BAC Information

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BAC

Clone NameB6Ng01-130L02
Chromosome17 (Build37)
Map Location 16,723,832 - 16,724,871
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665017, LOC100041775, 5830433I10Rik, Chd1, Rgmb, LOC100041365, Eif3s6-ps3, LOC100041383, LOC100041394, LOC213781
Downstream geneLOC100041407, LOC665072, EG383211, LOC626785, LOC665085, BC002059, BC018101, Zfp97, EG382161, LOC676238, EG626854, LOC100041965, Riok2, Lix1, LOC383297, Lnpep
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130L02.bB6Ng01-130L02.g
ACCDH931944DH931945
length1,0521,029
definitionDH931944|Mus musculus domesticus DNA, BAC clone: B6Ng01-130L02, 5' end.DH931945|Mus musculus domesticus DNA, BAC clone: B6Ng01-130L02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccagacctttgaagagctaataacagtacccctcaaactatt
ccacacaatagaaacaaagagaacactaattcattctatgaagccatagt
tactttgatacataaaccacacatagacccaacgaaaaaaagagacattc
agggcaatttcgcttatgaatatcaatgcaaaaccactcaatataattct
agcaaaccaaatccaagaatatatcaaaaccatcattaccctgatcaagt
atgcttcatcccagacatgccgtgatgaatatacaaatatccatcaagga
aatatgctatataaaaaatgcaaggaaaaagtcatattatcatctcatta
gatgctgaaaagccctcaacaaaatacaacaccctttcatgttaaaagtc
ttggagagatcaggaattcaaggcacatatataaacagaataaaagcaat
attcagcaaaccaacagccaacatcaaattaaattgaaagaaactagtag
caatttcactaaaatcagggacaaaacaaggctgaccactctccttgttt
attcaatatagtactcaagctataccacttctgggcatatacacaaaaga
ttcttccatcccattaggacacttgctcaactttttaaatagcagcttta
ttcataatagtcagaaacttgaaacagcctaaaatatccctgaactgaat
aatgagtaaaggaaataaggttcatttacacaatggaatactactcagct
attaataacaaggacatgacaattttttttaggtaaatggatggaactag
aaaatatcttctttgagtaaagtaactcagacccaaaagggacatgcaca
gtatgggactcataagcagatattagccataaagtacagaataaccacgc
tacaattccagacacaaggaagccaataaccagggaagttccaagggagg
ggtgattgaatctgtctcaaagaaggaaatagatatcaaagtgaattgta
gggagggaacctaaatagaggagcagagaggggatttgttttgagatgtg
gt
gaattcattgtgttgaaaatttaaaaatcaatttcacatgaattgttaca
ttagtttccaaagtttctaataaataattagtatacatttgatactgttg
ctaccctttaaaaggataagttagttaacttgtctgagcacatacctagg
aaggtgatagaagaaataaaattctactttgagtgttaactgtctctttc
tgtttctcttgctagtcatcaaagcaccttctgcgtttatagcttactct
ggaatatttgacagtaaaattcatgggtttaacctcactaacttgatgtt
gtaactatagtactaaatcaagaaacaagcatgattttacattgaagtct
ttttacaaaatataaatggtccttataaatactttcttctgcttccaaac
ttaagtcagaacagaagacttctaaaatagtaacaggaatggaaacctta
ttttgtttctcatttactacttgttagattgcctggaatattctcagaaa
gtcttattttcctaggaactccagagtatcaagtaaattgcagttaagat
attataaagaacatttatatagacaatacaatttctacttaatttgaaat
agattattttaaaagtttcttatcttgtagcttcctgtaacccccgagtg
ctgggtactgatctactgacttcaagcatacaaatatcttgacttgtgta
aatgtcttaaatatagaaccaagcctgttactttttctaatacagcaacc
cttactgagcttttattctatgttagaaataagaacaaatgtgagaacat
gagaatgtgttatgacagcacagtacccagtatttccatgttaacgactt
tcctaaaattttcaatcagctacaaagtgtttctaaggactgcaaaggaa
acatccctgcatactcatcaatccttcacaacacaaactcaacaaacacc
ctctagtaaacaatcatttaaattacaaacccaccatgatctgtactcta
gccaatgttgagtacacatacaaaaaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_16723832_16724871
seq2: B6Ng01-130L02.g_67_1093

seq1  GAATTCATTGTGTTGAAAATTTAAAAATCAATTTCACATGAATTGTTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTGTTGAAAATTTAAAAATCAATTTCACATGAATTGTTACA  50

