BAC Information

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BAC

Clone NameB6Ng01-128K13
Chromosome17 (Build37)
Map Location 9,815,811 - 9,921,429
singlet/doubletdoublet
Overlap gene4932702K14Rik
Upstream genePde10a, 1700010I14Rik, EG667165, EG667170, LOC666143
Downstream geneQk, LOC675815, Pacrg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128K13.bB6Ng01-128K13.g
ACCDH930450DH930451
length6281,142
definitionDH930450|Mus musculus domesticus DNA, BAC clone: B6Ng01-128K13, 5' end.DH930451|Mus musculus domesticus DNA, BAC clone: B6Ng01-128K13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,815,811 - 9,816,355)(9,920,280 - 9,921,429)
sequence
gaattcttcaccctatccccctctcctttgcctctgagagggtgctcccc
tattctgtcacacaccccccacctcacccccctatgtcctccttccctgg
gcatcaagtctctacaggattaggtgcatcgtctcccaatgaggtcagcc
aatgtagtcctctgctacatatgtgccatgggccacggaccagcccccat
atactcttggattggtggcttagtctctggggctcccagagattcaggtt
agttgatactgttggtcttcctatgggcttgccaaaatgcagtagagatt
gaatgaaaggccatccagtgactggcccaacttgggatccaccccatgga
tggacaccaaaccctgaaactattaatgatgccttgtgcttgcagatagt
agccctgcatagctgtcctctctgagaggctctaccagcagctgacttag
agagacagacacagattcttatggctaaccattggactgaggtcagggac
ccctatggaagagtttggggaagaactgaggaaatggagatggcaacccc
ataggaaaaccaacagtatcaactatgctgcctttttaatccatagatct
aaataacttggggtttttattattattt

gaattcctgtcactccacttcctcaccacccctgataggtatgcagtggt
gtcacactatggcttttaagtagaatttaaatgctgactgttaaagttga
gcgcttttccatagggtatttgtatgctgtgtgttttattttgagaagtg
actattgagtatattcttaaaaaatcggattatgtgtgcttttaaaaaat
tgatttctaggagttatttacatattatggatacatgcttcatttcaaac
atgtgttatgaatcagagctccaaacactaagccatgaattgtcttgtta
ccatttaaatggcctcctttgaccagaagagcctccttaattttaaatag
tactatgactcaactcccttatttttcttttcttattagtacatatttat
gtaccttttacatatttattttacttcaagactatgagaatctctgtaag
ttttattgtttgccttttccaattagatttgagatctgtcacaaactgat
ctccttgtacaggatccaaacacatttgttttccaggagggcagcccgtc
aacccagaaccgtgctgaagaggtaagcattttgcatcctgtatgtttct
aggctgctctttcacccaatcacttggatcactttgtgtgtcggagtctt
tctttactaagttggattactcctgaggttctcctgatctttgcacaaat
atgaggttgtagagagcgaagtcttttgtttttgtttttgtttttggctc
tgagaagaaatgacactgaagtttgtgagtgctctgtacagtctcagaaa
gttcagatactagtggcttgggagattttgctagtttttaactctctgaa
tccagggatcaggtcagaactgagaaagctaaatggcatgaacagctgca
tcgtccatctgggtaccacgcagtgtgctagggcacacagacatctgaga
gatgacaggggtcagcatgggaggggctcctggctgaccctcacctgggc
aagcttcctcctgaggttcaggcagttgttcctgctgctgttcagcagat
cgaataagttgttctttgtgagtgcattgaggagacacatttctggttaa
ttgtacaatagtcttctcagtttaaaattacacaagatctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_9815811_9816355
seq2: B6Ng01-128K13.b_132_676

seq1  ATGTCCTCCTTCCCTGGGCATCAAGTCTCTACAGGATTAGGTGCATCGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTCCTTCCCTGGGCATCAAGTCTCTACAGGATTAGGTGCATCGTC  50

seq1  TCCCAATGAGGTCAGCCAATGTAGTCCTCTGCTACATATGTGCCATGGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATGAGGTCAGCCAATGTAGTCCTCTGCTACATATGTGCCATGGGC  100

