGAATACTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCCTGATTACAAACCTCCCCTTAAACTATACTTTTGCAGAATACTA  793

seq1  GATTCCTCCAGCCATCTTTCTCTTCCTTTCTTTTCTCTCTTACTCCATTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCTCCAGCCATCTTTCTCTTCCTTTCTTTTCTCTCTTACTCCATTT  843

seq1  ATCTCTTTTATCCCTAACTCCTTCCTTTCTCATTCTGTCTCAAGTGGCCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTTTATCCCTAACTCCTTCCTTTCTCATTCTGTCTCAAGTGGCCC  893

seq1  AGGCTGCCTCCAAATTCTTTATATATCTGAGCACGACCCTGAATTC  943
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGCCTCCAAATTCTTTATATATCTGAGCACGACCCTGAATTC  939