BAC Information

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BAC

Clone NameB6Ng01-130N04
Chromosome17 (Build37)
Map Location 93,747,504 - 93,811,750
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC627395, LOC676141, LOC668877, LOC100043746, LOC100043747, LOC100043748, LOC100043907, Adcyap1, LOC676157, LOC627503
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130N04.bB6Ng01-130N04.g
ACCDH932039DH932040
length7551,060
definitionDH932039|Mus musculus domesticus DNA, BAC clone: B6Ng01-130N04, 5' end.DH932040|Mus musculus domesticus DNA, BAC clone: B6Ng01-130N04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,747,504 - 93,748,258)(93,810,639 - 93,811,750)
sequence
gaattctctatgtagcccaagctgcccttaaactcagaaatccacttgcc
tcagcttcctaagtgttgggattacaacagtttataatgatcctcttggg
gaaactcaaagcagcaggaaagacctgttttttgaaagttttcctagagc
taactcaggaccaacaactggattccacctcttacagattcaattacttc
ccagtccttggattctaggaaccaaacctccaatcacatgaaactttgag
tcactatgacatattacatacaaatgatagcactggcactttgaaatcat
gaatactcattcatgggtgagagaaccttaacatcttgaaaaactaaaac
taaaatagtgctttaaaacaaacaaacaaacaaaaccaagatacagaaag
atatagttaataaaataatatgagggaagttaagtgggaggtagttattt
tgtatactctgatatgatctgataaaaagcatctatggttatctttttaa
aacatattacagttgaatgaaaagaaaacatatacaaaactcacttgaga
gcgtatcttaaaaaatacttgatcaataacctctgaaagcattaaaacta
gaaggaggatgaggaggaagaggagacagagtaggaggagggggagaagg
actacaaaaacaaagaaactattccagacaagagtagactatgaagacat
gacaaatgcagtgtcatagctataatcaatccttgttcagaaagacacca
taaat
gaattcagaaaaagatgaggtgagattttaggaggttatgtgtgaacaga
aaatttaagtgaacagtggactttttccacagtgaaagctgtcttttact
aaaataaacctaccatacattatttgcttagctacagggtcttcactttt
tttataaaagaactaggggagtgttctgtcaatgtgaaaggaagctctgc
tcaaatttgtacatgaaaacaggaacaaaaattttaaaaacatgaaaaga
aagaaaaagaaatacaactacttcaaagtactcccttctctggtctgaca
gtttgaatgttcctataaaggatgacaaaatgagctttatcttttaaatg
aatgtattgacctgaacatatatgaaggccttgctggctaaatgaagaaa
tttggagttgtatctatccagtgatgtttttctttctcagatatttcaat
attccccccccccacaaatcaagagtggagcatgacaagctgagaaatgc
aggttgaggtaatttactaggctagaatcctattgtcacagaagaaaagt
ccatcaaattaatgaggcccatggagacccaggaggctatggtcaatcag
aagcctgccttagtgtgtttcacacgtgctgtgtgcagcctggcaggtct
tttttgtttgtgtctctggcaaccaaactttccaggaaacagatcaccac
catgtgttcttcccaccacatggttagatgttcaagaagcaaacattcta
aagctcaaagtctcattttactctacaccaatcaggtgacaggtaatgct
acagttggttagcttatctgtattgtgttttggaggttctttttaaaaca
taagacagcatcaagagtcagaagaaaaggattctcctattcagttgttt
ttttttttcattccttttaacagtgagtagcctctctatacttctgtctc
ccttaggtaaaataatagattgactatcatgtaccgctccaatgttccaa
tcaaatatcttggtaggctcagcctatggtttagcacacctgcatttagg
actgagcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_93747504_93748258
seq2: B6Ng01-130N04.b_47_801

seq1  GAATTCTCTATGTAGCCCAAGCTGCCCTTAAACTCAGAAATCCACTTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATGTAGCCCAAGCTGCCCTTAAACTCAGAAATCCACTTGCC  50

seq1  TCAGCTTCCTAAGTGTTGGGATTACAACAGTTTATAATGATCCTCTTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTCCTAAGTGTTGGGATTACAACAGTTTATAATGATCCTCTTGGG  100

seq1  GAAACTCAAAGCAGCAGGAAAGACCTGTTTTTTGAAAGTTTTCCTAGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCAAAGCAGCAGGAAAGACCTGTTTTTTGAAAGTTTTCCTAGAGC  150