seq1  CACGGACCAGCCCCCATATACTCTTGGATTGGTGGCTTAGTCTCTGGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGACCAGCCCCCATATACTCTTGGATTGGTGGCTTAGTCTCTGGGGC  150

seq1  TCCCAGAGATTCAGGTTAGTTGATACTGTTGGTCTTCCTATGGGCTTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAGATTCAGGTTAGTTGATACTGTTGGTCTTCCTATGGGCTTGCC  200

seq1  AAAATGCAGTAGAGATTGAATGAAAGGCCATCCAGTGACTGGCCCAACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCAGTAGAGATTGAATGAAAGGCCATCCAGTGACTGGCCCAACTT  250

seq1  GGGATCCACCCCATGGATGGACACCAAACCCTGAAACTATTAATGATGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCCACCCCATGGATGGACACCAAACCCTGAAACTATTAATGATGCC  300

seq1  TTGTGCTTGCAGATAGTAGCCCTGCATAGCTGTCCTCTCTGAGAGGCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTTGCAGATAGTAGCCCTGCATAGCTGTCCTCTCTGAGAGGCTCT  350

seq1  ACCAGCAGCTGACTTAGAGAGACAGACACAGATTCTTATGGCTAACCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCAGCTGACTTAGAGAGACAGACACAGATTCTTATGGCTAACCATT  400

seq1  GGACTGAGGTCAGGGACCCCTATGGAAGAGTTTGGGGAAGAACTGAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGAGGTCAGGGACCCCTATGGAAGAGTTTGGGGAAGAACTGAGGAA  450

seq1  ATGGAGATGGCAACCCCATAGGAAAACCAACAGTATCAACTATGCTCCCT  500
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATGGAGATGGCAACCCCATAGGAAAACCAACAGTATCAACTATGCTGCCT  500

seq1  TTTTAATCCATAGTTCTATATAATTTGGGGTTTTTACTATTATTT  545
      ||||||||||||| |||| |||| |||||||||||| ||||||||
seq2  TTTTAATCCATAGATCTAAATAACTTGGGGTTTTTATTATTATTT  545


seq1: chr17_9920280_9921429
seq2: B6Ng01-128K13.g_67_1208 (reverse)

seq1  TCAGATCTTCTGTTA-TCTAAACT-AGAAGACTATTGATACAATTTAACC  48
      ||||||||| ||| | | |||||| |||||||||||| ||||| ||||||
seq2  TCAGATCTTGTGTAATTTTAAACTGAGAAGACTATTG-TACAA-TTAACC  48

seq1  AAAGAATGTGTCCTCCTCAATGCCACTCACAAAGACATACTTATTCGATC  98
      | | ||||||| |||||||||| ||||||||||||   ||||||||||||
seq2  AGA-AATGTGT-CTCCTCAATG-CACTCACAAAGAACAACTTATTCGATC  95

seq1  TGCTGAACAGCAGCAGGAACCAACTGCCTGAGACCTCAGGAGGAAGCTTG  148
      ||||||||||||||||||| ||||||||||| ||||||||||||||||||
seq2  TGCTGAACAGCAGCAGGAA-CAACTGCCTGA-ACCTCAGGAGGAAGCTTG  143

seq1  CCCAGGTGAGGGTCAGCCAGGAGCCCCTCCCATGCTGACCCCTGTCATCT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCCAGGTGAGGGTCAGCCAGGAGCCCCTCCCATGCTGACCCCTGTCATC-  192

seq1  TCTCAGAGTGTCTGTGTGCCCTAGCACACCTGCGTGGTACCCAGATGGAC  248
      ||||||| |||||||||||||||||||| |||||||||||||||||||||
seq2  TCTCAGA-TGTCTGTGTGCCCTAGCACA-CTGCGTGGTACCCAGATGGAC  240

seq1  GATGCAGCTGTTCATGCCATTTTAGCTTTCTCAGTTCTGACCTGATCCCT  298
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GATGCAGCTGTTCATGCCA-TTTAGCTTTCTCAGTTCTGACCTGATCCCT  289

