BAC Information

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BAC

Clone NameB6Ng01-128K17
Chromosome17 (Build37)
Map Location 3,595,072 - 3,595,691
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383196, LOC100040029, LOC432993, D030013I16Rik, LOC100040128, 1700024P12Rik, LOC435499, LOC224487, Rbm16, LOC665812, LOC621579, LOC624144, Tiam2, LOC630810, Tfb1m, Cldn20, 1700102H20Rik
Downstream geneNox3, 4930470H14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128K17.bB6Ng01-128K17.g
ACCDH930458DH930459
length6231,096
definitionDH930458|Mus musculus domesticus DNA, BAC clone: B6Ng01-128K17, 5' end.DH930459|Mus musculus domesticus DNA, BAC clone: B6Ng01-128K17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaagaaatggtgctttcaatcatacagtttgctcttttcctag
gttagcttatgttgtatgaaactctctcttgccatgtggggactagcagt
atgcagtctggtgtttcacgctttgcagggtatctagccgccaatctctt
acgaatacagagggatggttgtatttgatgaggcattagagtggaggtta
atgtgcaagactctcagcggaggaatctgacgtcctccttcttaatgttt
gcattttccttcgtaaaggcctgagatgtatatcttctgaagaaaagctg
gatggcgtgcctacatttcccttgttagagacctcttcgaatttgttctt
ttcctttaaatacatagattgactcactttttctcttccttcctttccat
ctttccctccctccctcttccttcctcctttccttttcatcttttccttc
cttttcatccttttttcctcccttcctccttccctccttcccctccctct
tcctccttcttccttccttcctcccttccccttcccccttccttcctccc
ttcccccattcccccttccccttccttccttccttccttcctcccttccc
ccattcccccgtcccggacttcc
gaattcagtggtaggactgggttccatttggttgtgtttttggccaaagg
ggtctcatggagatccctaaacaactcaggctgagtctaagacagcaggc
tgctctctaaattctgagagtggagccccattgtcaagggcaagagccat
acagctcactgaacgtggaaaagtcagactggtgcctgcatggggcttct
cactccccaatgttgtaggctctttaatgagggaaggtacgctgcgggcc
actgaaagagaaacaaggataccaacccagccactaaacctttgaccaat
aatctgttctgattgtaagatgtggtgaggcaataatgactcagggcttg
tgggaggggccaatcaatgtctgacttaacttgaggcctactgtacaaga
agcccatgccagacactgcttggatggccaggaagtgggagactggatag
cccagagacctaggatagaaccaaacacaattgttccaataataataata
ataataaaaaagaatcaatgaaatgattttaataatattctgctatactc
atatatcagtgtgttgtccaatcaataacagaaaggcttcttccaacagc
aggtgggagctgatgcagagaaccacagatactttgcagaaagagtctaa
attggaagttcattggcttcctccccttggagcttggacaaacctttgaa
agaggaggtggaacaattatatgagtcaaaggggatataacaccaggaga
acaggactcactgagccaaccaagccaggctcacatgggctcacagagac
tgaagcagcaagcacaaggtctgcataggtccataccaggtcattatata
tgttgtgggttcttaagctggtgtttttgtggggctgctaactatagaag
tggatgtctctctgactcttttacctgctcttggaactcttttcctccgg
gtgggttgccttatccggttttgctgtaagggcctttgccttgtcttatt
gtatttgtttgtcatatagatgtgtctctggaaagcctggtctcttctga
tgagagatggagaagtggaatccaggggggtagggaggtatgggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_3595072_3595691
seq2: B6Ng01-128K17.b_48_670

seq1  GAATTCAGAAGAAATGGTGCTTTCAATCATACAGTTTGCTCTTTTCCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAGAAATGGTGCTTTCAATCATACAGTTTGCTCTTTTCCTAG  50

seq1  GTTAGCTTATGTTGTATGAAACTCTCTCTTGCCATGTGGGGACTAGCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCTTATGTTGTATGAAACTCTCTCTTGCCATGTGGGGACTAGCAGT  100

seq1  ATGCAGTCTGGTGTTTCACGCTTTGCAGGGTATCTAGCCGCCAATCTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTCTGGTGTTTCACGCTTTGCAGGGTATCTAGCCGCCAATCTCTT  150

seq1  ACGAATACAGAGGGATGGTTGTATTTGATGAGGCATTAGAGTGGAGGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATACAGAGGGATGGTTGTATTTGATGAGGCATTAGAGTGGAGGTTA  200

seq1  ATGTGCAAGACTCTCAGCGGAGGAATCTGACGTCCTCCTTCTTAATGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCAAGACTCTCAGCGGAGGAATCTGACGTCCTCCTTCTTAATGTTT  250

seq1  GCATTTTCCTTCGTAAAGGCCTGAGATGTATATCTTCTGAAGAAAAGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTCCTTCGTAAAGGCCTGAGATGTATATCTTCTGAAGAAAAGCTG  300

seq1  GATGGCGTGCCTACATTTCCCTTGTTAGAGACCTCTTCGAATTTGTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCGTGCCTACATTTCCCTTGTTAGAGACCTCTTCGAATTTGTTCTT  350

seq1  TTCCTTTAAATACATAGATTGACTCACTTTTTCTCTTCCTTCCTTTCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTAAATACATAGATTGACTCACTTTTTCTCTTCCTTCCTTTCCAT  400

seq1  CTTTCCCTCCCTCCCTCTTCCTTCCTCCTTTCCTTTTCATCTTTTCCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCTCCCTCCCTCTTCCTTCCTCCTTTCCTTTTCATCTTTTCCTTC  450

seq1  CTTTTCATCCTTTTTTCCTCCCTTCCTCCTTCCCTCCTTCCCCTCCCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATCCTTTTTTCCTCCCTTCCTCCTTCCCTCCTTCCCCTCCCTCT  500

seq1  TCCTCCTTCTTCCTTCCTTCCTCCCTTCCCCTTCCCCCTTCCTTCCTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTTCTTCCTTCCTTCCTCCCTTCCCCTTCCCCCTTCCTTCCTCCC  550

seq1  TTCCCCCATTCCCCCTTCCCCTTCCTTCCTTCCTTCCTTCCTCCCTTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCATTCCCCCTTCCCCTTCCTTCCTTCCTTCCTTCCTCCCTTCCC  600

seq1  CCATTCCCCCTTCCC---CTTCC  620
      |||||||||| ||||   |||||
seq2  CCATTCCCCCGTCCCGGACTTCC  623