seq1  TAACTCAGGACCAACAACTGGATTCCACCTCTTACAGATTCAATTACTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCAGGACCAACAACTGGATTCCACCTCTTACAGATTCAATTACTTC  200

seq1  CCAGTCCTTGGATTCTAGGAACCAAACCTCCAATCACATGAAACTTTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCCTTGGATTCTAGGAACCAAACCTCCAATCACATGAAACTTTGAG  250

seq1  TCACTATGACATATTACATACAAATGATAGCACTGGCACTTTGAAATCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATGACATATTACATACAAATGATAGCACTGGCACTTTGAAATCAT  300

seq1  GAATACTCATTCATGGGTGAGAGAACCTTAACATCTTGAAAAACTAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACTCATTCATGGGTGAGAGAACCTTAACATCTTGAAAAACTAAAAC  350

seq1  TAAAATAGTGCTTTAAAACAAACAAACAAACAAAACCAAGATACAGAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAGTGCTTTAAAACAAACAAACAAACAAAACCAAGATACAGAAAG  400

seq1  ATATAGTTAATAAAATAATATGAGGGAAGTTAAGTGGGAGGTAGTTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTTAATAAAATAATATGAGGGAAGTTAAGTGGGAGGTAGTTATTT  450

seq1  TGTATACTCTGATATGATCTGATAAAAAGCATCTATGGTTATCTTTTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACTCTGATATGATCTGATAAAAAGCATCTATGGTTATCTTTTTAA  500

seq1  AACATATTACAGTTGAATGAAAAGAAAACATATACAAAACTCACTTGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATTACAGTTGAATGAAAAGAAAACATATACAAAACTCACTTGAGA  550

seq1  GCGTATCTTAAAAAATACTTGATCAATAACCTCTGAAAGCATTAAAACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTATCTTAAAAAATACTTGATCAATAACCTCTGAAAGCATTAAAACTA  600

seq1  GAAGGAGGATGAGGAGGAAGAGGAGACAGAGTAGGAGGAGGGGGAGAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGGATGAGGAGGAAGAGGAGACAGAGTAGGAGGAGGGGGAGAAGG  650

seq1  ACTACAAAAACAAAGAAACTATTCCAGACAAGAGTAGACTAAGAAGACAT  700
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ACTACAAAAACAAAGAAACTATTCCAGACAAGAGTAGACTATGAAGACAT  700

seq1  GACAAATGCAGTGTCATAGCTATAATCAATCCTTGTTACAG-AAGACACC  749
      ||||||||||||||||||||||||||||||||||||| ||| ||||||||
seq2  GACAAATGCAGTGTCATAGCTATAATCAATCCTTGTT-CAGAAAGACACC  749

seq1  ATAAAT  755
      ||||||
seq2  ATAAAT  755

seq1: chr17_93810639_93811750
seq2: B6Ng01-130N04.g_67_1126 (reverse)

seq1  ACTGCTCTAGTCCTAAAATTGCAAGTGTGTGCTATAACACTAGGCTAGAC  50
      ||||||| |||||||||  ||||   |||||||| |||  |||||| || 
seq2  ACTGCTC-AGTCCTAAA--TGCA--GGTGTGCTA-AACCATAGGCT-GAG  43

seq1  CCTACTTCAAAGAATTAATTTTTGTACTTGGAACAATTTTGGAGCTGTAT  100
      |||||  |||       || ||||   ||||||||   ||||||| ||| 
seq2  CCTAC--CAA------GATATTTG--ATTGGAACA---TTGGAGCGGTAC  80

seq1  ACAATGGATAGTCAATTCTATTTATTTTTTTACCTAAGAGGAGACAGAAG  150
      |     ||||||||     || |||| ||||||||||| |||||||||||
seq2  A----TGATAGTCA-----ATCTATTATTTTACCTAAG-GGAGACAGAAG  120

seq1  TATAGAGAGGCTAACTCACTTGTTAAAAAGGAAAATGGAAAAAAAAAAAA  200
      |||||||||||| |||||| |||||||| |   ||||   ||||||||||
seq2  TATAGAGAGGCT-ACTCAC-TGTTAAAAGG---AATG---AAAAAAAAAA  162