seq1  TTAGTTTCCAAAGTTTCTAATAAATAATTAGTATACATTTGATACTGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTCCAAAGTTTCTAATAAATAATTAGTATACATTTGATACTGTTG  100

seq1  CTACCCTTTAAAAGGATAAGTTAGTTAACTTGTCTGAGCACATACCTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCTTTAAAAGGATAAGTTAGTTAACTTGTCTGAGCACATACCTAGG  150

seq1  AAGGTGATAGAAGAAATAAAATTCTACTTTGAGTGTTAACTGTCTCTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGATAGAAGAAATAAAATTCTACTTTGAGTGTTAACTGTCTCTTTC  200

seq1  TGTTTCTCTTGCTAGTCATCAAAGCACCTTCTGCGTTTATAGCTTACTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCTTGCTAGTCATCAAAGCACCTTCTGCGTTTATAGCTTACTCT  250

seq1  GGAATATTTGACAGTAAAATTCATGGGTTTAACCTCACTAACTTGATGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATTTGACAGTAAAATTCATGGGTTTAACCTCACTAACTTGATGTT  300

seq1  GTAACTATAGTACTAAATCAAGAAACAAGCATGATTTTACATTGAAGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTATAGTACTAAATCAAGAAACAAGCATGATTTTACATTGAAGTCT  350

seq1  TTTTACAAAATATAAATGGTCCTTATAAATACTTTCTTCTGCTTCCAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACAAAATATAAATGGTCCTTATAAATACTTTCTTCTGCTTCCAAAC  400

seq1  TTAAGTCAGAACAGAAGACTTCTAAAATAGTAACAGGAATGGAAACCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTCAGAACAGAAGACTTCTAAAATAGTAACAGGAATGGAAACCTTA  450

seq1  TTTTGTTTCTCATTTACTACTTGTTAGATTGCCTGGAATATTCTCAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTCTCATTTACTACTTGTTAGATTGCCTGGAATATTCTCAGAAA  500

seq1  GTCTTATTTTCCTAGGAACTCCAGAGTATCAAGTAAATTGCAGTTAAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATTTTCCTAGGAACTCCAGAGTATCAAGTAAATTGCAGTTAAGAT  550

seq1  ATTATAAAGAACATTTATATAGACAATACAATTTCTACTTAATTTGAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAAGAACATTTATATAGACAATACAATTTCTACTTAATTTGAAAT  600

seq1  AGATTATTTTAAAAGTTTCTTATCTTGTAGCTTCCTGTAACCCCCGAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATTTTAAAAGTTTCTTATCTTGTAGCTTCCTGTAACCCCCGAGTG  650

seq1  CTGGGTACTGATCTACTGACTTCAAGCATACAAATATCTTGACTTGTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTACTGATCTACTGACTTCAAGCATACAAATATCTTGACTTGTGTA  700

seq1  AATGTCTTAAATATAGAACCAAGCCTGTTACTTTTTCTAATACAGCAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTTAAATATAGAACCAAGCCTGTTACTTTTTCTAATACAGCAACC  750

seq1  CTTACTGAGCTTTTATTCTATGTTAGAAATAAGAACAAATGTGAGAACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGAGCTTTTATTCTATGTTAGAAATAAGAACAAATGTGAGAACAT  800

seq1  GAGAATGTGTTATGACAGCACAGTACCCAGTATTTCCATGTTAACGACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGTGTTATGACAGCACAGTACCCAGTATTTCCATGTTAACGACTT  850

seq1  TCCTAAAATTATCAATCAGCTACAAAGTGTTTCTAAAGGAACTGCAAAGG  900
      |||||||||| |||||||||||||||||||||||||  | ||||||||||
seq2  TCCTAAAATTTTCAATCAGCTACAAAGTGTTTCTAA--GGACTGCAAAGG  898

seq1  AAACATCCCTGCATACTCATCAATCCTTCACAACCACAAACTCAAACAAA  950
      ||||||||||||||||||||||||||||||||| ||||||||| ||||||
seq2  AAACATCCCTGCATACTCATCAATCCTTCACAA-CACAAACTC-AACAAA  946

seq1  CACCCTCTAGTAAACAAATCATTTAAATTAACCAAAACCCACACATTGAT  1000
      ||||||||||||||| ||||||||||||||    |||||||| || ||||
seq2  CACCCTCTAGTAAAC-AATCATTTAAATTA---CAAACCCAC-CA-TGAT  990

seq1  CTGTTACTCTAGCCAAATGTTGAGTAACACATACAAAAAA  1040
      ||| |||||||||| |||||||||| ||||||||||||||
seq2  CTG-TACTCTAGCC-AATGTTGAGT-ACACATACAAAAAA  1027