seq1  GGATTCAGAGAGTT-AAAACTAGCAAAATCTCCCAAGCCACTAGTATCTG  347
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGATTCAGAGAGTTAAAAACTAGCAAAATCTCCCAAGCCACTAGTATCTG  339

seq1  AACTTTCTGAGACTGTACAGAGCACTCACAAACTTCAGTGTCATTTCTTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCTGAGACTGTACAGAGCACTCACAAACTTCAGTGTCATTTCTTC  389

seq1  TCAGAGCCAAAAACAAAAACAAAAACAAAAGACTTCGCTCTCTACAACCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGCCAAAAACAAAAACAAAAACAAAAGACTTCGCTCTCTACAACCT  439

seq1  CATATTTGTGCAAAGATCAGGAGAACCTCAGGAGTAATCCAACTTAGTAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTGTGCAAAGATCAGGAGAACCTCAGGAGTAATCCAACTTAGTAA  489

seq1  AGAAAGACTCCGACACACAAAGTGATCCAAGTGATTGGGTGAAAGAGCAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGACTCCGACACACAAAGTGATCCAAGTGATTGGGTGAAAGAGCAG  539

seq1  CCTAGAAACATACAGGATGCAAAATGCTTACCTCTTCAGCACGGTTCTGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAAACATACAGGATGCAAAATGCTTACCTCTTCAGCACGGTTCTGG  589

seq1  GTTGACGGGCTGCCCTCCTGGAAAACAAATGTGTTTGGATCCTGTACAAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACGGGCTGCCCTCCTGGAAAACAAATGTGTTTGGATCCTGTACAAG  639

seq1  GAGATCAGTTTGTGACAGATCTCAAATCTAATTGGAAAAGGCAAACAATA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCAGTTTGTGACAGATCTCAAATCTAATTGGAAAAGGCAAACAATA  689

seq1  AAACTTACAGAGATTCTCATAGTCTTGAAGTAAAATAAATATGTAAAAGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTACAGAGATTCTCATAGTCTTGAAGTAAAATAAATATGTAAAAGG  739

seq1  TACATAAATATGTACTAATAAGAAAAGAAAAATAAGGGAGTTGAGTCATA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAATATGTACTAATAAGAAAAGAAAAATAAGGGAGTTGAGTCATA  789

seq1  GTACTATTTAAAATTAAGGAGGCTCTTCTGGTCAAAGGAGGCCATTTAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTATTTAAAATTAAGGAGGCTCTTCTGGTCAAAGGAGGCCATTTAAA  839

seq1  TGGTAACAAGACAATTCATGGCTTAGTGTTTGGAGCTCTGATTCATAACA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAACAAGACAATTCATGGCTTAGTGTTTGGAGCTCTGATTCATAACA  889

seq1  CATGTTTGAAATGAAGCATGTATCCATAATATGTAAATAACTCCTAGAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTGAAATGAAGCATGTATCCATAATATGTAAATAACTCCTAGAAA  939

seq1  TCAATTTTTTAAAAGCACACATAATCCGATTTTTTAAGAATATACTCAAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTTTTAAAAGCACACATAATCCGATTTTTTAAGAATATACTCAAT  989

seq1  AGTCACTTCTCAAAATAAAACACACAGCATACAAATACCCTATGGAAAAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTTCTCAAAATAAAACACACAGCATACAAATACCCTATGGAAAAG  1039

seq1  CGCTCAACTTTAACAGTCAGCATTTAAATTCTACTTAAAAGCCATAGTGT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCAACTTTAACAGTCAGCATTTAAATTCTACTTAAAAGCCATAGTGT  1089

seq1  GACACCACTGCATACCTATCAGGGGTGGTGAGGAAGTGGAGTGACAGGAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCACTGCATACCTATCAGGGGTGGTGAGGAAGTGGAGTGACAGGAA  1139

seq1  TTC  1150
      |||
seq2  TTC  1142


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