seq1  ACACTAGATTAGGAGAATCCTTTTTCTTTCTGACTTCTTGATGCTGTCTT  250
      |||   || |||||||||||||||   ||||||| |||||||||||||||
seq2  ACAACTGAATAGGAGAATCCTTTT--CTTCTGAC-TCTTGATGCTGTCTT  209

seq1  ATGTTTTTAAAAAAGATACTTCCAAAAACCACAATACAGAATAAGCTAAC  300
      |||||||  ||||||| || |||||||  |||||||||| ||||||||||
seq2  ATGTTTT--AAAAAGA-ACCTCCAAAA--CACAATACAG-ATAAGCTAAC  253

seq1  CAACTGTAGCATTAACCTGTTCACCCTGATTGGTGTAGAGTTAAAATGAG  350
      ||||||||||||| ||||| ||| |||||||||||||||| |||||||||
seq2  CAACTGTAGCATT-ACCTG-TCA-CCTGATTGGTGTAGAG-TAAAATGAG  299

seq1  ACTTTTGAGCTTTAGAATGTTTGCTTCTTGAACATCTAACCATGTGGTGG  400
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AC-TTTGAGCTTTAGAATGTTTGCTTCTTGAACATCTAACCATGTGGTGG  348

seq1  GAAGAACACATGGTGGTGATCTGTTTCCTGGAAAGTTTGGTTGCCAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAACACATGGTGGTGATCTGTTTCCTGGAAAGTTTGGTTGCCAGAGA  398

seq1  CACAAACAAAAAAGACCTGCCAGGCTGCACACAGCACGTGTGAAACACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACAAAAAAGACCTGCCAGGCTGCACACAGCACGTGTGAAACACAC  448

seq1  TAAGGCAGGCTTCTGATTGACCATAGCCTCCTGGGTCTCCATGGGCCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCAGGCTTCTGATTGACCATAGCCTCCTGGGTCTCCATGGGCCTCA  498

seq1  TTAATTTGATGGACTTTTCTTCTGTGACAATAGGATTCTAGCCTAGTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTGATGGACTTTTCTTCTGTGACAATAGGATTCTAGCCTAGTAAA  548

seq1  TTACCTCAACCTGCATTTCTCAGCTTGTCATGCTCCACTCTTGATTTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTCAACCTGCATTTCTCAGCTTGTCATGCTCCACTCTTGATTTGTG  598

seq1  GGGGGGGGGAATATTGAAATATCTGAGAAAGAAAAACATCACTGGATAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGGAATATTGAAATATCTGAGAAAGAAAAACATCACTGGATAGA  648

seq1  TACAACTCCAAATTTCTTCATTTAGCCAGCAAGGCCTTCATATATGTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACTCCAAATTTCTTCATTTAGCCAGCAAGGCCTTCATATATGTTCA  698

seq1  GGTCAATACATTCATTTAAAAGATAAAGCTCATTTTGTCATCCTTTATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAATACATTCATTTAAAAGATAAAGCTCATTTTGTCATCCTTTATAG  748

seq1  GAACATTCAAACTGTCAGACCAGAGAAGGGAGTACTTTGAAGTAGTTGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTCAAACTGTCAGACCAGAGAAGGGAGTACTTTGAAGTAGTTGTA  798

seq1  TTTCTTTTTCTTTCTTTTCATGTTTTTAAAATTTTTGTTCCTGTTTTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTCTTTCTTTTCATGTTTTTAAAATTTTTGTTCCTGTTTTCAT  848

seq1  GTACAAATTTGAGCAGAGCTTCCTTTCACATTGACAGAACACTCCCCTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAATTTGAGCAGAGCTTCCTTTCACATTGACAGAACACTCCCCTAG  898

seq1  TTCTTTTATAAAAAAAGTGAAGACCCTGTAGCTAAGCAAATAATGTATGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTATAAAAAAAGTGAAGACCCTGTAGCTAAGCAAATAATGTATGG  948

seq1  TAGGTTTATTTTAGTAAAAGACAGCTTTCACTGTGGAAAAAGTCCACTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTATTTTAGTAAAAGACAGCTTTCACTGTGGAAAAAGTCCACTGT  998

seq1  TCACTTAAATTTTCTGTTCACACATAACCTCCTAAAATCTCACCTCATCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTAAATTTTCTGTTCACACATAACCTCCTAAAATCTCACCTCATCT  1048

seq1  TTTTCTGAATTC  1112
      ||||||||||||
seq2  TTTTCTGAATTC  1060